prot_Ecto-sp13_S_contig1891.5981.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1891.5981.1
Unique Nameprot_Ecto-sp13_S_contig1891.5981.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length744
Homology
BLAST of mRNA_Ecto-sp13_S_contig1891.5981.1 vs. uniprot
Match: A0A6H5L7Q0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Q0_9PHAE)

HSP 1 Score: 1126 bits (2913), Expect = 0.000e+0
Identity = 632/746 (84.72%), Postives = 646/746 (86.60%), Query Frame = 0
Query:    1 MSHWERLLLSSLSGGEPVNSWPPGFGDVARPLASPRNTQNKNRSLISSTSSSVASTASTGRKRRPSVLGGGFSTVGSCAASSPKSIQGSWIEDDTDPKARPCWQQRHADRVGHPATRRGSRSDGHEDXXXXXXXXXXXXXXXXXKKTESTEIAVVGWGDRSRRRNSSRRASREETAEWNDGRPRKLSSKGVVLATATSTANSQQRQHQQYDGTANETHQMEAGRRNTDKTFGGAATSIGTAIAYVG-GSDDGSGVSISAERATEIVTIPAVTPPPFXXXXXXXXXXXXX--TSIPSVAQPPPTRETPRIGTLKVFYQSPASQSAGEGASAKSATMPTRMGLAASAPNLPNLGSMNNESDQHSSGSGSRFPQVLPWQRWRQEGRGASVGNRAGLAVAAGGGLEGCGVLLDGGGQKVFHNFVFRRKKRRKDRKPLRDTLASLDDNATDYQAASSAGGTSGRRAAGWRCGGHSSSSCSGSSVEMRDSWLRRRQKWETHPSGDWDRPERPGQMNRTRPPLRTPRDAFSVVSFSSSGSTRSPCSSPPANGQRAGGDPCSSGVGRRPVKCQRCGSSRVKLLATTVASARRSPTHLLRQPPRRASIDSFCVRARHMRENAGGGGGSRNSGVPTYSDATSGSSRSSIDRLRLAPVSNRHKQQGNTHLVRSMLSPRRKNVAGLGDTGRIGTGGESLAELRGGERNAANLPRGFMDGAAVVGSRKASVRPPPGGGIIIPAPKPHLMTPVSRGGSGL 743
            MSHWERLLLSSLSGGEPVNSWPPGFGDVARPLASPR+TQNKNRSL+SS SSSVASTAS  RKRRPSVLGGGFST GSCAASSP SIQGSWIEDDTDPKA PCWQQR ADRVGHPATR+GSRSDGHEDXXXXXXXXXXXX     KKTESTEI VVGWGDRS RRNSSRRASREETAEWNDGRPR+LSSKGVVLAT            QQYDGTANETHQ+EAG RN  KT GGAATSIGTAIAYVG GSDDGSGVSIS ERATEIVTIP +TPPPF               TSI SVAQP PTRETP I TLKV  QSPAS+SAGEG SAKSA  PTRMGLAASAPNLP LGSMNNESDQ SSGS SRFPQVLP QRWRQEGRGASV +RAGLAVAAGGGLEGCGVL DG GQKVFHNFVFRR KRRKDRKPLRDTLASLDDNATDYQA +SAGG SGRRAAG RCGGHSSSSCSGSSVEM +S LRRRQ WE+HPSGDWDRPERPGQMNRTRPP R PRDAFSVVSFSSSGS RSPCSSPPANGQR GG PCSSGVGRRPVKCQRCGS RVKL ATTVASARRSPTHLLRQP   AS DSFC RARH RENAGGGGGSRN G+PTY DA SGS RSS DRLRL PVSNRHKQQ NTHLV SMLSP RKN+AGL DTGRIGTGGE L ELRGGERNAAN PRG +DGAAVVGSRKASVRPPPGGGIIIPAPKPHLMT VS GGSGL
Sbjct:    1 MSHWERLLLSSLSGGEPVNSWPPGFGDVARPLASPRHTQNKNRSLVSSASSSVASTASRVRKRRPSVLGGGFSTAGSCAASSPNSIQGSWIEDDTDPKAGPCWQQRDADRVGHPATRKGSRSDGHEDXXXXXXXXXXXXEDHD-KKTESTEITVVGWGDRSSRRNSSRRASREETAEWNDGRPRRLSSKGVVLATXXXXXXXXXXXXQQYDGTANETHQVEAGVRNKVKTLGGAATSIGTAIAYVGNGSDDGSGVSISVERATEIVTIPTITPPPFRGWQQAAPNAAAAAATSIHSVAQPSPTRETPGIVTLKVSSQSPASKSAGEGVSAKSAMTPTRMGLAASAPNLPTLGSMNNESDQRSSGSVSRFPQVLPRQRWRQEGRGASVRHRAGLAVAAGGGLEGCGVLQDGRGQKVFHNFVFRRNKRRKDRKPLRDTLASLDDNATDYQAVASAGGISGRRAAGRRCGGHSSSSCSGSSVEMTESSLRRRQNWESHPSGDWDRPERPGQMNRTRPPPRMPRDAFSVVSFSSSGSARSPCSSPPANGQRVGGGPCSSGVGRRPVKCQRCGSGRVKLFATTVASARRSPTHLLRQPHSGASSDSFCARARHTRENAGGGGGSRNGGIPTYCDAGSGS-RSSTDRLRLGPVSNRHKQQRNTHLVTSMLSPWRKNLAGLSDTGRIGTGGELLGELRGGERNAANRPRGLIDGAAVVGSRKASVRPPPGGGIIIPAPKPHLMTRVSSGGSGL 744          
BLAST of mRNA_Ecto-sp13_S_contig1891.5981.1 vs. uniprot
Match: D7FXN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN3_ECTSI)

HSP 1 Score: 914 bits (2361), Expect = 0.000e+0
Identity = 545/701 (77.75%), Postives = 557/701 (79.46%), Query Frame = 0
Query:   44 SLISSTSSSVASTASTGRKRRPSVLGGGFSTVGSCAASSPKSIQGSWIEDDTDPKARPCWQQRHADRVGHPATRRGSRSDGHEDXXXXXXXXXXXXXXXXXKKTESTEIAVVGWGDRSRRRNSSRRASREETAEWNDGRPRKLSSKGVVLATATSTANSQQRQHQQYDGTANETHQMEAGRRNTDKTFGGAATSIGTAIAYVG-GSDDGSGVSISAERATEIVTIPAVTPPPFXXXXXXXXXXXXXTSIPSVAQPPPTRETPRIGTLKVFYQSPASQSAGEGASAKSATMPTRMGLAASAPNLPNLGSMNNESDQHSSGSGSRFPQVLPWQRWRQEGRGASVGNRAGLAVAAGGGLEGCGVLLDGGGQKVFHNFVFRRKKRRKDRKPLRDTLASLDDNATDYQAASSAGGTSGRRAAGWRCGGHSSSSCSGSSVEMRDSWLRRRQKWETHPSGDWDRPERPGQMNRTRPPLRTPRDAFSVVSFSSSGSTRSPCSSPPANGQRAGGDPCSSGVGRRPVKCQRCGSSRVKLLATTVASARRSPTHLLRQPPRRASIDSFCVRARHMRENAGGGGGSRNSGVPTYSDATSGSSRSSIDRLRLAPVSNRHKQQGNTHLVRSMLSPRRKNVAGLGDTGRIGTGGESLAELRGGERNAANLPRGFMDGAAVVGSRKASVRPPPGGGIIIPAPKPHLMTPVSRGGSGL 743
            S + S +SSVASTAS  RKRRPSVLGGGFST GSCA+SSPKSIQGSWIEDDTDPKA PCWQQR A RVGHPA RRGSRSDGH+DXXXXXXXXXXXXXXXXX  TESTEI VVGWGDRS RRNSSRRASREETAEWNDGRPR+LSSKGVVLAT              YDGTANETHQ+EAG RN DKT GGAATSIGTAIAYVG GSDDGSGVSIS ERATEI TIP +TPPPF             TSIPSVAQP P  ETP IGT     QSPASQSAGEGASAKS   PTRMGLAASAPNLP LGSMNNESDQHSS SGSRFPQVLP QRW QEGRGASV +RAGLAVAAGGGL GCGVL DGGGQKVFHNFVFRR KRRKDRKPLR TLASLDDNATDYQAA SAGGT GRRAAGWR                                     PERPGQMNRT PP RTP DAFSVVSFSSSGS  SP SSPPANGQRAGG  CSSGVGRRPVKCQRCGS RVKL ATTV SARRSPTHLLRQPPR AS DS+C RA H RENAGGGG SRN G P+YS A SGSS S  DRLRLAPVSNRH Q+GN   V SMLSPRRKN+AGL DTGRI TGG SLAELRGGERNAAN PRG MDGAAVVGSRKASVRPPPGGGIIIPAPKPHL TPVS GGSGL
Sbjct:    6 SRVVSLNSSVASTASRVRKRRPSVLGGGFSTAGSCASSSPKSIQGSWIEDDTDPKAGPCWQQRDAGRVGHPAIRRGSRSDGHDDXXXXXXXXXXXXXXXXX--TESTEITVVGWGDRSSRRNSSRRASREETAEWNDGRPRRLSSKGVVLATXXXXXXXXXXXXXXYDGTANETHQVEAGVRNKDKTLGGAATSIGTAIAYVGSGSDDGSGVSISVERATEIATIPTITPPPFQGGQQAAAAAA--TSIPSVAQPSPAGETPEIGT-----QSPASQSAGEGASAKSGMTPTRMGLAASAPNLPTLGSMNNESDQHSSRSGSRFPQVLPRQRWCQEGRGASVRHRAGLAVAAGGGLGGCGVLPDGGGQKVFHNFVFRRNKRRKDRKPLRATLASLDDNATDYQAAYSAGGTRGRRAAGWR-------------------------------------PERPGQMNRTCPPPRTPSDAFSVVSFSSSGSALSPRSSPPANGQRAGGGTCSSGVGRRPVKCQRCGSGRVKLFATTVVSARRSPTHLLRQPPRGASSDSYCARAGHTRENAGGGG-SRNGGTPSYSVAGSGSSTSCTDRLRLAPVSNRHTQRGNARKVTSMLSPRRKNLAGLSDTGRISTGGVSLAELRGGERNAANRPRGLMDGAAVVGSRKASVRPPPGGGIIIPAPKPHLRTPVSSGGSGL 659          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1891.5981.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L7Q0_9PHAE0.000e+084.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXN3_ECTSI0.000e+077.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..743
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1891contigEcto-sp13_S_contig1891:6351..10164 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1891.5981.1mRNA_Ecto-sp13_S_contig1891.5981.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1891 6351..10164 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1891.5981.1 ID=prot_Ecto-sp13_S_contig1891.5981.1|Name=mRNA_Ecto-sp13_S_contig1891.5981.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=744bp
MSHWERLLLSSLSGGEPVNSWPPGFGDVARPLASPRNTQNKNRSLISSTS
SSVASTASTGRKRRPSVLGGGFSTVGSCAASSPKSIQGSWIEDDTDPKAR
PCWQQRHADRVGHPATRRGSRSDGHEDDDDDDDDRDEEEEEDHDKKTEST
EIAVVGWGDRSRRRNSSRRASREETAEWNDGRPRKLSSKGVVLATATSTA
NSQQRQHQQYDGTANETHQMEAGRRNTDKTFGGAATSIGTAIAYVGGSDD
GSGVSISAERATEIVTIPAVTPPPFHGGQQAAATAAAATSIPSVAQPPPT
RETPRIGTLKVFYQSPASQSAGEGASAKSATMPTRMGLAASAPNLPNLGS
MNNESDQHSSGSGSRFPQVLPWQRWRQEGRGASVGNRAGLAVAAGGGLEG
CGVLLDGGGQKVFHNFVFRRKKRRKDRKPLRDTLASLDDNATDYQAASSA
GGTSGRRAAGWRCGGHSSSSCSGSSVEMRDSWLRRRQKWETHPSGDWDRP
ERPGQMNRTRPPLRTPRDAFSVVSFSSSGSTRSPCSSPPANGQRAGGDPC
SSGVGRRPVKCQRCGSSRVKLLATTVASARRSPTHLLRQPPRRASIDSFC
VRARHMRENAGGGGGSRNSGVPTYSDATSGSSRSSIDRLRLAPVSNRHKQ
QGNTHLVRSMLSPRRKNVAGLGDTGRIGTGGESLAELRGGERNAANLPRG
FMDGAAVVGSRKASVRPPPGGGIIIPAPKPHLMTPVSRGGSGL*
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