prot_Ecto-sp13_S_contig1880.5925.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1880.5925.1
Unique Nameprot_Ecto-sp13_S_contig1880.5925.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length163
Homology
BLAST of mRNA_Ecto-sp13_S_contig1880.5925.1 vs. uniprot
Match: D8LNJ2_ECTSI (Hlip n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNJ2_ECTSI)

HSP 1 Score: 310 bits (795), Expect = 1.210e-105
Identity = 157/160 (98.12%), Postives = 159/160 (99.38%), Query Frame = 0
Query:    3 DDDTSSAVATKPKRKVNAELDDLVSEMAGRSDDDPIVIPRGAGIAPMAPGPIKPDPIPGMDDDDIPGKIVLPPDVLAEQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRSAMFGITVGMLTEYWTGQSIPQQIETFAQLLGLLPLDYDTYFQ 162
            DDDTSSAVATKPKRKVN ELDDLVSEMAGRSDD+PIVIPRGAGIAPMAPGPIKPDPIPGMDDDDIPGKIVLPP+VLAEQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRSAMFGITVGMLTEYWTGQSIPQQIETFAQLLGLLPLDYDTYFQ
Sbjct:   80 DDDTSSAVATKPKRKVNPELDDLVSEMAGRSDDEPIVIPRGAGIAPMAPGPIKPDPIPGMDDDDIPGKIVLPPEVLAEQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRSAMFGITVGMLTEYWTGQSIPQQIETFAQLLGLLPLDYDTYFQ 239          
BLAST of mRNA_Ecto-sp13_S_contig1880.5925.1 vs. uniprot
Match: A0A836CEG8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEG8_9STRA)

HSP 1 Score: 125 bits (315), Expect = 9.670e-34
Identity = 62/98 (63.27%), Postives = 80/98 (81.63%), Query Frame = 0
Query:   64 DDDIPGKIVLPPDVLAEQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRSAMFGITVGMLTEYWTGQSIPQQIETFAQLLGLLPLDYDTYF 161
            DD++PGKIV+    LA+QQ  LEK A+QLRR+RLD+EAE+A   G+ P AE+ NGR+AMF I VG+LTEYWTGQS+PQQ+ET A ++GLLPLDY++ F
Sbjct:   70 DDNVPGKIVVDDATLAQQQIDLEKYARQLRRQRLDREAEEARLLGWTPAAEINNGRAAMFFIVVGILTEYWTGQSMPQQVETMASVMGLLPLDYESMF 167          
BLAST of mRNA_Ecto-sp13_S_contig1880.5925.1 vs. uniprot
Match: A0A7V5I693_9BACT (Uncharacterized protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V5I693_9BACT)

HSP 1 Score: 90.1 bits (222), Expect = 4.930e-20
Identity = 44/87 (50.57%), Postives = 60/87 (68.97%), Query Frame = 0
Query:   67 IPGKIVLPPDVLAEQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRSAMFGITVGMLTEYWTGQSIPQQIETFAQLLGLL 153
            +PG+  L    LAEQ++ L  +A++ +  RL KEAE    FGFC  AE+ NGR+AMF    GMLTEYWTGQ++PQQIE   ++LG++
Sbjct:   56 VPGRYKLSAVELAEQRRALRAVAERYKAARLAKEAESRRVFGFCRNAEVINGRTAMFFFVTGMLTEYWTGQTMPQQIELLLRILGII 142          
BLAST of mRNA_Ecto-sp13_S_contig1880.5925.1 vs. uniprot
Match: M1V653_CYAM1 (Similar to high light inducible protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V653_CYAM1)

HSP 1 Score: 90.1 bits (222), Expect = 2.220e-19
Identity = 44/87 (50.57%), Postives = 60/87 (68.97%), Query Frame = 0
Query:   67 IPGKIVLPPDVLAEQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRSAMFGITVGMLTEYWTGQSIPQQIETFAQLLGLL 153
            +PG+  L    LAEQ++ L  +A++ +  RL KEAE    FGFC  AE+ NGR+AMF    GMLTEYWTGQ++PQQIE   ++LG++
Sbjct:  119 VPGRYKLSAIELAEQRRALRAVAERYKAARLAKEAESRRVFGFCRNAEVINGRTAMFFFVTGMLTEYWTGQTMPQQIELLLRILGII 205          
BLAST of mRNA_Ecto-sp13_S_contig1880.5925.1 vs. uniprot
Match: A0A7J7IMA7_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IMA7_9RHOD)

HSP 1 Score: 88.2 bits (217), Expect = 1.730e-18
Identity = 43/86 (50.00%), Postives = 59/86 (68.60%), Query Frame = 0
Query:   68 PGKIVLPPDVLAEQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRSAMFGITVGMLTEYWTGQSIPQQIETFAQLLGLL 153
            PG+  L    LAEQ++ +  +A++ + ER+ +EAE    FGFC  AE+ NGR+AMF    GMLTEYWTGQ++PQQIE   ++LG L
Sbjct:  137 PGRYKLSAAELAEQRRAIRAVAERYKAERIAREAEARRVFGFCRNAEIINGRTAMFFFATGMLTEYWTGQTMPQQIELLLRILGFL 222          
BLAST of mRNA_Ecto-sp13_S_contig1880.5925.1 vs. uniprot
Match: A9BKE1_HEMAN (Hlip n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A9BKE1_HEMAN)

HSP 1 Score: 84.0 bits (206), Expect = 8.950e-18
Identity = 41/87 (47.13%), Postives = 61/87 (70.11%), Query Frame = 0
Query:   67 IPGKIVLPPDVLAEQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRSAMFGITVGMLTEYWTGQSIPQQIETFAQLLGLL 153
            IPGKI+L   V++E++  L+ ++++ ++ER+ KE  D   FGF   +E+ NGR AMF I  G+LTE WTGQ+IP QIET  + LG++
Sbjct:   45 IPGKIILSKTVISERELKLKSLSEKWKKERIAKENFDKKAFGFTKNSEILNGRIAMFFIITGLLTEIWTGQTIPDQIETIIRTLGII 131          
BLAST of mRNA_Ecto-sp13_S_contig1880.5925.1 vs. uniprot
Match: A0A5J4YWB8_PORPP (Light-harvesting complex-like protein OHP2, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YWB8_PORPP)

HSP 1 Score: 84.3 bits (207), Expect = 1.440e-17
Identity = 42/86 (48.84%), Postives = 60/86 (69.77%), Query Frame = 0
Query:   68 PGKIVLPPDVLAEQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRSAMFGITVGMLTEYWTGQSIPQQIETFAQLLGLL 153
            PG   L P  LAEQ+K L  ++++ + ER+D+E E +  FG   RAE+ NGR AMF +  G+LTEYWTG++IP+Q+ET  + LGL+
Sbjct:   79 PGMRELTPAELAEQKKVLVALSEEWKAERMDREFEQSRLFGLTRRAEILNGRVAMFFLATGLLTEYWTGENIPEQVETLFRTLGLI 164          
BLAST of mRNA_Ecto-sp13_S_contig1880.5925.1 vs. uniprot
Match: A0A7S1Y0X3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y0X3_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.440e-17
Identity = 40/86 (46.51%), Postives = 57/86 (66.28%), Query Frame = 0
Query:   70 KIVLPPDVLAEQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRSAMFGITVGMLTEYWTGQSIPQQIETFAQLLGLLPL 155
            ++ LP + + +Q   LE++ +   RER  +E E+A   G+ P AE WN R+AMFG+ VG+LTEYWTG+SIPQQ+    + LG L L
Sbjct:   79 RVPLPQEFVDKQAVALEELRKDFLRERYAREDEEAKMLGWVPAAETWNARAAMFGVVVGLLTEYWTGESIPQQVAGLLKTLGFLDL 164          
BLAST of mRNA_Ecto-sp13_S_contig1880.5925.1 vs. uniprot
Match: A0A7S2P2S9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P2S9_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.680e-17
Identity = 41/92 (44.57%), Postives = 64/92 (69.57%), Query Frame = 0
Query:   65 DDIPGKIVLPPDVLAEQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRSAMFGITVGMLTEYWTGQSIPQQIETFAQLLGLLPLD 156
            +++PGK+V+    LA+Q   L ++ ++ R+ER+ KE ED    G+ P+AE++NGR AMF + VG+LTEYWTG +IP QIE   ++ G + +D
Sbjct:   64 ENVPGKVVMNEIDLAKQVSALNQLEEKWRKERVYKEYEDKALLGWTPQAEMYNGRFAMFFLVVGLLTEYWTGVTIPGQIEEMLRVGGFIDVD 155          
BLAST of mRNA_Ecto-sp13_S_contig1880.5925.1 vs. uniprot
Match: A0A6U3SNU5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SNU5_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 2.040e-17
Identity = 44/92 (47.83%), Postives = 61/92 (66.30%), Query Frame = 0
Query:   66 DIPGKIVLPPDVLAEQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRSAMFGITVGMLTEYWTGQSIPQQIETFAQLLGLLPLDY 157
            D+PGK+VL    LA Q   L K+ ++ R+ERL KE ++A   G+  +AE +NGR AMF + VG+LTEYWTG +IP QIE   ++ G +  DY
Sbjct:   88 DVPGKVVLNDVQLAAQVTALSKLEEKWRKERLQKEYDEARLLGWTSQAETYNGRFAMFFLVVGLLTEYWTGVTIPGQIEEMLRVGGFIGPDY 179          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1880.5925.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNJ2_ECTSI1.210e-10598.13Hlip n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNJ2_EC... [more]
A0A836CEG8_9STRA9.670e-3463.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7V5I693_9BACT4.930e-2050.57Uncharacterized protein n=1 Tax=bacterium TaxID=18... [more]
M1V653_CYAM12.220e-1950.57Similar to high light inducible protein n=1 Tax=Cy... [more]
A0A7J7IMA7_9RHOD1.730e-1850.00Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A9BKE1_HEMAN8.950e-1847.13Hlip n=1 Tax=Hemiselmis andersenii TaxID=464988 Re... [more]
A0A5J4YWB8_PORPP1.440e-1748.84Light-harvesting complex-like protein OHP2, chloro... [more]
A0A7S1Y0X3_9STRA1.440e-1746.51Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2P2S9_9STRA1.680e-1744.57Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A6U3SNU5_9STRA2.040e-1747.83Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 82..102
NoneNo IPR availablePANTHERPTHR33401:SF1LIGHT-HARVESTING COMPLEX-LIKE PROTEIN OHP2, CHLOROPLASTICcoord: 49..144
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 103..145
IPR037492Light-harvesting complex-like protein OHP2PANTHERPTHR33401FAMILY NOT NAMEDcoord: 49..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1880contigEcto-sp13_S_contig1880:3366..5839 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1880.5925.1mRNA_Ecto-sp13_S_contig1880.5925.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1880 3261..6853 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1880.5925.1 ID=prot_Ecto-sp13_S_contig1880.5925.1|Name=mRNA_Ecto-sp13_S_contig1880.5925.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=163bp
MSDDDTSSAVATKPKRKVNAELDDLVSEMAGRSDDDPIVIPRGAGIAPMA
PGPIKPDPIPGMDDDDIPGKIVLPPDVLAEQQKGLEKIAQQLRRERLDKE
AEDAITFGFCPRAELWNGRSAMFGITVGMLTEYWTGQSIPQQIETFAQLL
GLLPLDYDTYFQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037492OHP2