mRNA_Ecto-sp13_S_contig18854.5944.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18854.5944.1 vs. uniprot
Match: D7FTM3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTM3_ECTSI) HSP 1 Score: 267 bits (683), Expect = 2.360e-87 Identity = 128/135 (94.81%), Postives = 132/135 (97.78%), Query Frame = 1
Query: 1 DIWRVWSAAKSGEDKRLSYMLSLPRASVDARDPDSGWTALHFASRQGKLATVRVLIENQAFVGARAPGGRTPLHHAAGWGTYEVCFALLQAGADKTARDSEGQTAQHLAECRQRGKVVTLLDGWRPLGLTATQTQ 405
D+W VWSAAKSGEDKRLSYMLSLPRA+VDARDPDSGWTALHFASRQGKLATVRVLIENQAFVGARAPGGRTPLH AAGWGTYEVCFALLQAGADKTARDS+G+TAQHLAE RQRGKVVTLLDGWRPLGLTATQTQ
Sbjct: 16 DVWSVWSAAKSGEDKRLSYMLSLPRANVDARDPDSGWTALHFASRQGKLATVRVLIENQAFVGARAPGGRTPLHLAAGWGTYEVCFALLQAGADKTARDSKGETAQHLAEYRQRGKVVTLLDGWRPLGLTATQTQ 150
BLAST of mRNA_Ecto-sp13_S_contig18854.5944.1 vs. uniprot
Match: A0A7S1UK03_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UK03_9STRA) HSP 1 Score: 111 bits (278), Expect = 8.890e-27 Identity = 59/131 (45.04%), Postives = 81/131 (61.83%), Query Frame = 1
Query: 1 DIWRVWSAAKSGEDKRLSYML-SLPRASVDARDPDSGWTALHFASRQGKLATVRVLIENQAFVGARAPGGRTPLHHAAGWGTYEVCFALLQAGADKTARDSEGQTAQHLAECRQRGKVVTLLDGWRPLGLT 390
D VW AAK GE +RL +L R RDP++G+TALH+A+R G+L ++L++ A V AR RTPLH AAGWGT +V L+ +GAD T D+ G TA LAE +R + ++D W P+G+T
Sbjct: 162 DATTVWYAAKVGELERLEAILHGRGRDMAMKRDPENGYTALHYAARGGRLECAKLLLDFGADVNARGTDSRTPLHLAAGWGTQQVVVYLMGSGADATWPDATGVTAARLAEQAERFAIADVIDRWLPVGIT 292
BLAST of mRNA_Ecto-sp13_S_contig18854.5944.1 vs. uniprot
Match: A0A7S3UV55_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV55_HETAK) HSP 1 Score: 94.0 bits (232), Expect = 3.630e-21 Identity = 51/129 (39.53%), Postives = 69/129 (53.49%), Query Frame = 1
Query: 13 VWSAAKSGEDKRLSYMLSLPRASVDARDPDSGWTALHFASRQGKLATVRVLIENQAFVGARAPGGRTPLHHAAGWGTYEVCFALLQAGADKTARDSEGQTAQHLAECRQRGKVVTLLDGWRPLGLTATQ 399
+W AA + RL + P VD RDPDSG TAL A+R G A V+ L A + P G TPL AA +G+ + +L+AG DKT ++S G+ +A R R VV LL+ W P+G T +
Sbjct: 1 IWYAAANNSFDRLEKLRDRPNFRVDERDPDSGQTALALAARNGHEAMVQELFRLGADPNRQDPNGNTPLFAAAAFGSTRIVALMLEAGGDKTMKNSVGEQPSDVARKRLRFDVVKLLEWWNPVGYTVEE 129
BLAST of mRNA_Ecto-sp13_S_contig18854.5944.1 vs. uniprot
Match: A0A4C1UCU8_EUMVA (Ankyrin repeat domain-containing protein 39 n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1UCU8_EUMVA) HSP 1 Score: 79.0 bits (193), Expect = 5.960e-16 Identity = 45/109 (41.28%), Postives = 68/109 (62.39%), Query Frame = 1
Query: 13 VWSAAKSGEDKRLSYMLSL---PRASVDARDPDSGWTALHFASRQGKLATVRVLIENQAFVGARAPGGR-TPLHHAAGWGTYEVCFALLQAGADKTARDSEGQTAQHLA 327
+W AA SG++KR+ ++S PR V A D +SG+TALH+A+R G L + L++N A + A G+ TPL AA G +V L++AGA+ +D++G+TA H A
Sbjct: 7 IWFAASSGDEKRVESLISKSKNPREVVTAVD-NSGYTALHYAARNGYLEICQCLVKNGAIIDAVTKSGKATPLQRAATAGKIDVVVYLIEAGANPLLQDADGKTALHRA 114
BLAST of mRNA_Ecto-sp13_S_contig18854.5944.1 vs. uniprot
Match: S4PMZ1_9NEOP (Ankyrin repeat domain-containing protein 39 (Fragment) n=2 Tax=Pararge aegeria TaxID=116150 RepID=S4PMZ1_9NEOP) HSP 1 Score: 72.8 bits (177), Expect = 1.100e-13 Identity = 43/123 (34.96%), Postives = 74/123 (60.16%), Query Frame = 1
Query: 13 VWSAAKSGEDKRLSYMLSL---PRASVDARDPDSGWTALHFASRQGKLATVRVLIENQAFVGARAPGGR-TPLHHAAGWGTYEVCFALLQAGADKTARDSEGQTAQH-LAECRQRGKVVTLLD 366
+W+AA SGE R+ ++S P+ V+++D +SG+TALH+A+R G + +L++N A++ + G+ TPLH AA G L+Q A +D++G+TA H + E ++ G + LL+
Sbjct: 7 IWNAAFSGEKDRVLSLISKASSPKELVNSQD-NSGYTALHYAARNGHVDICSILLKNGAYINTQTRCGKATPLHKAAAAGKEATVKYLIQHRAQLDLQDADGKTALHKVVENKKHGLINVLLE 128
BLAST of mRNA_Ecto-sp13_S_contig18854.5944.1 vs. uniprot
Match: A0A6J1NDD5_BICAN (ankyrin repeat domain-containing protein 39-like isoform X1 n=1 Tax=Bicyclus anynana TaxID=110368 RepID=A0A6J1NDD5_BICAN) HSP 1 Score: 71.6 bits (174), Expect = 5.750e-13 Identity = 46/123 (37.40%), Postives = 69/123 (56.10%), Query Frame = 1
Query: 13 VWSAAKSGEDKRLSYMLSL---PRASVDARDPDSGWTALHFASRQGKLATVRVLIENQAFVGARAP-GGRTPLHHAAGWGTYEVCFALLQAGADKTARDSEGQTAQH-LAECRQRGKVVTLLD 366
+W+AA SGE R+ +++ P+ V++ D SG+TALH+A+R G + +L+EN A + G TPLH AA G E L+Q GA +D++G TA H + E + + V LLD
Sbjct: 33 IWNAAFSGETDRVQSLINKSRNPKDLVNSEDK-SGYTALHYAARNGHVDICSILVENGACINYPTRCGNATPLHKAAAAGKEETVKYLIQHGALLDLQDADGTTALHKVVENKNQNLVKILLD 154
BLAST of mRNA_Ecto-sp13_S_contig18854.5944.1 vs. uniprot
Match: UPI0015518DB9 (ankyrin repeat domain-containing protein n=1 Tax=Caenimonas soli TaxID=2735555 RepID=UPI0015518DB9) HSP 1 Score: 72.0 bits (175), Expect = 9.540e-13 Identity = 38/87 (43.68%), Postives = 50/87 (57.47%), Query Frame = 1
Query: 103 SGWTALHFASRQGKLATVRVLIENQAFVGARAPGGRTPLHHAAGWGTYEVCFALLQAGADKTARDSEGQTAQHLAECRQRGKVVTLL 363
+GWT LH+AS G LA + +L+EN A++ A +P G TPL AA +GT LL+AGAD R+ G TA A R V L+
Sbjct: 120 TGWTPLHYASTNGHLAIMELLLENHAYIDAESPNGSTPLMMAAHYGTPAAVKLLLEAGADPMLRNQLGLTAIDFAHRANRKDSVDLI 206
BLAST of mRNA_Ecto-sp13_S_contig18854.5944.1 vs. uniprot
Match: A0A8K0DCE8_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0DCE8_9COLE) HSP 1 Score: 69.7 bits (169), Expect = 3.960e-12 Identity = 42/114 (36.84%), Postives = 64/114 (56.14%), Query Frame = 1
Query: 13 VWSAAKSGEDKRLSYMLSLPRASVDARDPDSGWTALHFASRQGKLATVRVLIENQAFVGARAPGGR-TPLHHAAGWGTYEVCFALLQAGADKTARDSEGQTAQHLAECRQRGKV 351
+W AA+ G+ K++ +LS +VD RD +G+TALH+A+R G L +VL+ N A + + GR T LH A + LL+ A+ RDS+G+TA H A Q ++
Sbjct: 37 IWYAAQCGDTKKVEKLLS-QGTNVDQRD-SAGYTALHYAARNGHLDVCKVLLRNGADINSTTKSGRATALHRACSADKVHMVKFLLENKANGKIRDSDGKTALHRAAESQNKEI 148
BLAST of mRNA_Ecto-sp13_S_contig18854.5944.1 vs. uniprot
Match: UPI00096B4C65 (ankyrin repeat domain-containing protein 39 isoform X1 n=1 Tax=Aethina tumida TaxID=116153 RepID=UPI00096B4C65) HSP 1 Score: 68.2 bits (165), Expect = 8.160e-12 Identity = 43/120 (35.83%), Postives = 63/120 (52.50%), Query Frame = 1
Query: 13 VWSAAKSGEDKRLSYMLSLPRASVDARDPDSGWTALHFASRQGKLATVRVLIENQAFVGARAPGGR-TPLHHAAGWGTYEVCFALLQAGADKTARDSEGQTAQHLAECRQRGKVVTLLDG 369
+WSAA GE ++ L + V+ D G+TALH+A+R G+L + L++ A V + R TPLH A G V LL GAD + RDS+G+ A A+ R ++ +L G
Sbjct: 33 IWSAAMYGEIDKIKKCLD--KTDVNTTDK-YGFTALHYAARNGQLEACKYLVKRGANVNVQTKELRATPLHRAVSVGHQAVVEYLLSVGADASIRDSDGKLAVDRAKDNGRATIMAVLQG 149
BLAST of mRNA_Ecto-sp13_S_contig18854.5944.1 vs. uniprot
Match: UPI001CF722AB (ankyrin repeat domain-containing protein 39-like n=1 Tax=Tribolium madens TaxID=41895 RepID=UPI001CF722AB) HSP 1 Score: 70.1 bits (170), Expect = 1.010e-11 Identity = 44/118 (37.29%), Postives = 67/118 (56.78%), Query Frame = 1
Query: 13 VWSAAKSGEDKRLSYMLSLPRASVDARDPDSGWTALHFASRQGKLATVRVLIENQAFVGA-RAPGGRTPLHHAAGWGTYEVCFALLQAGADKTARDSEGQTAQHLAECRQRGKVVTLL 363
+WSAA+ G+ R ++L+ VD RD +G+TALH+A+R G L R+LI+ V A G TPLH AA G +E+ LL+ A+ +D++G+TA H A + ++ L
Sbjct: 127 LWSAAQYGDLDRTLHLLN-KGFRVDQRDA-AGYTALHYAARNGHLDVCRLLIDRGGCVDAVTCQGKATPLHRAATVGKFEIVKFLLEKKANCRLKDADGKTALHRAAASKHLQICEYL 242 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18854.5944.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18854.5944.1 >prot_Ecto-sp13_S_contig18854.5944.1 ID=prot_Ecto-sp13_S_contig18854.5944.1|Name=mRNA_Ecto-sp13_S_contig18854.5944.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=135bp DIWRVWSAAKSGEDKRLSYMLSLPRASVDARDPDSGWTALHFASRQGKLAback to top mRNA from alignment at Ecto-sp13_S_contig18854:1873..3365+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18854.5944.1 ID=mRNA_Ecto-sp13_S_contig18854.5944.1|Name=mRNA_Ecto-sp13_S_contig18854.5944.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1493bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18854:1873..3365+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18854:1873..3365+ >mRNA_Ecto-sp13_S_contig18854.5944.1 ID=mRNA_Ecto-sp13_S_contig18854.5944.1|Name=mRNA_Ecto-sp13_S_contig18854.5944.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=405bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18854:1873..3365+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |