mRNA_Ecto-sp13_S_contig1893.5990.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1893.5990.1 vs. uniprot
Match: D8LQE5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE5_ECTSI) HSP 1 Score: 813 bits (2099), Expect = 1.290e-294 Identity = 404/423 (95.51%), Postives = 414/423 (97.87%), Query Frame = 2
Query: 5 MSSGRRLARALMAVSTFLRAPWGVSPAVKATINARPRPPAASTWSGYHRSSSCGGRGVTAVRQRAVATGSGEAAVLSEPVDVKVEDASKNAAEGVEVSQQEVLTREAWMERAEAHRERVRSLTNGSVHHDENDPIFNFLFEYYHFKPRMLLQWTPGFDVYLLDADPSLKGSPLPQKAWESGPGAGGSYNPFGLDNNRRVQVQWMRDLLQATTSRAPVLHCFGLHEWAMLYRPRGAEEAGIDARSVHQTLPLRVPQHEINAMVEGRGGALACTHFDAFRFFTPEAKPLNPVQLERVGQKSNDQPGCVHANMDLFKWALRLWPLLPSEKLADALELAVSCRMLDMRASPYDLTAHGKVPDTVVGRGGGKVGSLPPEAWDPTPVRIETEEGRKEYQQAQAELYQRSMPVRRSLMRHMDRLLDVWGR 1273
MSS RRLARALMAVSTFLRAPWGVS AVKATINARPRPP ASTWSGYHRSSSCGGRGVTAVRQRAVATGSGEAAVLSEPVDV+VEDASK+AAEGVEVSQ+EVL+REAWM RAEAHR+RVRSLTNGSVHHD++DPIFNFLFEYYHFKPRMLLQWTPGFD YLLDADPSLKG PLPQKAWESGPGAGGSYNPFGLDNNRRVQVQWMRDLLQATTSRAPVLHCFGLHEWAMLYRPRGAEEAGIDARSVHQTLPLRV Q EINAMVEGRGGALACTHFDAFRFFTPEAKPLNPVQLERVGQ+SNDQPGCVHANMDLFKWALRLWPLLPSEKLA+ALELAVSCRMLDMRASPYDLTAHGKVPDTVVGRGGG+VG LPPEAWDPTPVRIETEEGRKEYQQAQAELYQRSMPVRRSLMRHMDRLLDVWGR
Sbjct: 1 MSSARRLARALMAVSTFLRAPWGVSLAVKATINARPRPPGASTWSGYHRSSSCGGRGVTAVRQRAVATGSGEAAVLSEPVDVRVEDASKSAAEGVEVSQREVLSREAWMARAEAHRKRVRSLTNGSVHHDKSDPIFNFLFEYYHFKPRMLLQWTPGFDAYLLDADPSLKGCPLPQKAWESGPGAGGSYNPFGLDNNRRVQVQWMRDLLQATTSRAPVLHCFGLHEWAMLYRPRGAEEAGIDARSVHQTLPLRVSQDEINAMVEGRGGALACTHFDAFRFFTPEAKPLNPVQLERVGQRSNDQPGCVHANMDLFKWALRLWPLLPSEKLANALELAVSCRMLDMRASPYDLTAHGKVPDTVVGRGGGRVGGLPPEAWDPTPVRIETEEGRKEYQQAQAELYQRSMPVRRSLMRHMDRLLDVWGR 423
BLAST of mRNA_Ecto-sp13_S_contig1893.5990.1 vs. uniprot
Match: A0A7S0D3Z9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0D3Z9_9EUKA) HSP 1 Score: 248 bits (632), Expect = 2.120e-73 Identity = 135/314 (42.99%), Postives = 188/314 (59.87%), Query Frame = 2
Query: 326 WMERAEAHRERVRSLTNGSVHH----DENDPIFNFLFEYYHFKPRMLLQWTPGFDVYLLDA---DPSLKGSPLPQKAWESGPGAGGSYNPFGLDNNRRVQ-VQWMRDLLQATTSRAPVLHCFGLHEWAMLYRPRGAEEAGIDARSVHQTLPLRVPQHEINAMVEGRGGALACTHFDAFRFFTPEAKPLNPVQLERVGQKSNDQPGCVHANMDLFKWALRLWPLLPSEKLADALELAVSCRMLDMRASPYDLTAHGKVPDTVVGRGGGKVGSLPPEAWDPTPVRIETEEGRKEYQQAQAELYQRSMPVRRSLMRH 1243
W AE + R+ L G + + PI+NF+FEYY FKP+MLLQ++PG V L A DP+L +W G++ L N+ V+ ++W RDLL+ T R P LHC+GLHEWAMLY P ++E +Q++PLRV Q +N++++ GG + CTHFDAFRFFT +A P N VQL R Q++ +QPGC+HANMDLFKW ++L P +PS L D L LA+ R+LDMRASPYD+ G E +D +P+ IET EGR EY++ QAEL++++ P+R L+ +
Sbjct: 98 WRREAEKEQARMLELLGGEMRSKNGKSRHHPIYNFIFEYYMFKPKMLLQYSPGLGVRLEGAQPGDPALSSRGFSHDSW-------GAWADPSLAKNKTVESLRWTRDLLKTTVDRKPELHCYGLHEWAMLYHPAESKEK---PPHKYQSIPLRVSQETVNSVIDREGG-IRCTHFDAFRFFTKDASPKNNVQLSREQQQAYEQPGCLHANMDLFKWTIKLSPWVPSSMLQDTLRLAIQARVLDMRASPYDVEGMG-------------------EGFDLSPIAIETLEGRAEYKRLQAELWKQAGPIRERLVEY 381
BLAST of mRNA_Ecto-sp13_S_contig1893.5990.1 vs. uniprot
Match: A0A0M0J9Y2_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J9Y2_9EUKA) HSP 1 Score: 240 bits (613), Expect = 3.610e-71 Identity = 145/328 (44.21%), Postives = 195/328 (59.45%), Query Frame = 2
Query: 308 VLTREAWMERAEAHRERVRSLTNGSVHHDENDPIFNFLFEYYHFKPRMLLQWTPGFDVYLLDADPSLKGSPLPQKAWESGPG------AGGSYNPFGLDNNRRVQVQWMRDLLQATTSRAPVLHCFGLHEWAMLYRPRGAEEAGIDARSVHQTLPLRVPQHEINAMVEGRGGALACTHFDAFRFFTPEAKPLNPVQL--ERVGQKSNDQPGCVHANMDLFKWALRLWPLLPSEKLADALELAVSCRMLDMRASPYDLTAHGKVPDTVVGRGGGKVGSLPPEAWDPTPVRIETEEGRKEYQQAQAELYQRSMPVRRSLMRHMDRLLDVW 1267
V+ W + AEAHR R+ SL GS++ D ++PI+NF+F YY F ++LL+++PG V LKG + ++ +G G +P + R +++AT+ RAP L+C+GLHEWAMLY+P G+ S +Q LPLRV Q E+NA+VE LACTHFDAFRFFT A PLN + R Q +QPGCVHA+MDLF+++L+LWP LP+E LAD LELA++ R+LDMRASPYDL+ GG GS D +PVRIET EGRK YQ+ Q+ L + P+R L+R D + VW
Sbjct: 13 VIDAPIWRDAAEAHRARMLSLIGGSLNVDLSNPIYNFIFVYYSFDQKLLLRYSPGAGVV-------LKGVGVKEEDLWTGRGYVSYGDGSARMDPMLCKPSMRNGAVTAASIMRATSGRAPHLNCYGLHEWAMLYQPPGST----CHLSKYQELPLRVSQAELNAVVESM--PLACTHFDAFRFFTAPATPLNTISPTPSRATQAQLEQPGCVHASMDLFRYSLKLWPWLPAELLADTLELAIASRVLDMRASPYDLSQWQ----------GGAAGSF-----DLSPVRIETAEGRKLYQREQSRLASWAQPLRARLLREYDSAIAVW 312
BLAST of mRNA_Ecto-sp13_S_contig1893.5990.1 vs. uniprot
Match: A0A3M2L419_9NOCA (3-methyladenine DNA glycosylase n=2 Tax=Nocardia stercoris TaxID=2483361 RepID=A0A3M2L419_9NOCA) HSP 1 Score: 225 bits (574), Expect = 5.180e-66 Identity = 138/319 (43.26%), Postives = 173/319 (54.23%), Query Frame = 2
Query: 311 LTREAWMERAEAHRERVRSLTNGSVHH---DENDPIFNFLFEYYHFKPRMLLQWTPGFDVYLLDADPSLKGSPLPQKAWESGPGAGGSYNPFGLDNNRRVQVQWMRDLLQATTSRAPVLHCFGLHEWAMLYRPRGAEEAGIDARSVHQTLPLRVPQHEINAMVEGRGGALACTHFDAFRFFTPEAKPLNPVQLERVGQKSNDQPGCVHANMDLFKWALRLWPLLPSEKLADALELAVSCRMLDMRASPYDLTAHGKVPDTVVGRGGGKVGSLPPEAWDPTPVRIETEEGRKEYQQAQAELYQRSMPVRRSLMRHMDRLL 1258
L +E W RA AHRERV L V P+ +FLF YY KP L +W PGF V L A + + GP + +P LD RR V+++ LL+AT SR P L CFGLHEWAM+YR H+ +PLR+ +A+VE +L CTHFDA+RFFTP+A P N + L R GQ +QPGC+HANMDL+KW +L PL+ SE L D ELA + R LDMRASPYDL+A G TPVRIET GR EY +AQAEL + P+R L+ +RL+
Sbjct: 4 LPQEEWRARAAAHRERVAELIGAHVERRATGAKHPVVDFLFTYYGHKPAQLRRWHPGFGVALAGAQEYAGSRGYHEVSTTGGPAW--TADPAFLDR-RRPTVEFVATLLRATASRPPQLSCFGLHEWAMVYRTDEVR---------HEQVPLRLGAAGTDAVVESM--SLRCTHFDAYRFFTPDAVPRNTLPLTRAGQPDREQPGCLHANMDLYKWGFKLVPLIDSELLLDCFELACAARELDMRASPYDLSALGY-----------------------TPVRIETASGRAEYARAQAELADHAAPLRARLLAAAERLV 285
BLAST of mRNA_Ecto-sp13_S_contig1893.5990.1 vs. uniprot
Match: A0A8J5Y100_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5Y100_DIALT) HSP 1 Score: 226 bits (575), Expect = 4.340e-65 Identity = 141/331 (42.60%), Postives = 178/331 (53.78%), Query Frame = 2
Query: 308 VLTREAWMERAEAHRERVRSL--TNGSVHHDENDPIFNFLFEYYHFKPRMLLQWTPGFDVYLLDADPSLKGSPLPQKAWESGP-GAGGSYNPFGLDNNRRVQVQWMRDLLQATTSRAPVLHCFGLHEWAMLYRPRGAEEAGIDARSVHQT-LPLRVPQHEINAMVEGRGGALACTHFDAFRFFTPEAKPLNPV-QLERVGQKSNDQPGCVHANMDLFKWALRLWPLLPSEKLADALELAVSCRMLDMRASPYDL----------------TAHGKVPDTVVGRGGGKVGSLPPEAWDPTPVRIETEEGRKEYQQAQAELYQRSMPVRRSLM 1237
VL R W+ AEAH RV S + + +D DP+ NF+F+YYH KP L W PG DV + + G +P + W G+ Y +RV + +L+A R P L C GLHEWAMLY P A AG+ HQ LPLRV Q E+NA VE L CTHFDAFRFF PEA+PLN L R Q + +QPGCVHA MDLFKWALR P + + + + L LA+ R+LDMRASPYDL A G + T RGG + L E P+RIE+ +GR EY+ Q LY+ S PVR +++
Sbjct: 33 VLERAEWLPLAEAHSARVASALGVSSTFEYDRADPLRNFVFQYYHLKPSQLRVWCPGPDVAMRGVTSADFGKLVPHERWARAVHGSATLYPAEAAPEQQRVAMTSALAVLRAAAGREPHLLCHGLHEWAMLYHPASAAAAGVPPPPRHQGGLPLRVSQAELNACVESL--PLRCTHFDAFRFFAPEARPLNREGPLSRARQAALEQPGCVHATMDLFKWALRALPFIDAALVPETLALALKARVLDMRASPYDLGAWDAHAASARAFPPAAAGGAMTSTTRTRGGRTLAPLSVEHL--APIRIESRDGRDEYRAYQLALYEESRPVRAAMI 359
BLAST of mRNA_Ecto-sp13_S_contig1893.5990.1 vs. uniprot
Match: A0A3N1D5H6_9ACTN (Uncharacterized protein n=1 Tax=Actinocorallia herbida TaxID=58109 RepID=A0A3N1D5H6_9ACTN) HSP 1 Score: 222 bits (565), Expect = 1.070e-64 Identity = 133/316 (42.09%), Postives = 174/316 (55.06%), Query Frame = 2
Query: 326 WMERAEAHRERVRSLTNGSV---HHDENDPIFNFLFEYYHFKPRMLLQWTPGFDVYLLDADPSLKGSPLPQKAWESGPGAGGSYNPFGLDNNRRVQVQWMRDLLQATTSRAPVLHCFGLHEWAMLYRPRGAEEAGIDARSVHQTLPLRVPQHEINAMVEGRGGALACTHFDAFRFFTPEAKPLNPVQLERVGQKSNDQPGCVHANMDLFKWALRLWPLLPSEKLADALELAVSCRMLDMRASPYDLTAHGKVPDTVVGRGGGKVGSLPPEAWDPTPVRIETEEGRKEYQQAQAELYQRSMPVRRSLMRHMDRLLDV 1264
W R EAHR R+ + G + + P+ +FLF YY +P LL W PG V L+G+ +A+ P G + + L R + W RDLL AT SR P L CFG+HEWAM+YR G EE H PLR+P E+ A+VE RG + C+HFDAFRFFTP A+PLN +Q R GQ+ +QPGC+HANMDL+KWA +L PL+P+E + D LA R +DMRASPYD+ A G P +R+ET EGR EY Q + R+ P+R +L+ H DRLL +
Sbjct: 14 WRARREAHRARLEGMIGGYLALRRAGRSHPVEDFLFTYYGHRPGRLLTWHPGAGVV-------LEGARDFGQAYRDTP-EGTTLDLEALLPKRAKSLAWTRDLLAATASRQPHLGCFGMHEWAMVYR-LGQEEVR------HAAWPLRLPPGEVAAVVEQRG--VRCSHFDAFRFFTPPARPLNVLQPTREGQRDQEQPGCLHANMDLYKWAYKLSPLIPAELVVDCFALAREIRSVDMRASPYDMAALGHPP-----------------------IRVETAEGRAEYAARQRDFAARAEPLRAALVGHCDRLLSL 289
BLAST of mRNA_Ecto-sp13_S_contig1893.5990.1 vs. uniprot
Match: UPI000A9BE976 (3-methyladenine DNA glycosylase n=1 Tax=Nocardia harenae TaxID=358707 RepID=UPI000A9BE976) HSP 1 Score: 223 bits (569), Expect = 1.410e-64 Identity = 135/324 (41.67%), Postives = 185/324 (57.10%), Query Frame = 2
Query: 311 LTREAWMERAEAHRERVRSLTNGSVHH---DENDPIFNFLFEYYHFKPRMLLQWTPGFDVYLLDADP--SLKGSPLPQKAWESGPGAGGSYNPFGLDNNRRVQ-VQWMRDLLQATTSRAPVLHCFGLHEWAMLYRPRGAEEAGIDARSVHQTLPLRVPQHEINAMVEGRGGALACTHFDAFRFFTPEAKPLNPVQLERVGQKSNDQPGCVHANMDLFKWALRLWPLLPSEKLADALELAVSCRMLDMRASPYDLTAHGKVPDTVVGRGGGKVGSLPPEAWDPTPVRIETEEGRKEYQQAQAELYQRSMPVRRSLMRHMDRLLDV 1264
L R AW+E A AHR+R+ +L + E P+ +FLF YY KP L +W PGF V L D+ +++G P A G++ RR+ V+++ DLL+AT +R P L CFGLHEWAM+YR A PLR+ + + +VE L CTH+DA+RFFTP+A P N + L R Q + +QPGC+HA MDL+KWA +L PLLPS + DA ELA + R LDMRASPYDL+A+G TPV IET GR +Y +AQA+L +R++P+R++L+ H +RLL+V
Sbjct: 45 LPRAAWLELAAAHRDRIEALVGPYLRRRAAGEKHPVLDFLFTYYGHKPGRLRRWHPGFGVSLADSPDYAAVRGYHQP---------APGTHTADPAFLARRLDTVRFVADLLRATAARQPRLSCFGLHEWAMVYRTDDLRHAA----------PLRLGRTGTDRVVETLD--LRCTHYDAYRFFTPDAVPRNELPLTRADQVAREQPGCLHAGMDLYKWAFKLTPLLPSPLVLDAFELACAARELDMRASPYDLSAYGY-----------------------TPVPIETPSGRADYVRAQADLARRALPLRQALLEHCERLLEV 324
BLAST of mRNA_Ecto-sp13_S_contig1893.5990.1 vs. uniprot
Match: UPI001CD33675 (3-methyladenine DNA glycosylase n=2 Tax=Saccharopolyspora TaxID=1835 RepID=UPI001CD33675) HSP 1 Score: 221 bits (564), Expect = 1.550e-64 Identity = 137/322 (42.55%), Postives = 177/322 (54.97%), Query Frame = 2
Query: 308 VLTREAWMERAEAHRERVRSLTNGSVHHD---ENDPIFNFLFEYYHFKPRMLLQWTPGFDVYLLDADPSLKGSPLPQKAWESGPGAGGSYNPFGLDNNRRVQVQWMRDLLQATTSRAPVLHCFGLHEWAMLYRPRGAEEAGIDARSVHQTLPLRVPQHEINAMVEGRGGALACTHFDAFRFFTPEAKPLNPVQLERVGQKSNDQPGCVHANMDLFKWALRLWPLLPSEKLADALELAVSCRMLDMRASPYDLTAHGKVPDTVVGRGGGKVGSLPPEAWDPTPVRIETEEGRKEYQQAQAELYQRSMPVRRSLMRHMDRLLDV 1264
VL + W +RA AHRERV T E P+ +FLF YY +P +L +W PGF V L L+ ++ + P G + +P L RR V+++ LL A SR+P L CFGLHEWAM+YR D R H++ PLR+ +A+VE + CTH DAFRFFTP A+PLN +Q R Q + +QPGC+H NMDLFKWA +L PL+P+E +AD ELAV R LDMRASPYDL A G P V +ET EGR Y +AQ E +R+ P+R L+ H +RLL V
Sbjct: 3 VLGEQEWRDRANAHRERVERWTGPHRRRQRAGEKHPVMDFLFTYYSHRPSLLERWQPGFGVALEGGAEFLE-----RRGYRRVP-EGVALDPAVLTAKRRESVRFVHGLLTAVRSRSPQLGCFGLHEWAMVYRTSPG-----DVR--HESWPLRLGHAGTDAVVESM--PIKCTHHDAFRFFTPPARPLNALQPAREDQVALEQPGCLHGNMDLFKWAYKLDPLVPAELVADCFELAVDIRELDMRASPYDLAALGYPP-----------------------VAVETPEGRAAYVRAQREFAERAAPLRDRLVEHCERLLAV 286
BLAST of mRNA_Ecto-sp13_S_contig1893.5990.1 vs. uniprot
Match: A0A2W4JFU3_9ACTN (3-methyladenine DNA glycosylase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A2W4JFU3_9ACTN) HSP 1 Score: 221 bits (562), Expect = 4.130e-64 Identity = 137/325 (42.15%), Postives = 177/325 (54.46%), Query Frame = 2
Query: 308 VLTREAWMERAEAHRERVRSLTNGSVH---HDENDPIFNFLFEYYHFKPRMLLQWTPGFDVYLLDADPSLKGSPLPQKAWESGPGAGGSYNPFGLDNNRRVQVQWMRDLLQATTSRAPVLHCFGLHEWAMLYRPRGAEEAGIDARSVHQTLPLRV-PQHEINAMVEGRGGALACTHFDAFRFFTPEAKPLNPVQLERVGQKSNDQPGCVHANMDLFKWALRLWPLLPSEKLADALELAVSCRMLDMRASPYDLTAHGKVPDTVVGRGGGKVGSLPPEAWDPTPVRIETEEGRKEYQQAQAELYQRSMPVRRSLMRHMDRLLDVWG 1270
VL + W R +AHR RV + H P+ +FLF YY ++P L +W PG V L+DADP+ G +A + G + + R V W+R LL T +R P L CF LHEWAM+YR R E H PLR+ P+ + E R L C+HFDAFRFFTPEA+PLN QL R GQ N+QPGC+HANMDL+K+A +L PL+PSE +A+A LA R LDMRASPYDL+A G +PVRIET EGR EY AQ + +R+ P+R L+ +DR+ + G
Sbjct: 13 VLDPDTWRARRDAHRARVDRWLAEHLERRRHGRKHPVEDFLFTYYSYRPGQLRRWHPGAGVLLVDADPAEFGRDY--RAVDGG----AMLDATAILQRRGQSVAWIRTLLANTAARRPQLSCFNLHEWAMVYRQRPEELR-------HAGWPLRLGPERTARVVEELR---LRCSHFDAFRFFTPEARPLNQRQLSREGQLENEQPGCLHANMDLYKYAYKLCPLIPSELVAEAFALAREIRALDMRASPYDLSALGY-----------------------SPVRIETPEGRAEYVAAQRDFAERAAPLRARLIEAIDRVTALAG 298
BLAST of mRNA_Ecto-sp13_S_contig1893.5990.1 vs. uniprot
Match: UPI0018F14E5F (3-methyladenine DNA glycosylase n=1 Tax=Qaidamihabitans albus TaxID=2795733 RepID=UPI0018F14E5F) HSP 1 Score: 218 bits (555), Expect = 3.590e-63 Identity = 132/316 (41.77%), Postives = 169/316 (53.48%), Query Frame = 2
Query: 326 WMERAEAHRERVRSLTNGSVHH---DENDPIFNFLFEYYHFKPRMLLQWTPGFDVYLLDADPSLKGSPLPQKAWESGPGAGGSYNPFGLDNNRRVQVQWMRDLLQATTSRAPVLHCFGLHEWAMLYRPRGAEEAGIDARSVHQTLPLRVPQHEINAMVEGRGGALACTHFDAFRFFTPEAKPLNPVQLERVGQKSNDQPGCVHANMDLFKWALRLWPLLPSEKLADALELAVSCRMLDMRASPYDLTAHGKVPDTVVGRGGGKVGSLPPEAWDPTPVRIETEEGRKEYQQAQAELYQRSMPVRRSLMRHMDRLLDV 1264
W+ R AH R+R T E P+ +FLF YY P L +W PG V L A PS + + W G + +P R +++R LL+AT R+P L CFGLHEWAM+YR E H LPLR+ + +VE G + C HFDAFRFFTP A+PLN +Q R Q+ +QPGC+HANMDL+KWA +L PL+P+E L D ELA R+LDMRASPYDL++ G +PVRIET EGR EY +AQAE R+ P+R L++H LL V
Sbjct: 10 WLARERAHAARMRRWTEPHQRRRSRGEKHPVLDFLFTYYWHPPAQLERWQPGPGVVL--AGPSARR--FLDRRWYREVDGGVALDPAAFTAKRERTARYVRALLEATAGRSPRLSCFGLHEWAMVYRQPQEEVR-------HAQLPLRLGAAGTDVVVEDLG--VRCGHFDAFRFFTPPARPLNRLQPTRQTQRDFEQPGCLHANMDLYKWAYKLGPLVPAELLGDCFELAAEVRLLDMRASPYDLSSFGH-----------------------SPVRIETAEGRAEYARAQAEFAHRAAPLRNQLVQHCRSLLGV 289 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1893.5990.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1893.5990.1 >prot_Ecto-sp13_S_contig1893.5990.1 ID=prot_Ecto-sp13_S_contig1893.5990.1|Name=mRNA_Ecto-sp13_S_contig1893.5990.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=424bp MSSGRRLARALMAVSTFLRAPWGVSPAVKATINARPRPPAASTWSGYHRSback to top mRNA from alignment at Ecto-sp13_S_contig1893:3186..9099- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1893.5990.1 ID=mRNA_Ecto-sp13_S_contig1893.5990.1|Name=mRNA_Ecto-sp13_S_contig1893.5990.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5914bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1893:3186..9099- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1893:3186..9099- >mRNA_Ecto-sp13_S_contig1893.5990.1 ID=mRNA_Ecto-sp13_S_contig1893.5990.1|Name=mRNA_Ecto-sp13_S_contig1893.5990.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1272bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1893:3186..9099- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |