prot_Ecto-sp13_S_contig18911.5983.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18911.5983.1
Unique Nameprot_Ecto-sp13_S_contig18911.5983.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length83
Homology
BLAST of mRNA_Ecto-sp13_S_contig18911.5983.1 vs. uniprot
Match: A0A6H5JSF1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF1_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 6.460e-18
Identity = 37/56 (66.07%), Postives = 41/56 (73.21%), Query Frame = 0
Query:   28 MAEADREALVAIYNATGGPDWRQSGRWNTDADLSEWHRIKTNDQGRVVGLVLQYNN 83
            MA+ DREAL A YNATGGP+W  +  WN DAD SEW  I+TNDQGRVV L L  NN
Sbjct:   53 MAQTDREALGAFYNATGGPNWEHNNNWNADADPSEWLGIETNDQGRVVRLSLGSNN 108          
BLAST of mRNA_Ecto-sp13_S_contig18911.5983.1 vs. uniprot
Match: A0A6H5JK91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK91_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 1.210e-17
Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = 0
Query:   28 MAEADREALVAIYNATGGPDWRQSGRWNTDADLSEWHRIKTNDQGRVVGLVLQYNN 83
            MA+ DR+ALVA+Y ATGG +WR+S  W+TDADL  WH +  NDQGRVV L L+ NN
Sbjct:    1 MAQTDRDALVALYRATGGENWRESQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNN 56          
BLAST of mRNA_Ecto-sp13_S_contig18911.5983.1 vs. uniprot
Match: A0A6H5K3C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3C2_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 6.110e-17
Identity = 33/56 (58.93%), Postives = 40/56 (71.43%), Query Frame = 0
Query:   28 MAEADREALVAIYNATGGPDWRQSGRWNTDADLSEWHRIKTNDQGRVVGLVLQYNN 83
            MA+ DR+ALVA+Y ATGG  W  S  W+TD+DL  WH +  NDQGRVV L L +NN
Sbjct:    1 MAQTDRDALVAMYRATGGEKWSTSQNWDTDSDLKTWHGVNVNDQGRVVKLELGFNN 56          
BLAST of mRNA_Ecto-sp13_S_contig18911.5983.1 vs. uniprot
Match: A0A6H5K3D6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3D6_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 3.060e-16
Identity = 30/52 (57.69%), Postives = 42/52 (80.77%), Query Frame = 0
Query:   32 DREALVAIYNATGGPDWRQSGRWNTDADLSEWHRIKTNDQGRVVGLVLQYNN 83
            DR ALVA++NATGG +W+++ +WNTDA L +W+ ++ ND GRVV L L+YNN
Sbjct:   12 DRAALVALFNATGGANWKKNTKWNTDAPLGQWYGVEVNDAGRVVKLSLRYNN 63          
BLAST of mRNA_Ecto-sp13_S_contig18911.5983.1 vs. uniprot
Match: A0A6H5JX36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX36_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 1.270e-15
Identity = 33/56 (58.93%), Postives = 38/56 (67.86%), Query Frame = 0
Query:   28 MAEADREALVAIYNATGGPDWRQSGRWNTDADLSEWHRIKTNDQGRVVGLVLQYNN 83
            MA  DR+ALVA+YNAT G  W  +  WNT A LS+WH +  NDQGRVV L L  NN
Sbjct:    1 MASTDRDALVALYNATEGGRWSTNRNWNTGAPLSQWHGVHVNDQGRVVALELAENN 56          
BLAST of mRNA_Ecto-sp13_S_contig18911.5983.1 vs. uniprot
Match: D8LL09_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL09_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 1.670e-15
Identity = 34/58 (58.62%), Postives = 43/58 (74.14%), Query Frame = 0
Query:   26 SIMAEADREALVAIYNATGGPDWRQSGRWNTDADLSEWHRIKTNDQGRVVGLVLQYNN 83
            S M + DR+ALVA+Y+A GG +W+ +G WN DADLS+WH I  NDQGRVV + L  NN
Sbjct:   49 STMPQTDRDALVALYDAAGGFNWKNNGNWNADADLSKWHGININDQGRVVEVHLAANN 106          
BLAST of mRNA_Ecto-sp13_S_contig18911.5983.1 vs. uniprot
Match: D8LBY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY3_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 5.080e-15
Identity = 33/56 (58.93%), Postives = 41/56 (73.21%), Query Frame = 0
Query:   28 MAEADREALVAIYNATGGPDWRQSGRWNTDADLSEWHRIKTNDQGRVVGLVLQYNN 83
            MA+ DR+ALV +Y ATGG +WR+   W+TDADL  WH +  NDQGRVV L L+ NN
Sbjct:    1 MAQTDRDALVVLYRATGGENWRERQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNN 56          
BLAST of mRNA_Ecto-sp13_S_contig18911.5983.1 vs. uniprot
Match: D8LFK2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK2_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 1.030e-14
Identity = 32/56 (57.14%), Postives = 42/56 (75.00%), Query Frame = 0
Query:   28 MAEADREALVAIYNATGGPDWRQSGRWNTDADLSEWHRIKTNDQGRVVGLVLQYNN 83
            MA+ DR+ALVA+YNATGG +W+ +  W T A LS+WH ++ N QGRVV L L +NN
Sbjct:   71 MAQTDRKALVALYNATGGAEWKNNQNWTTSAALSQWHGVEVNTQGRVVKLSLGWNN 126          
BLAST of mRNA_Ecto-sp13_S_contig18911.5983.1 vs. uniprot
Match: D7G496_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G496_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 1.280e-14
Identity = 33/56 (58.93%), Postives = 42/56 (75.00%), Query Frame = 0
Query:   28 MAEADREALVAIYNATGGPDWRQSGRWNTDADLSEWHRIKTNDQGRVVGLVLQYNN 83
            MA+ DR+ALVA+YNATGG  W+ +  WNT A LS+W+R++ N QGRVV L L  NN
Sbjct:  125 MAQTDRKALVALYNATGGVKWKNNQNWNTSAALSQWYRVEVNSQGRVVKLSLWNNN 180          
BLAST of mRNA_Ecto-sp13_S_contig18911.5983.1 vs. uniprot
Match: D8LKS5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 1.300e-14
Identity = 32/55 (58.18%), Postives = 41/55 (74.55%), Query Frame = 0
Query:   28 MAEADREALVAIYNATGGPDWRQSGRWNTDADLSEWHRIKTNDQGRVVGLVLQYN 82
            MA  DR+ LVA+YNAT GP+W+    W+T+ADLS+WH +K +DQGRVV L L  N
Sbjct:    1 MAPTDRDVLVALYNATDGPNWKNKTNWDTNADLSDWHGVKADDQGRVVKLSLSAN 55          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18911.5983.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JSF1_9PHAE6.460e-1866.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JK91_9PHAE1.210e-1762.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3C2_9PHAE6.110e-1758.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3D6_9PHAE3.060e-1657.69Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JX36_9PHAE1.270e-1558.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LL09_ECTSI1.670e-1558.62Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D8LBY3_ECTSI5.080e-1558.93Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D8LFK2_ECTSI1.030e-1457.14Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D7G496_ECTSI1.280e-1458.93Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D8LKS5_ECTSI1.300e-1458.18LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 27..83
e-value: 3.0E-13
score: 50.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18911contigEcto-sp13_S_contig18911:1463..2525 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18911.5983.1mRNA_Ecto-sp13_S_contig18911.5983.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18911 1463..2525 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18911.5983.1 ID=prot_Ecto-sp13_S_contig18911.5983.1|Name=mRNA_Ecto-sp13_S_contig18911.5983.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=83bp
QRERKYRTRRPTGSSFSLLQSAKALSIMAEADREALVAIYNATGGPDWRQ
SGRWNTDADLSEWHRIKTNDQGRVVGLVLQYNN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf