prot_Ecto-sp13_S_contig18915.5985.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18915.5985.1
Unique Nameprot_Ecto-sp13_S_contig18915.5985.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length294
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18915.5985.1 vs. uniprot
Match: D8LH68_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH68_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 5.710e-60
Identity = 290/294 (98.64%), Postives = 292/294 (99.32%), Query Frame = 0 
Query:    1 ADGDTALYVAAKAGHDEAVRALLEVQATKVNWQNHKGITSVSVAAHKGREEIVKMLISADADVNIDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAMLHPSKQMRLMQDAEVAERTLVLQKVFNRYTAGKLHVTETQPDVSGSASLSMLVRSLISPISSNRAVFEHIVSFL 294
            ADGDTALYVAAKAGHDEAVRALLEVQATKVNWQNHKGITSVSVAAHKGREEIVKMLISADADVNIDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAMLHPSKQMRLMQDAEVAERTLVLQKVFNRYTAGKL VTETQPDVSGSASLSML+RSLISPISSNRAVFEHI SF+
Sbjct:   46 ADGDTALYVAAKAGHDEAVRALLEVQATKVNWQNHKGITSVSVAAHKGREEIVKMLISADADVNIDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAMLHPSKQMRLMQDAEVAERTLVLQKVFNRYTAGKLLVTETQPDVSGSASLSMLIRSLISPISSNRAVFEHIASFI 339
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BLAST of mRNA_Ecto-sp13_S_contig18915.5985.1 vs. uniprot
Match: A0A835YM71_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM71_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.030e-16
Identity = 44/63 (69.84%), Postives = 54/63 (85.71%), Query Frame = 0 
Query:    1 ADGDTALYVAAKAGHDEAVRALLEVQATKVNWQNHKGITSVSVAAHKGREEIVKMLISADADV 63
            A+GDTAL++AAKAGH++AV ALL V  T+VNWQNHKGIT++S AAHKGR  IV+ LI+A ADV
Sbjct:  235 AEGDTALFIAAKAGHEDAVAALLAVPETQVNWQNHKGITALSAAAHKGRAGIVRALIAAGADV 297
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18915.5985.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LH68_ECTSI5.710e-6098.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YM71_9STRA1.030e-1669.84Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 3..18
score: 41.1
coord: 52..66
score: 36.92
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 36..65
e-value: 0.0081
score: 25.4
coord: 168..197
e-value: 9.6E-6
score: 35.1
coord: 135..164
e-value: 2.3
score: 17.2
coord: 2..32
e-value: 0.0038
score: 26.5
coord: 102..131
e-value: 0.12
score: 21.4
coord: 69..98
e-value: 0.0084
score: 25.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 2..24
score: 9.458
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 36..68
score: 11.087
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 69..101
score: 11.087
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 168..200
score: 13.678
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 102..134
score: 12.289
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 134..227
e-value: 1.5E-26
score: 95.2
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..133
e-value: 1.9E-38
score: 134.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..222
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 140..221
e-value: 7.7E-11
score: 42.4
coord: 62..132
e-value: 8.0E-13
score: 48.8
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 2..221
score: 59.979
NoneNo IPR availablePANTHERPTHR24121NO MECHANORECEPTOR POTENTIAL C, ISOFORM D-RELATEDcoord: 47..224
coord: 2..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18915contigEcto-sp13_S_contig18915:1042..3400 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18915.5985.1mRNA_Ecto-sp13_S_contig18915.5985.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18915 1042..3400 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18915.5985.1 ID=prot_Ecto-sp13_S_contig18915.5985.1|Name=mRNA_Ecto-sp13_S_contig18915.5985.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=294bp
ADGDTALYVAAKAGHDEAVRALLEVQATKVNWQNHKGITSVSVAAHKGRE
EIVKMLISADADVNIDSNNGSTPLIQASHFGHAEVVKLLVNANALVDKAN
QKGTTALMRATQEGNEEVVGILVAAGADVSKRNNERMNALMLGSQRGHAA
IVQALIHHKADIDGQTAQGSTALMLACKRGHEEVVRVLLTAGAELHQKDS
RGRTARDTASKRSHESILAMLHPSKQMRLMQDAEVAERTLVLQKVFNRYT
AGKLHVTETQPDVSGSASLSMLVRSLISPISSNRAVFEHIVSFL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom