mRNA_Ecto-sp13_S_contig18926.5989.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig18926.5989.1
Unique NamemRNA_Ecto-sp13_S_contig18926.5989.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig18926.5989.1 vs. uniprot
Match: A0A6H5L061_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L061_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 1.340e-92
Identity = 135/214 (63.08%), Postives = 163/214 (76.17%), Query Frame = 1
Query:  421 FRHPVSRLVSAYFYCKQKTRDELCATDVLSAQKTDLHTFAEHWGNYGLRQFALAFVGAEDVLSAELKRGNKARSLEFPGWYRLKEYFEGLHEAQQAETIAQMREDSNDLAMSHLLPPVEDLLRWNYSAVGILEQWETSMILFNTALEVPNFDWSAASPKIGRKNADEKFRAEEARVLRAAWDDPAIKNFLWLDLTLYDYAVSVHRKQAAEYGVI 1062
            ++ P+ RLVSAYFYCKQ   DELCA+ VL A  TDLHTFA+HWGNYGLRQF+LAFVGAEDV +AE +RG   R + FPGWYR+KEYFE   + +Q   + Q    SNDLAMS+LL PVEDLL  NYSAVGILE+WETSM LFN AL+VP+F+W  AS  +GRKN D++   EEA  LRAAWDDP +   LWLD+ LYD+AV+VH KQ  E+G++
Sbjct:   18 YKCPIPRLVSAYFYCKQNGWDELCASMVLKAGNTDLHTFAKHWGNYGLRQFSLAFVGAEDVFAAEQERGIDGRPVMFPGWYRVKEYFENQFDVEQERALMQETGASNDLAMSYLLQPVEDLLSRNYSAVGILEKWETSMTLFNKALKVPSFNWQTASRNLGRKNVDKRLHDEEAHALRAAWDDPVLAKTLWLDIFLYDHAVAVHNKQVEEHGIV 231          
BLAST of mRNA_Ecto-sp13_S_contig18926.5989.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI)

HSP 1 Score: 269 bits (688), Expect = 2.350e-85
Identity = 146/301 (48.50%), Postives = 189/301 (62.79%), Query Frame = 1
Query:  205 MGKAGGSTVKGLMDASIKHTHHTIGLYQNHQWMRGKESVKKGLETTKYTMTFGPYAEALRPHGG---SNCKWFTMFRHPVSRLVSAYFYCKQKTRDELCATDVL--SAQKTDLHTFAEHWGNYGLRQFALAFVGAEDVLSAELKRGNKARSLEF------PGWYRLKEYFEG-LHEAQQAETI----AQMREDSNDLAMSHLLPPVEDLLRWNYSAVGILEQWETSMILFNTALEVPNFDWSAASPKIGRKNADEKFRAEEARVLRAAWDDPAIKNFLWLDLTLYDYAVSVHRKQAAEYGV 1059
            M KAGGSTVK ++    K  + T+GLY + QW+ GK+  +  L      M +G Y E LRP GG     CKWFT+FRHP+ RLVSAYFYCK+K +D LCAT  L  +A  TDL+ FAEHWG++GLRQFALAFV  E++L+ ++K         +      PGWY LK Y +  L E +Q E            S    +SHLL PV++LL   Y+AVG+LEQWETS++LFN AL +P FDW      IG+KN+D  F  EEA +L  +W DP ++ +L LDL LYDYAVSVH +Q  +YG+
Sbjct:    1 MNKAGGSTVKYMLAPWTKAQNVTVGLYDSPQWLEGKDFAQDFLGDENSLM-WGAYTEGLRPFGGLGLRECKWFTIFRHPIPRLVSAYFYCKKKPQDGLCATVALDANADDTDLYAFAEHWGDFGLRQFALAFVLPEELLANKVKYDATGICTPYHGKRSCPGWYELKLYLQQQLDEQEQGEGSRGWDGSGAAASGAATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKKNSDGTFHNEEAEMLLRSWTDPRLRRYLSLDLLLYDYAVSVHNQQVDKYGL 300          
BLAST of mRNA_Ecto-sp13_S_contig18926.5989.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 1.840e-77
Identity = 130/320 (40.62%), Postives = 186/320 (58.13%), Query Frame = 1
Query:  124 VAAASSN-ITSSRLLKSPGTRKCWVFTHMGKAGGSTVKGLMDASIKHTHHTIGLYQNHQWMRGKESVKKGLETTKYTMTFGPYAEALRPHGGSNCKWFTMFRHPVSRLVSAYFYCKQKTRDELCATDVLSAQKTDLHTFAEHWGNYGLRQFALAFVGAEDVLSAEL-----KRGNKARSLEFPGWYRLKEYFEGLHEAQQAETIAQMREDSNDLAMSHLLPPVEDLLRWNYSAVGILEQWETSMILFNTALEVPNFDWSAASPKIGRKNAD-EKFRAEEARVLRAAWDDPAIKNFLWLDLTLYDYAVSVHRKQAAEYGVI 1062
            +A  S+N +  ++ LK      CWVF+HM K+GG TV+ ++   +     +  L+ + +W  G+   +  ++      T+G Y E LR +   +CKWFT+FRHPVSR+VSAYFYC++   D+LCA  VL A K DL TFAEHWGNYGLRQFALA + AEDV   E+     ++      +  P WYR K Y   LH   Q +     + +S    ++  L   ++ L   Y+AVGI+E+W+ SM LFN  L +  FDW     K G+KN+   +F       L+AAW  P +K F+WLD+ LYD+A+SVHR Q A+ G++
Sbjct:   30 IAMNSTNPVQGAQELKPTSKCDCWVFSHMNKSGGMTVRKMIMPFLTEKGVSTALFDDIEWSSGRSYAETFVKENA-VFTYGGYTEGLRMYDDRDCKWFTVFRHPVSRVVSAYFYCQRAHHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHNEVVSEFCQQARGHGDVCIPAWYRQKHY---LHLPHQDDFCGPTQPESG---LAQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSGKKNSGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGIV 342          
BLAST of mRNA_Ecto-sp13_S_contig18926.5989.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE)

HSP 1 Score: 234 bits (598), Expect = 1.360e-71
Identity = 128/316 (40.51%), Postives = 192/316 (60.76%), Query Frame = 1
Query:  124 VAAASSNITSSRLLKSPGTRKCWVFTHMGKAGGSTVKGLMDASIKHTHHTIGLYQNHQWMRGKESVKKGLETTKYTMTFGPYAEALRPHGGS-NCKWFTMFRHPVSRLVSAYFYCKQKTRDELCATDVLSAQKTDLHTFAEHWGNYGLRQFALAFVGAEDVLSAELKRGNKARSLEFPGWYRLKEYFEG-LHEAQQAETIAQM--REDSNDLAMSHLLPPVEDLLRWNYSAVGILEQWETSMILFNTALEVPNFDWSAASPKIGRKNADEKFRAEEARVLRAAWDDPAIKNFLWLDLTLYDYAVSVHRKQAAEYGV 1059
            +AAA+    S  L  SP    CWV+T M KAGG++++ ++      T+ T+G + + Q+  G   V++ L+  + ++ +G Y E LRP+     CKWFTM RHP++RLVSA+ YC     D+LCAT +   +  D++ FAEHWGN+G+ QFALAF    D+L  E+K          P WY+ K YFEG L  + +  T A +  ++   ++ M  +L PVE+LLR  Y+AVGILEQWETSM+LF+ AL++P F+W++ S     +N  +     +  +L A+  DP +K  LWLD+ LY++A SVH+ Q + YG+
Sbjct:   18 LAAANVGSDSPELSLSPPA--CWVYTDMNKAGGTSIRRMIKDYAAATNTTVGEFTHTQYNAGDRGVQQILDR-RPSLIWGAYTEGLRPYATVLGCKWFTMVRHPIARLVSAFNYCGIVPSDQLCATRIHKPEDGDIYDFAEHWGNHGVVQFALAFEDLNDILVTEVKS---------PPWYKAKLYFEGRLGPSGKTSTSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNWTSTSASSTPRNVHDSKAKND--LLVASMTDPVLKQILWLDILLYEHACSVHKAQLSRYGL 319          
BLAST of mRNA_Ecto-sp13_S_contig18926.5989.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE)

HSP 1 Score: 233 bits (593), Expect = 8.150e-71
Identity = 120/319 (37.62%), Postives = 180/319 (56.43%), Query Frame = 1
Query:  112 RVRGVAAASSNITSSRLLKSPGTRKCWVFTHMGKAGGSTVKGLMDASIKHTHHTIGLYQNHQWMRGKESVKKGLETTKYTMTFGPYAEALRPHGGSNCKWFTMFRHPVSRLVSAYFYCKQKTRDELCATDVLSAQKTDLHTFAEHWGNYGLRQFALAFVGAEDVLSAELKRGNKARSLEFPGWYRLKEYFEG---LHEAQQAETIAQMREDSNDLAMSHLLPPVEDLLRWNYSAVGILEQWETSMILFNTALEVPNFDWSAASPKIGRKNADEKFRAEEARVLRAAWDDPAIKNFLWLDLTLYDYAVSVHRKQAAEYGV 1059
            R+   A  + N+  +    S  T  CWVFTH  KAGG+TVK  +    +  + T+ L  +  + RG + ++  L   K  +  G YAE LR      CKWFTM RHP++RL+SA++YC    RD+LCA ++   +  D++ FA+HWGNY L QFAL  V   ++ + E+         + P W++ K YFEG           T     ++   + +  +L PVE+LLR NY+AVGILE W+ SM+LF+ ALE+P F+W+ AS  +  + +  K   E+  +L AA  DP ++ ++WLDL LY+YA S+H +Q   Y +
Sbjct:   12 RLALAACVTLNVGHTLPELSLSTPTCWVFTHNNKAGGTTVKTHLRNYAESRNETVALCHSDWYARGDKGIQD-LLNDKPVLIAGGYAEGLRTSAFQGCKWFTMMRHPIARLISAFYYCSGGNRDQLCAANIHKPEDGDIYDFAKHWGNYALLQFALGVVDQHEIFAEEV---------DAPAWFKAKLYFEGRLGYPGNMSTATNRTTHDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNWTVASASLSPRKSQNKI-VEKKAMLAAAMTDPVLRQYVWLDLLLYEYACSLHEEQLRRYDL 319          
BLAST of mRNA_Ecto-sp13_S_contig18926.5989.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 2.010e-65
Identity = 130/337 (38.58%), Postives = 192/337 (56.97%), Query Frame = 1
Query:  109 PRVRGVAAASSNITSSRLLKSPGTRKCWVFTHMGKAGGSTVKGLMDASIKHTHHTIGLYQNHQWMRGKE-SVKKGLETTK---YTMTFGPYAEALRPHG--GSNCKWFTMFRHPVSRLVSAYFYCKQKTRDELCATDVLSAQKTDLHTFAEHWGNYGLRQFALAFVGAEDVLSAELKRGNKARSL------EFPGWYRLKEYFE-------GLHEAQQAETIAQMREDSNDLAMSHLLPPVEDLLRWNYSAVGILEQWETSMILFNTALEVPNFDWSAASPKIGRKNADEKFRAEEARVLRAAWDDPAIKNFLWLDLTLYDYAVSVHRKQAAEYGVI 1062
            P  R   A+SS     R L SP   +CWVF H+ K GGSTVK ++  S    +    +Y ++QW  G + S   G++  +   + +  G Y EALR      + C++FT+FRHP++R+VSAYFYC+    D  CA++V+ A+  DL TFA+HWGN+ +RQFAL FV ++ V   E  R  +A++L      +  GWY+LK Y E       G+    +A T+      + +  +  LL P  DL+R  Y AVGILEQW T++ LF+ ALE+P   W A   + G++  D K +  E+  L+ AW D  +K ++ LDL LY++AV V  +QA  YG++
Sbjct:  132 PGARTSRASSSVAVPVRALASPD--QCWVFMHLQKCGGSTVKYMLRRSYGSRY---SIYDSNQWKLGDDISANFGVKLARGETWNVMAGGYTEALRRSEPVDAGCRFFTLFRHPIARMVSAYFYCRSTLGDAACASEVVDAKDVDLLTFAKHWGNFAVRQFALGFVPSDGV--QEYIRTPEAQALHDFDLKKIAGWYQLKMYLERPEKGDWGVPGQSEAMTVEHDAAATLEAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRLESETLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQARGYGLL 461          
BLAST of mRNA_Ecto-sp13_S_contig18926.5989.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 1.610e-61
Identity = 121/310 (39.03%), Postives = 170/310 (54.84%), Query Frame = 1
Query:  184 KCWVFTHMGKAGGSTVKGLMDASIKHTHHTIGLYQNHQWMRGK---ESVKKGLETTK-YTMTFGPYAEALRPHGG-------SNCKWFTMFRHPVSRLVSAYFYCKQKTRDELCATDVLSAQKTDLHTFAEHWGNYGLRQFALAFVGAEDVLSAELK------RGNKARSLEF-PGWYRLKEYFEGLHEAQQAETIAQMREDSNDLAMSHLLPPVEDLLRWNYSAVGILEQWETSMILFNTALEVPNFDWSAASPKIGRKNADEKFRAEEARVLRAAWDDPAIKNFLWLDLTLYDYAVSVHRKQAAEYGV 1059
            +CW+F H+ KAGG+TVK L+  S      T   Y ++QW +G+   ESV   L +   ++   G Y EALR           + C+WFT+FRHPVSRLVSAY+YC++   D+LCA++ +S++  DL TFA HWGN+ LRQFAL FV  + V    +        G  A  +E  PGWY LK +           +    R       + ++  PV DLLR NY+ VGILE W  ++ LF++AL++P   W     + G+ N D +F+ E+  VL+ A  DP I   L LDL LY  AV +  +Q   YG+
Sbjct:   87 RCWIFNHLQKAGGTTVKRLLFDSWGSESTT---YDSYQWKKGQGYAESVAASLASPAGWSAAAGGYLEALRRTPAFQPDDERTPCRWFTVFRHPVSRLVSAYYYCREDPSDQLCASEFVSSRNVDLVTFARHWGNFALRQFALGFVSHDKVKDFLVSPNGGGAMGLTAEQVELMPGWYMLKLFLNDRSGVADDTSPEGTR-------LEYMFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLNVDTRFKGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSYGI 386          
BLAST of mRNA_Ecto-sp13_S_contig18926.5989.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI)

HSP 1 Score: 206 bits (525), Expect = 4.600e-59
Identity = 122/328 (37.20%), Postives = 182/328 (55.49%), Query Frame = 1
Query:  121 GVAAASSNITSSRLLKSPGTR-KCWVFTHMGKAGGSTVKGLMDASIKHTHHTIGLYQNHQWMRGKE-SVKKGLETT---KYTMTFGPYAEALRPHG--GSNCKWFTMFRHPVSRLVSAYFYCKQKTRDELCATDVLSAQKTDLHTFAEHWGNYGLRQFALAFVGAEDVLSAELKRGNKARSLEFPGWYRLKEYFE-------GLHEAQQAETIAQMREDSNDLAMSHLLPPVEDLLRWNYSAVGILEQWETSMILFNTALEVPNFDWSAASPKIGRKNADEKFRAEEARVLRAAWDDPAIKNFLWLDLTLYDYAVSVHRKQAAEYGVI 1062
            G  A+ S  + +  ++SP +  +CWVF H+ K GGSTVK L++           +Y + +W  G E S K G +     K+ +  G Y EALR     G+ C++FT+FRHP++R+VSAYFYC+  + D  CA++V+ A+  DL TFA+HWGN+ LRQFAL FV ++DV                   Y+LK Y E       G+   ++A T  Q    + D  +  LL P  DL+R  Y AVGILEQW T++ LF+  L++P  +W     + G+ + D   +  E   L+ AW D  +K ++ LDL LY++AV V  +QA  +G++
Sbjct:  154 GDGASRSAASVAATVQSPASPGQCWVFMHLQKCGGSTVKDLLE---DRWGSRFFIYDSMRWKFGDEFSAKFGAKLALGDKWNVMTGGYTEALRLSEPVGAGCRFFTLFRHPIARMVSAYFYCRSVSGDVACASEVMQAKDVDLLTFAKHWGNFALRQFALGFVPSDDVQE-----------------YQLKMYLERPQKEDGGVLGQREAMTAHQDAAATPDAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQLEIETLQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSHGLL 461          
BLAST of mRNA_Ecto-sp13_S_contig18926.5989.1 vs. uniprot
Match: A0A6H5JQM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM0_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 1.520e-41
Identity = 97/295 (32.88%), Postives = 153/295 (51.86%), Query Frame = 1
Query:  187 CWVFTHMGKAGGSTVKGLMDASIKHTHHTIGLYQNHQWMRGKESVKKGLETTKYTMTFGPYAEALRPHGGSNCKWFTMFRHPVSRLVSAYFYCKQKTRDELCATDVLSAQKTDLHTFAEHWGNYGLRQFALAFVGAEDVLS-AELKRGNKARSLEFPGWYRLKEYFEGLHEAQQAETIAQMREDSNDLAMSHLLPPVEDLLRWNYSAVGILEQWETSMILFNTALEVPNFDWSAASPKIG---RKNADEKFRAEEARVLRAAWDDPAIKNFLWLDLTLYDYAVSVHRKQAAEYGV 1059
            CW+F HM K+G S   G    + +       ++   QW RG +     +  + + +  G   E+LR H   +CKW T+FRHP++RL+SAY +C +  +D +C       + T L  FAE WGN+ +RQFAL  V    V   A  ++     S+    WY +KEY   L     AE          D  +  +L PV+ LL   Y+AVGI ++ ET+M+LF+ AL +   DWS++   +G       D ++   E+   R A ++P I + L LD++LY++A+ V + Q A++G+
Sbjct:  273 CWIFMHMDKSGAS---GARRVATERWRKDELVFDTVQWRRG-DGFAADVMASHWKLLHGGCVESLRNHKERSCKWLTIFRHPIARLLSAYHHCLEAPKDPVCPP----TESTGLVVFAELWGNFAMRQFALESVSPSAVKEWAAQRQARTGTSM----WYLVKEY---LARGGIAE----------DEVLESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSMEGLDWSSSWATLGINEEVKQDSEYDIAESEPFRQALENPRIVSALRLDMSLYEHAMHVFKDQVAQFGI 542          
BLAST of mRNA_Ecto-sp13_S_contig18926.5989.1 vs. uniprot
Match: D8LU75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU75_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 1.190e-39
Identity = 90/259 (34.75%), Postives = 139/259 (53.67%), Query Frame = 1
Query:  295 QWMRGKESVKKGLETTKYTMTFGPYAEALRPHGGSNCKWFTMFRHPVSRLVSAYFYCKQKTRDELCATDVLSAQKTDLHTFAEHWGNYGLRQFALAFVGAEDVLS-AELKRGNKARSLEFPGWYRLKEYFEGLHEAQQAETIAQMREDSNDLAMSHLLPPVEDLLRWNYSAVGILEQWETSMILFNTALEVPNFDWSAASPKIG---RKNADEKFRAEEARVLRAAWDDPAIKNFLWLDLTLYDYAVSVHRKQAAEYGV 1059
            QW RG +     +  +++ +  G   E+LR H G +CKW T+FRHP++RL+SAY +C    +D +C       + T L  FAE WGN+ +RQFALA V    V   A  ++     S+    WY +KEY   L     AE          D  +   L PV+ LL   Y+AVGI ++ +T+M+LF+ AL +   DWS++   +G       D ++   E+   R A ++P I + L LD++LY++AV V + Q A++G+
Sbjct:   28 QWRRG-DGFAADVMASRWKLLHGGCVESLRNHKGRSCKWITIFRHPIARLLSAYDHCLGAPKDPVCPP----TESTGLAAFAELWGNFAMRQFALAAVSPSAVKEWAAQRQARTGTSM----WYLVKEY---LARGGIAE----------DEVLGSKLEPVKGLLSTQYAAVGIAQELKTTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDITESEPFRQALENPRIVSALRLDMSLYEHAVHVFKDQVAQFGI 264          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18926.5989.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A6H5L061_9PHAE1.340e-9263.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS84_ECTSI2.350e-8548.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JY77_9PHAE1.840e-7740.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQY7_9PHAE1.360e-7140.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNJ0_9PHAE8.150e-7137.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWQ3_ECTSI2.010e-6538.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G715_ECTSI1.610e-6139.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G716_ECTSI4.600e-5937.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JQM0_9PHAE1.520e-4132.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LU75_ECTSI1.190e-3934.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18926contigEcto-sp13_S_contig18926:849..2104 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score223.4
Seed ortholog evalue1.7e-55
Seed eggNOG ortholog2880.D7FWQ3
Model size1065
Hectar predicted targeting categorysignal peptide
Exons2
EggNOG free text desc.Sulfotransferase family
EggNOG OGs2CYGC@1,2S47N@2759
Ec32 ortholog descriptionSulfotransferase
Ec32 orthologEc-12_003580.1
Cds size1056
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462966.5177448-CDS-Ecto-sp13_S_contig18926:848..14851681462966.5177448-CDS-Ecto-sp13_S_contig18926:848..1485Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18926 849..1485 -
1681462966.527463-CDS-Ecto-sp13_S_contig18926:1676..20951681462966.527463-CDS-Ecto-sp13_S_contig18926:1676..2095Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18926 1677..2095 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462966.5363197-UTR-Ecto-sp13_S_contig18926:2095..21041681462966.5363197-UTR-Ecto-sp13_S_contig18926:2095..2104Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig18926 2096..2104 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18926.5989.1prot_Ecto-sp13_S_contig18926.5989.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig18926 849..2095 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig18926.5989.1

>prot_Ecto-sp13_S_contig18926.5989.1 ID=prot_Ecto-sp13_S_contig18926.5989.1|Name=mRNA_Ecto-sp13_S_contig18926.5989.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=352bp
MLRRQRVSTVLLWLGAFIAAGSAPWLSCTEKESPRVRGVAAASSNITSSR
LLKSPGTRKCWVFTHMGKAGGSTVKGLMDASIKHTHHTIGLYQNHQWMRG
KESVKKGLETTKYTMTFGPYAEALRPHGGSNCKWFTMFRHPVSRLVSAYF
YCKQKTRDELCATDVLSAQKTDLHTFAEHWGNYGLRQFALAFVGAEDVLS
AELKRGNKARSLEFPGWYRLKEYFEGLHEAQQAETIAQMREDSNDLAMSH
LLPPVEDLLRWNYSAVGILEQWETSMILFNTALEVPNFDWSAASPKIGRK
NADEKFRAEEARVLRAAWDDPAIKNFLWLDLTLYDYAVSVHRKQAAEYGV
I*
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mRNA from alignment at Ecto-sp13_S_contig18926:849..2104-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig18926.5989.1 ID=mRNA_Ecto-sp13_S_contig18926.5989.1|Name=mRNA_Ecto-sp13_S_contig18926.5989.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1256bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18926:849..2104- (Ectocarpus species13 EcNAP12_S_4_19m)
TTCTGGATCATGTTGCGCAGGCAACGTGTCAGCACCGTGCTACTGTGGCT AGGTGCGTTCATCGCGGCTGGTTCTGCTCCGTGGCTCAGCTGTACAGAAA AAGAATCGCCGCGCGTACGCGGCGTTGCAGCCGCCAGTTCGAATATAACG TCCAGCAGGCTATTGAAGTCTCCAGGCACAAGAAAGTGTTGGGTATTTAC TCACATGGGCAAGGCGGGTGGATCGACAGTCAAGGGCCTCATGGACGCTT CGATCAAGCACACCCACCATACAATTGGGTTGTACCAAAACCACCAATGG ATGAGGGGGAAAGAATCCGTGAAGAAGGGGCTTGAGACAACGAAGTACAC AATGACATTTGGTCCCTACGCGGAGGCCCTTCGCCCTCACGGAGGCAGCA ACTGCAAGTGGTTCACCATGTTTCGACAGTGAGTACCAACGTGGCACAGG TCGATGGTTTCGAGGCATACTATACATGTCTCTCGCTTCCTTGTCTCTGT TGATTTCTAAGGTTTGCGATCGCAATGGTGATATCATGTTCAGCACGGCG ATCGTGACACAGCTTGTGGCGCCTCGCCCCCAACCTCGCGTCTGCCTTGA CGTGCGTTTCTTGCTTCAGCCCAGTATCACGACTGGTCAGCGCCTACTTC TATTGCAAGCAAAAAACGCGTGATGAGCTTTGCGCGACTGACGTTCTCAG CGCGCAGAAGACCGACCTGCACACCTTCGCCGAACATTGGGGGAACTACG GTCTCCGCCAGTTCGCGCTGGCTTTTGTAGGGGCTGAGGACGTGCTATCC GCCGAGCTGAAAAGGGGAAACAAGGCGCGTTCGTTGGAGTTTCCCGGCTG GTATAGGTTAAAAGAGTACTTTGAAGGTCTGCATGAGGCACAACAAGCCG AAACCATTGCACAAATGCGTGAAGATTCAAACGACTTGGCGATGTCACAC CTCCTCCCACCCGTTGAGGATCTGTTGAGATGGAACTACTCCGCCGTGGG TATACTAGAGCAATGGGAAACAAGCATGATCCTATTCAACACAGCCCTCG AGGTGCCGAACTTCGACTGGTCTGCGGCTTCTCCCAAAATTGGGCGAAAG AACGCGGACGAGAAGTTCCGCGCGGAGGAGGCCCGGGTGCTACGCGCTGC GTGGGATGACCCGGCCATCAAGAACTTCTTGTGGCTAGATTTGACTTTGT ACGACTACGCCGTAAGCGTTCACAGGAAACAAGCCGCAGAGTATGGCGTG ATATAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18926:849..2104-

>mRNA_Ecto-sp13_S_contig18926.5989.1 ID=mRNA_Ecto-sp13_S_contig18926.5989.1|Name=mRNA_Ecto-sp13_S_contig18926.5989.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1056bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18926:849..2104- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTTGCGCAGGCAACGTGTCAGCACCGTGCTACTGTGGCTAGGTGCGTT
CATCGCGGCTGGTTCTGCTCCGTGGCTCAGCTGTACAGAAAAAGAATCGC
CGCGCGTACGCGGCGTTGCAGCCGCCAGTTCGAATATAACGTCCAGCAGG
CTATTGAAGTCTCCAGGCACAAGAAAGTGTTGGGTATTTACTCACATGGG
CAAGGCGGGTGGATCGACAGTCAAGGGCCTCATGGACGCTTCGATCAAGC
ACACCCACCATACAATTGGGTTGTACCAAAACCACCAATGGATGAGGGGG
AAAGAATCCGTGAAGAAGGGGCTTGAGACAACGAAGTACACAATGACATT
TGGTCCCTACGCGGAGGCCCTTCGCCCTCACGGAGGCAGCAACTGCAAGT
GGTTCACCATGTTTCGACACCCAGTATCACGACTGGTCAGCGCCTACTTC
TATTGCAAGCAAAAAACGCGTGATGAGCTTTGCGCGACTGACGTTCTCAG
CGCGCAGAAGACCGACCTGCACACCTTCGCCGAACATTGGGGGAACTACG
GTCTCCGCCAGTTCGCGCTGGCTTTTGTAGGGGCTGAGGACGTGCTATCC
GCCGAGCTGAAAAGGGGAAACAAGGCGCGTTCGTTGGAGTTTCCCGGCTG
GTATAGGTTAAAAGAGTACTTTGAAGGTCTGCATGAGGCACAACAAGCCG
AAACCATTGCACAAATGCGTGAAGATTCAAACGACTTGGCGATGTCACAC
CTCCTCCCACCCGTTGAGGATCTGTTGAGATGGAACTACTCCGCCGTGGG
TATACTAGAGCAATGGGAAACAAGCATGATCCTATTCAACACAGCCCTCG
AGGTGCCGAACTTCGACTGGTCTGCGGCTTCTCCCAAAATTGGGCGAAAG
AACGCGGACGAGAAGTTCCGCGCGGAGGAGGCCCGGGTGCTACGCGCTGC
GTGGGATGACCCGGCCATCAAGAACTTCTTGTGGCTAGATTTGACTTTGT
ACGACTACGCCGTAAGCGTTCACAGGAAACAAGCCGCAGAGTATGGCGTG
ATATAG
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