mRNA_Ecto-sp13_S_contig18884.5961.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig18884.5961.1
Unique NamemRNA_Ecto-sp13_S_contig18884.5961.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18884.5961.1 vs. uniprot
Match: A0A6H5L123_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L123_9PHAE)

HSP 1 Score: 391 bits (1004), Expect = 1.020e-129
Identity = 243/319 (76.18%), Postives = 247/319 (77.43%), Query Frame = 1 
Query:   19 QPYQLQHSDYLGGKGLGLARLHTPAGAVDLYVSHLHGDYSRAKGSKDPDRYKSHRVAQAFEVAHIIRLTSRSPLVLLL------------------------------------SDLNAGPGSMPYGLQRSVAGLLDAFGEARPDEEGFTCEATDNVFSNGRDPPARLDYVLFKALPPPLCAPQAVEPTWELSNCWVHQAHIPEDDTDASLLAQVADTRTESRNNNDTSRGAPQQRGRAGGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASPVRSEDGNFVDGVGAXXXXXXXXXXXXXXAKRRINVSDHHGV 867
            +PYQLQHSDYLGGKGLGLARLHTPAGAVDLYVSHLHGDYSRAKGSKDPDRYKSHRVAQAFEVAHIIRLTSRSPLVLLL                                    SDLNAGPGSMPYGLQRSVAGLLDAF EA+PDEEGFTCEATDNVFSNGRDPPARLDYVLFK LPPPLCAPQAVEPTWELSNCWVHQAHIP+DDTDASLLAQVADTRTESRN                  XXXXXXXXXXXXXXXXXXXX            AASPVRSEDGNFVDGVGA  XXXXXXXXXX  AKRRIN+SDHHGV
Sbjct:  132 RPYQLQHSDYLGGKGLGLARLHTPAGAVDLYVSHLHGDYSRAKGSKDPDRYKSHRVAQAFEVAHIIRLTSRSPLVLLLVRTPTPKPHTAVRYDKRGSHEHRQRAKKQVVDFSSLSDLNAGPGSMPYGLQRSVAGLLDAFSEAKPDEEGFTCEATDNVFSNGRDPPARLDYVLFKVLPPPLCAPQAVEPTWELSNCWVHQAHIPQDDTDASLLAQVADTRTESRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDSQPRGGVRAAAASPVRSEDGNFVDGVGAGLXXXXXXXXXXDGAKRRINLSDHHGV 450
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BLAST of mRNA_Ecto-sp13_S_contig18884.5961.1 vs. uniprot
Match: D8LH10_ECTSI (Similar to neutral Sphingomyelinase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH10_ECTSI)

HSP 1 Score: 232 bits (591), Expect = 3.800e-69
Identity = 110/115 (95.65%), Postives = 114/115 (99.13%), Query Frame = 1 
Query:  166 RYKSHRVAQAFEVAHIIRLTSRSPLVLLLSDLNAGPGSMPYGLQRSVAGLLDAFGEARPDEEGFTCEATDNVFSNGRDPPARLDYVLFKALPPPLCAPQAVEPTWELSNCWVHQA 510
            RYKSHRVAQAFEVAHIIRLTSRSPLVLLLSDLNAGPGSMPYGLQRSVAGLLDAFGEA+PD++GFTCEATDNVFSNGRDPPARLDYVLFKALPPPLCAPQAVEPTWELS CWVH+A
Sbjct:  224 RYKSHRVAQAFEVAHIIRLTSRSPLVLLLSDLNAGPGSMPYGLQRSVAGLLDAFGEAKPDQDGFTCEATDNVFSNGRDPPARLDYVLFKALPPPLCAPQAVEPTWELSKCWVHRA 338
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BLAST of mRNA_Ecto-sp13_S_contig18884.5961.1 vs. uniprot
Match: A0A0G4IKQ8_PLABS (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IKQ8_PLABS)

HSP 1 Score: 130 bits (327), Expect = 5.690e-31
Identity = 75/176 (42.61%), Postives = 96/176 (54.55%), Query Frame = 1 
Query:    1 RFSANGQPYQLQHSDYLGGKGLGLARLHTPAGAVDLYVSHLHGDYSRAKGSKDPDRYKSHRVAQAFEVAHIIRLTSRSPLVLLLSDLNAGPGSMPYGLQRSVAGLLDAFGEARPDEE----------GFTCEATDNVFSNGRD-PPARLDYVLFKALPPPLCAPQAVEPTWELSNC 495
            RF  NG+PY+L HSDYL G+G+GL RL +P G +D++V+HLH  Y     + D D Y SHR+ QAFE A  IR T+R+PLV+++ D N  P S+   + RS   L DA+    P  E          G T    DN FS      P RLDYV+F  L  PL  P+     W L  C
Sbjct:  147 RFLINGKPYKLHHSDYLAGRGVGLLRLSSPTGPIDVFVTHLHAMYV---DNPDDDEYLSHRMGQAFETAQFIRATARAPLVVVMGDFNCWPNSVSMCMLRSFVSLRDAWDYCHPTSESRDAAVEDWSGCTFGTPDNAFSYKEGIKPQRLDYVMFATLDQPLSDPRI---HWSLREC 316
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BLAST of mRNA_Ecto-sp13_S_contig18884.5961.1 vs. uniprot
Match: K3X5W6_GLOUD (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5W6_GLOUD)

HSP 1 Score: 114 bits (284), Expect = 5.550e-25
Identity = 64/162 (39.51%), Postives = 96/162 (59.26%), Query Frame = 1 
Query:    4 FSANGQPYQLQHSDYLGGKGLGLARLHTPAGAVDLYVSHLHGDYSRAKGSKDP-DRYKSHRVAQAFEVAHIIRLTSRSPLVLLLSDLNAGPGSMPYGLQRSVAGLLDAFGEARPDEEGFTCEATDNVFSNGRDPPARLDYVLFKALPPPLCAPQAVEPTWEL 486
            F+ +G+PY L  +D++  KG GL R+HTPAG +DLYV+HL  +Y+ A G+  P D Y  HR  Q++E+A  I  TSR+ L+++  D N+   S+   + + +  L DAF +    E+G T    DN +S G D P R+DYVL+K     +   Q  +P W+L
Sbjct:  147 FALSGRPYALHEADFVANKGAGLLRVHTPAGQIDLYVTHLIANYN-ALGAPGPGDCYLPHRTGQSYELARFIAATSRNDLMIVCGDFNSPSDSIELRIPKEIVQLRDAFTDTNS-EDGLTFATEDNKYSFG-DHPMRMDYVLYK-----IQKQQKGQPAWQL 300
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BLAST of mRNA_Ecto-sp13_S_contig18884.5961.1 vs. uniprot
Match: A0A225WFP6_9STRA (Sphingomyelin phosphodiesterase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WFP6_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.140e-24
Identity = 56/144 (38.89%), Postives = 91/144 (63.19%), Query Frame = 1 
Query:    4 FSANGQPYQLQHSDYLGGKGLGLARLHTPAGAVDLYVSHLHGDYSRAKGSKDP-DRYKSHRVAQAFEVAHIIRLTSRSPLVLLLSDLNAGPGSMPYGLQRSVAGLLDAFGEARPDEEGFTCEATDNVFSNGRDPPARLDYVLFK 432
            FS +G+PY L  SD++  KG+GL R+ TPAG +D+YV+HL  +Y+ A+G   P D Y+SHR  Q++E+   I+ T+R+ L ++  D N+ P  +   + + +  L D + +   DE+G T  + DN +S+G  P  R+DYV++K
Sbjct:  144 FSLSGRPYALHESDFVANKGVGLLRVETPAGQIDVYVTHLLANYN-ARGKPGPGDFYQSHRTGQSYELTRFIQATNRNKLTIVCGDFNSSPDCLELKVPKQLLSLRDTYTDTN-DEDGLTFASPDNKYSHGEHP-MRMDYVMYK 284
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BLAST of mRNA_Ecto-sp13_S_contig18884.5961.1 vs. uniprot
Match: A0A267H1I2_9PLAT (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267H1I2_9PLAT)

HSP 1 Score: 111 bits (277), Expect = 1.870e-24
Identity = 67/151 (44.37%), Postives = 91/151 (60.26%), Query Frame = 1 
Query:    1 RFSANGQPYQLQHSDYLGGKGLGLARLHTPAG-AVDLYVSHLHGDYSRAKGSKDPDRYKSHRVAQAFEVAHIIRLTSR-SPLVLLLSDLNAGPGSMPYGLQRSVAGLLDAFGE-----ARPDEEGFTCEATDNVFSNGRDP-PARLDYVLF 429
            R++ANG P++LQH D+ GGKG+G+AR+  P    +  YV+HLH  YSR K     D Y  HRV+QA E++  +RLTS  +   LL  DLN  P ++   L  + +GL DA+ E     A  D+EG TC+   N F++   P P RLDYVLF
Sbjct:   93 RYAANGFPHRLQHGDWFGGKGVGMARIRLPGDLTLACYVTHLHAQYSREK-----DEYLPHRVSQAHELSTFLRLTSAGADAALLCGDLNLSPDTLGLRLLLANSGLKDAWVEHAGAAACEDKEGVTCDRPGNSFTSKLKPFPERLDYVLF 238
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BLAST of mRNA_Ecto-sp13_S_contig18884.5961.1 vs. uniprot
Match: A0A3R7FZ56_9STRA (Endo/exonuclease/phosphatase domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7FZ56_9STRA)

HSP 1 Score: 112 bits (279), Expect = 2.940e-24
Identity = 59/144 (40.97%), Postives = 89/144 (61.81%), Query Frame = 1 
Query:    4 FSANGQPYQLQHSDYLGGKGLGLARLHTPAGAVDLYVSHLHGDYSRAKGSKDP-DRYKSHRVAQAFEVAHIIRLTSRSPLVLLLSDLNAGPGSMPYGLQRSVAGLLDAFGEARPDEEGFTCEATDNVFSNGRDPPARLDYVLFK 432
            FS +G+PY L  +D++  KG+GL R+ TPAG +D+YV+HL  +Y+ A G   P D Y+ HR  Q+FE+   I+ T+R+ L ++  D N+ P  +   + R +  L DAF +   D +G T    DN +S+G D P R+DYVL+K
Sbjct:  143 FSLSGRPYALHEADFVANKGVGLLRVETPAGQIDVYVTHLLANYN-AGGKPGPGDFYQWHRTGQSFELTQFIKATNRNKLTVVCGDFNSSPDCLELRVPRQLLQLRDAFTDTN-DSDGLTFATPDNKYSHG-DHPMRMDYVLYK 283
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BLAST of mRNA_Ecto-sp13_S_contig18884.5961.1 vs. uniprot
Match: A0A5D6XTJ0_9STRA (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTJ0_9STRA)

HSP 1 Score: 111 bits (278), Expect = 4.500e-24
Identity = 67/163 (41.10%), Postives = 94/163 (57.67%), Query Frame = 1 
Query:    4 FSANGQPYQLQHSDYLGGKGLGLARLHTPAGAVDLYVSHLHGDYSRAKGSKDP-DRYKSHRVAQAFEVAHIIRLTSRSPLVLLLSDLNAGPGSMPYGLQRSVAGLLDAFGEARPDEEGFTCEATDNVFSNGRDPPARLDYVLFKALPPPLCAPQ-AVEPTWEL 486
            F+ +G+PY L  +D++  KG+GL R+ TPAG VDLYV+HL  +Y+ A G+  P D Y  HRV QA+E+A  I  TSR+   ++  D N+   S+   +   +  L DAF +A    +G T    DN +S G D P R+DYVL+K         Q A EP W+L
Sbjct:  148 FALSGRPYALHEADFVANKGVGLLRVQTPAGPVDLYVTHLLANYN-ALGAPGPGDAYLPHRVGQAYELARFIEATSRNRFTIVCGDFNSPSDSLELRVPTEILQLRDAFTDANA-HDGLTFATADNKYSFG-DHPMRMDYVLYKTTTTANRPRQPAGEPAWQL 307
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BLAST of mRNA_Ecto-sp13_S_contig18884.5961.1 vs. uniprot
Match: A0A484E377_BRELC (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E377_BRELC)

HSP 1 Score: 110 bits (276), Expect = 6.000e-24
Identity = 56/144 (38.89%), Postives = 90/144 (62.50%), Query Frame = 1 
Query:    4 FSANGQPYQLQHSDYLGGKGLGLARLHTPAGAVDLYVSHLHGDYSRAKGSKDP-DRYKSHRVAQAFEVAHIIRLTSRSPLVLLLSDLNAGPGSMPYGLQRSVAGLLDAFGEARPDEEGFTCEATDNVFSNGRDPPARLDYVLFK 432
            FS +G+PY L  SD++  KG+GL R+ TPAG +D+YV+HL  +Y+ A G   P D Y  HR  Q++E+A  I  T+R+ L ++  D N+ P  +   + + + GL DA+ +   DE+G T  + +N +S G + P R+DY+++K
Sbjct:  145 FSLSGRPYALHESDFVANKGVGLLRIETPAGLIDVYVTHLVANYN-ALGKPGPGDFYMGHRTGQSYELAQFIAATNRNNLTIVCGDFNSSPNCLELRVPKQLLGLRDAYTDTN-DEDGLTFASPENKYSYG-EYPMRMDYIMYK 285
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18884.5961.1 vs. uniprot
Match: W2Q0A8_PHYPN (Endo/exonuclease/phosphatase domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2Q0A8_PHYPN)

HSP 1 Score: 110 bits (276), Expect = 7.110e-24
Identity = 53/143 (37.06%), Postives = 86/143 (60.14%), Query Frame = 1 
Query:    4 FSANGQPYQLQHSDYLGGKGLGLARLHTPAGAVDLYVSHLHGDYSRAKGSKDPDRYKSHRVAQAFEVAHIIRLTSRSPLVLLLSDLNAGPGSMPYGLQRSVAGLLDAFGEARPDEEGFTCEATDNVFSNGRDPPARLDYVLFK 432
            FS +G+PY L  SD++  KG+GL R+ TPAG +D+YV+HL  +Y+        D Y+ HR  Q++E+   I  T+R+ L ++  D N+ P  +   + + +  L DA+ +   DE+G T  + DN +S+G  P  R+DYV++K
Sbjct:  144 FSLSGRPYALHESDFVANKGVGLLRVETPAGQIDVYVTHLLANYNVGGKPGPGDFYRGHRTGQSYELTQFISATNRNSLTIVCGDFNSSPDCLELKIPKQLLSLRDAYTDTN-DEDGLTFASPDNKYSHGEHP-MRMDYVMYK 284
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18884.5961.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L123_9PHAE1.020e-12976.18Endo/exonuclease/phosphatase domain-containing pro... [more]
D8LH10_ECTSI3.800e-6995.65Similar to neutral Sphingomyelinase, putative n=1 ... [more]
A0A0G4IKQ8_PLABS5.690e-3142.61Endo/exonuclease/phosphatase domain-containing pro... [more]
K3X5W6_GLOUD5.550e-2539.51Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A225WFP6_9STRA1.140e-2438.89Sphingomyelin phosphodiesterase n=1 Tax=Phytophtho... [more]
A0A267H1I2_9PLAT1.870e-2444.37Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A3R7FZ56_9STRA2.940e-2440.97Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A5D6XTJ0_9STRA4.500e-2441.10Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A484E377_BRELC6.000e-2438.89Endo/exonuclease/phosphatase domain-containing pro... [more]
W2Q0A8_PHYPN7.110e-2437.06Endo/exonuclease/phosphatase domain-containing pro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18884contigEcto-sp13_S_contig18884:435..3043 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score232.3
Seed ortholog evalue3e-58
Seed eggNOG ortholog2880.D8LH10
Preferred nameSMPD2
Model size882
KEGG rclassRC00017,RC00425
KEGG koko:K01117,ko:K12351,ko:K12818
KEGG ReactionR02541
KEGG Pathwayko00600,ko01100,ko03040,ko04071,map00600,map01100,map03040,map04071
Hectar predicted targeting categoryother localisation
GOsGO:0000322,GO:0000323,GO:0000324,GO:0003674,GO:0003824,GO:0004620,GO:0004629,GO:0004767,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005773,GO:0005783,GO:0005886,GO:0005887,GO:0005901,GO:0006629,GO:0006643,GO:0006644,GO:0006665,GO:0006672,GO:0006684,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006970,GO:0007154,GO:0007165,GO:0008081,GO:0008150,GO:0008152,GO:0008610,GO:0009056,GO:0009058,GO:0009605,GO:0009612,GO:0009628,GO:0009651,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010556,GO:0010941,GO:0010942,GO:0012505,GO:0016020,GO:0016021,GO:0016042,GO:0016298,GO:0016787,GO:0016788,GO:0019216,GO:0019222,GO:0019637,GO:0019867,GO:0023052,GO:0030148,GO:0030149,GO:0031090,GO:0031224,GO:0031226,GO:0031300,GO:0031301,GO:0031306,GO:0031307,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0032592,GO:0032995,GO:0034248,GO:0034250,GO:0034641,GO:0035556,GO:0042578,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0043604,GO:0044087,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044271,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044459,GO:0044464,GO:0044853,GO:0045121,GO:0045834,GO:0046466,GO:0046467,GO:0046513,GO:0046519,GO:0046521,GO:0046889,GO:0046890,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051716,GO:0052712,GO:0052713,GO:0052714,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0090153,GO:0090154,GO:0097164,GO:0098573,GO:0098588,GO:0098589,GO:0098590,GO:0098805,GO:0098857,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1903338,GO:1905038,GO:2000303,GO:2000304
Exons5
EggNOG free text desc.inositol phosphosphingolipid phospholipase activity
EggNOG OGsKOG3873@1,KOG3873@2759
EC3.1.4.12,3.6.4.13
Cds size882
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03041
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462964.4640846-CDS-Ecto-sp13_S_contig18884:434..8061681462964.4640846-CDS-Ecto-sp13_S_contig18884:434..806Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18884 435..806 -
1681462964.4760904-CDS-Ecto-sp13_S_contig18884:1345..14601681462964.4760904-CDS-Ecto-sp13_S_contig18884:1345..1460Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18884 1346..1460 -
1681462964.4853814-CDS-Ecto-sp13_S_contig18884:2017..21601681462964.4853814-CDS-Ecto-sp13_S_contig18884:2017..2160Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18884 2018..2160 -
1681462964.502055-CDS-Ecto-sp13_S_contig18884:2373..24581681462964.502055-CDS-Ecto-sp13_S_contig18884:2373..2458Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18884 2374..2458 -
1681462964.5104814-CDS-Ecto-sp13_S_contig18884:2876..30431681462964.5104814-CDS-Ecto-sp13_S_contig18884:2876..3043Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18884 2877..3043 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18884.5961.1prot_Ecto-sp13_S_contig18884.5961.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig18884 435..3043 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig18884.5961.1

>prot_Ecto-sp13_S_contig18884.5961.1 ID=prot_Ecto-sp13_S_contig18884.5961.1|Name=mRNA_Ecto-sp13_S_contig18884.5961.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=294bp
RFSANGQPYQLQHSDYLGGKGLGLARLHTPAGAVDLYVSHLHGDYSRAKG
SKDPDRYKSHRVAQAFEVAHIIRLTSRSPLVLLLSDLNAGPGSMPYGLQR
SVAGLLDAFGEARPDEEGFTCEATDNVFSNGRDPPARLDYVLFKALPPPL
CAPQAVEPTWELSNCWVHQAHIPEDDTDASLLAQVADTRTESRNNNDTSR
GAPQQRGRAGGPAAAGALSSPLMGSRSSSSSGRDSQPRGGGRAAAASPVR
SEDGNFVDGVGAGLGGGGGRGGDGDGAKRRINVSDHHGVSRGY*
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mRNA from alignment at Ecto-sp13_S_contig18884:435..3043-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig18884.5961.1 ID=mRNA_Ecto-sp13_S_contig18884.5961.1|Name=mRNA_Ecto-sp13_S_contig18884.5961.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2609bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18884:435..3043- (Ectocarpus species13 EcNAP12_S_4_19m)
CGATTCTCAGCCAATGGGCAGCCGTACCAGCTGCAGCACAGCGACTACCT
TGGCGGCAAGGGGCTCGGCCTAGCCCGCCTACACACGCCGGCCGGTGCGG
TGGACCTTTACGTCTCGCACTTGCACGGAGACTACAGCCGGGCGAAGGGT
TCAAAAGACCCTGATAGGTGAGAGGAATCGGCCAGCGTGAAAATTACCCG
AAGCACCTGCTGTTGACCTTGGGATCTGAACACGAAGAAATTGTGCCCCT
TTCCAAGGCGCCCCACTCGCCCTGCCCACCCTTTTGGTCAGATATATGTT
TCTTCTTTGAAATCTCTTTCGAGGCGTCGGTTGCAATGGGGGGGGGTTAC
GCGAGCGGGGGCGACGCTTGTCGTCCTCGACGTACGGGTTGCTCTACTCG
CATCGACTTGATGTCATTTCGCTTTTCTTTTTGTGTCTTGTTGTGCGGTT
CGGCTGTTAGTGGGTTCGGTCTCCAACACACACGCTTGTCCCTTGTCTGT
GTTGCTTGTTTCGGTTGACGTGAAACGTTTTCCCGTTCTCGGGGTTCCTT
GTGTTATGATGACGATGATGTTTTTCCGAGGGCAGGTACAAGTCGCACAG
GGTGGCGCAAGCGTTCGAGGTGGCGCACATCATCCGACTCACTTCCAGGA
GCCCTCTGGTTTTACTCTTGGTGAGGACCTCCCACACCCACGCCGCGCAC
GGCCGTGCGGTACGATATCACTGCAAAGACAGGATCGCACGAGCAGAAAC
AAACAAAGATCCAAGAAGCAAGTGGTAGATTCAGTAGTCTGTTACGCCAC
GACCCGTTGGTTGCCCCCTGTGCTCGCCCTTTTCTCACCCGTTGTACCGT
TGTTTGCGGGACCCTATTTTACCGTTGAGATAGTCGGACCTGAACGCGGG
CCCCGGGTCGATGCCGTACGGGCTCCAGCGCAGCGTGGCGGGTCTGCTGG
ACGCGTTTGGTGAGGCTAGGCCCGACGAGGAGGGCTTCACGTGCGAGGCC
ACCGACAATGTGTTTTCCAACGGAAGGTGTGGGTGCCTGCCTCCTGCACC
GCCTTCTTTGTGGCCGCGGGGGGGGCGCAGAATGCCTCAGGGGGCTGGGC
GAGGTGTGCGTGCCCACGGCGCGGCCTTCTTCGTGGCCGCAGGGGGGGAC
GTAGAATGCCTTAGGGGGAGTCGTTGGTTGTTGAGTGTTGAGCGCTCAAG
GAGGCCTTGTCCATCTGTTGACGTTGGGGCGCCCCAAGAAGATCCTCATA
AGCTATGGTTTGCGGACATGGAGTTCCGTGTTGTTTCTGCCGCGCTCTCA
AGGCAGGAAAGGGTTGTGTCTGAACCTAGGTTGGGGGGAGAGAGTTGCTG
CTGTGACGCTCGTGCACGTGCTGGGTACAGCAGTAGTTTTGAGTTCGAGT
CTTGGCTCAGATTTCTCGCAGTTATTCCAGCATATCTAACTTTTGTATTT
AAGTGTAAGTAGGCACGCGGTATGTATGAGAATCGACATCTCCTCGCGTG
CTTGCCGCTGATGCCTTCCCTCGTCGACACTGACCCTCAGCTCTGCACAC
ACACACCCCTCTACGACACGTTACCAACCGCAGGGACCCGCCGGCGAGAC
TGGACTACGTGCTCTTTAAGGCCTTGCCGCCACCCCTGTGCGCGCCTCAG
GCAGTGGAACCCACGTGGGAGCTAAGCAACTGCTGGGTGCACCAAGCGGT
AAGATAGCTTTTCCGTGGCCGTCCTTAGGGGGTAGGTGACTTCGACGTTG
TCGGGGTATTCTGCTTTTGGGGAGGGGGGAGAGGGGGGGGTCCTGACTTG
CGTGCAGACTTTTACGAAACGGGCAGTTTTAGAGGCGCTACATGCGATGG
TTGTTCGCTTACGAAGTGGCACCGCCGTAAGCTTGGCTGTGATTGGAGTG
ATTGGAACGTGTTGCGCGTTGCCGCCCGGATTTGTTTGGAGGCGTCAAAC
CCTGGGTCTCTCTCTCTCTCCTCTCTCTGGCCGACCCGGACTATCATATC
GGACTTGATGAGGAATAACGTACGGAATCCCGTGAACAACAGGACAAGTA
TCAACAACACCACCCGTGATACCACCACCACCTCCACCAACAACAACACC
AACAACAACGCTTTTTCTCACACACACACACACACACCCGGTTTCTCTCT
CGCGCCGCTCCCCCGTTCTTACTAAATGTACCCACCGGACAACACGCCTG
TTGCTTATAACAATACAACATTTGGTAACGTTGACAGCATATCCCGGAAG
ATGACACCGATGCTAGCCTGCTCGCCCAAGTCGCTGACACGAGAACGGAG
AGCCGCAACAACAACGACACTTCGAGAGGGGCCCCGCAGCAGCGTGGCAG
GGCGGGAGGACCAGCGGCGGCGGGGGCATTGTCGTCGCCTCTCATGGGCA
GCAGAAGCAGCAGCAGCAGCGGCAGGGATAGTCAGCCCCGGGGGGGGGGG
CGGGCAGCGGCGGCGTCGCCCGTGCGATCAGAAGACGGGAATTTCGTGGA
CGGCGTTGGGGCTGGGTTGGGGGGGGGGGGGGGTAGGGGCGGAGATGGGG
ACGGAGCGAAACGGAGGATTAATGTGTCCGACCACCATGGGGTGAGCCGA
GGGTATTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18884:435..3043-

>mRNA_Ecto-sp13_S_contig18884.5961.1 ID=mRNA_Ecto-sp13_S_contig18884.5961.1|Name=mRNA_Ecto-sp13_S_contig18884.5961.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=882bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18884:435..3043- (Ectocarpus species13 EcNAP12_S_4_19m)
CGATTCTCAGCCAATGGGCAGCCGTACCAGCTGCAGCACAGCGACTACCT
TGGCGGCAAGGGGCTCGGCCTAGCCCGCCTACACACGCCGGCCGGTGCGG
TGGACCTTTACGTCTCGCACTTGCACGGAGACTACAGCCGGGCGAAGGGT
TCAAAAGACCCTGATAGGTACAAGTCGCACAGGGTGGCGCAAGCGTTCGA
GGTGGCGCACATCATCCGACTCACTTCCAGGAGCCCTCTGGTTTTACTCT
TGTCGGACCTGAACGCGGGCCCCGGGTCGATGCCGTACGGGCTCCAGCGC
AGCGTGGCGGGTCTGCTGGACGCGTTTGGTGAGGCTAGGCCCGACGAGGA
GGGCTTCACGTGCGAGGCCACCGACAATGTGTTTTCCAACGGAAGGGACC
CGCCGGCGAGACTGGACTACGTGCTCTTTAAGGCCTTGCCGCCACCCCTG
TGCGCGCCTCAGGCAGTGGAACCCACGTGGGAGCTAAGCAACTGCTGGGT
GCACCAAGCGCATATCCCGGAAGATGACACCGATGCTAGCCTGCTCGCCC
AAGTCGCTGACACGAGAACGGAGAGCCGCAACAACAACGACACTTCGAGA
GGGGCCCCGCAGCAGCGTGGCAGGGCGGGAGGACCAGCGGCGGCGGGGGC
ATTGTCGTCGCCTCTCATGGGCAGCAGAAGCAGCAGCAGCAGCGGCAGGG
ATAGTCAGCCCCGGGGGGGGGGGCGGGCAGCGGCGGCGTCGCCCGTGCGA
TCAGAAGACGGGAATTTCGTGGACGGCGTTGGGGCTGGGTTGGGGGGGGG
GGGGGGTAGGGGCGGAGATGGGGACGGAGCGAAACGGAGGATTAATGTGT
CCGACCACCATGGGGTGAGCCGAGGGTATTAG
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