mRNA_Ecto-sp13_S_contig188.5923.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig188.5923.1
Unique NamemRNA_Ecto-sp13_S_contig188.5923.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig188.5923.1 vs. uniprot
Match: D8LQU4_ECTSI (rRNA adenine N(6)-methyltransferase (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQU4_ECTSI)

HSP 1 Score: 542 bits (1396), Expect = 2.400e-191
Identity = 285/326 (87.42%), Postives = 290/326 (88.96%), Query Frame = 1 
Query:    1 MSHQHHXXXXXXXXXXXXXXXXALVISIAGLLAAQGDAFSAATLRL-NGRQQHHAHSSRRVSTATGCVKEAGFAWGGSFVAPEKSSPTAIRGEAGGVEGRQPRHAMVVTMAT-GRGKGSGSANRKPPSLPQGEFRPKQSLGQNYLSDQNYVMKICNHFGDTSEGGRRVLELGPGTGALTQVLHERFPDMLAVDIDQRAIELLGSNMPSLNAVMSDVLQLDYTKLAELRGGPLSVIGNLPYHITSQILFTLCDHYQSVRRAVVTMQLEVAQRIVAKSSTKQYGILSVVFQLYARPQVLFQIPPTVFYPQPSVTSALISLDFTGEEGG 972
            MS+QHH                ALVISIAGLLAAQGDAFSA TLRL NGR QHHA+S RRVSTA GCVKEAGFAWGGSF+ PEK SPTAIRGEA GVEGRQP HA+VVTMA  GR      A RKPPSLPQGEFRPKQSLGQNYLSDQNYVMKICNHFGDTSEGGRRVLELGPGTGALTQVLHERFPDMLAVDIDQRAIELLGSNMPSLNAVMSDVLQLDYTKLAELRGGPLSVIGNLPYHITSQILFTLCDHYQSVRRAVVTMQLEVAQRIVAKSSTKQYGILSVVFQLYARPQVLFQIPPTVFYPQPSVTSALISLDFTG+  G
Sbjct:    1 MSYQHHRRKRQRGSSTPTAAAVALVISIAGLLAAQGDAFSATTLRLLNGRHQHHAYSRRRVSTAAGCVKEAGFAWGGSFIVPEKPSPTAIRGEAEGVEGRQPGHAVVVTMAAAGRXXXXXXAKRKPPSLPQGEFRPKQSLGQNYLSDQNYVMKICNHFGDTSEGGRRVLELGPGTGALTQVLHERFPDMLAVDIDQRAIELLGSNMPSLNAVMSDVLQLDYTKLAELRGGPLSVIGNLPYHITSQILFTLCDHYQSVRRAVVTMQLEVAQRIVAKSSTKQYGILSVVFQLYARPQVLFQIPPTVFYPQPSVTSALISLDFTGKGPG 326
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BLAST of mRNA_Ecto-sp13_S_contig188.5923.1 vs. uniprot
Match: A0A835Z0Q3_9STRA (rRNA adenine N(6)-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Q3_9STRA)

HSP 1 Score: 308 bits (788), Expect = 8.200e-101
Identity = 147/216 (68.06%), Postives = 179/216 (82.87%), Query Frame = 1 
Query:  313 MVVTMATGRGKGSGSANRKPPSLPQGEFRPKQSLGQNYLSDQNYVMKICNHFGDTSEGGRRVLELGPGTGALTQVLHERFPDMLAVDIDQRAIELLGSNMPSLNAVMSDVLQLDYTKLAELRGGPLSVIGNLPYHITSQILFTLCDHYQSVRRAVVTMQLEVAQRIVAKSSTKQYGILSVVFQLYARPQVLFQIPPTVFYPQPSVTSALISLDFTG 960
            M  + A G G+ +     +PP+LP GE++PKQSLGQN+LSDQNYVMKIC+ F D+S GGR V+ELGPG GALTQVLH ++PDM+AVDID+R+++ L   +P L  + SDVLQ+DYT+LAE RGG LS+IGNLPYHITSQILF LCDHY+S+ RAVV +QLEVAQRIVA  + K+YGILSVVFQLY RP++LF+IP TVFYPQP VTSAL+SLDFTG
Sbjct:   16 MDASGAGGSGRPAAPKKMRPPTLPAGEYKPKQSLGQNFLSDQNYVMKICSSFRDSSVGGRSVVELGPGAGALTQVLHAQYPDMMAVDIDERSVQFLAETLPGLTVLQSDVLQIDYTQLAEARGGQLSIIGNLPYHITSQILFMLCDHYRSIARAVVLLQLEVAQRIVAPPNCKEYGILSVVFQLYTRPRILFKIPATVFYPQPKVTSALLSLDFTG 231
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BLAST of mRNA_Ecto-sp13_S_contig188.5923.1 vs. uniprot
Match: W7U2X3_9STRA (rRNA adenine N(6)-methyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2X3_9STRA)

HSP 1 Score: 291 bits (746), Expect = 1.460e-92
Identity = 146/211 (69.19%), Postives = 173/211 (81.99%), Query Frame = 1 
Query:  322 TMATGRGKGSGSANRKPPSLPQGEFRPKQSLGQNYLSDQNYVMKICNHFGDTSEGGRRVLELGPGTGALTQVLHERFPDMLAVDIDQRAIELLGSNMPSLNAVMSDVLQLDYTKLAELRGGPLSVIGNLPYHITSQILFTLCDHYQSVRRAVVTMQLEVAQRIVAKSSTKQYGILSVVFQLYARPQVLFQIPPTVFYPQPSVTSALISLDF 954
            T A+  G    +   +PP+LP  EFRPKQSLGQN+LSDQNYV+KI     D S GGRRV+ELGPG GALT+VLH R+PDMLAV+ID RA+ LL   +PSLN V SDVLQ+D+T LAELRGGPLSVIGNLPYHITSQILF L D++++VR+AVVTMQLEVAQRIVA +  K YGILSV+FQLY RP++ F++PPTVFYPQP VTSAL++LDF
Sbjct:  123 TTASASGLAPPTDPTRPPTLPSQEFRPKQSLGQNFLSDQNYVLKIVQSLVDKSPGGRRVVELGPGPGALTRVLHRRYPDMLAVEIDPRAVALLNEALPSLNVVQSDVLQVDWTALAELRGGPLSVIGNLPYHITSQILFCLLDNHRTVRQAVVTMQLEVAQRIVAPTRCKDYGILSVLFQLYTRPRINFKLPPTVFYPQPKVTSALVTLDF 333
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BLAST of mRNA_Ecto-sp13_S_contig188.5923.1 vs. uniprot
Match: A0A7S3K3Y0_9STRA (rRNA adenine N(6)-methyltransferase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3Y0_9STRA)

HSP 1 Score: 273 bits (697), Expect = 3.200e-86
Identity = 131/199 (65.83%), Postives = 165/199 (82.91%), Query Frame = 1 
Query:  358 ANRKPPSLPQGEFRPKQSLGQNYLSDQNYVMKICNHFGDTSEGGRRVLELGPGTGALTQVLHERFPDMLAVDIDQRAIELLGSNMPSLNAVMSDVLQLDYTKLAELRGGPLSVIGNLPYHITSQILFTLCDHYQSVRRAVVTMQLEVAQRIVAKSSTKQYGILSVVFQLYARPQVLFQIPPTVFYPQPSVTSALISLDF 954
            + ++PP+LP G FRPKQSLGQNYLSDQNYV+KI     D S+ G  V+ELGPG GALT+VL   +P+M+AV+ID+RA++LL    PSL  + SDVL++DYTKLA+L+GG L+VIGNLPY+ITSQILF LCDH+ ++RRA VTMQ EVAQR+VA+  TK YGILSVVFQLYARPQ+LF+IP T FYPQP V+SAL++++F
Sbjct:   73 SGQRPPTLPSGTFRPKQSLGQNYLSDQNYVVKITESVEDDSKNGNTVVELGPGLGALTRVLLASYPEMIAVEIDKRAVDLLNERYPSLKVLHSDVLEIDYTKLAQLQGGRLNVIGNLPYYITSQILFALCDHHAAIRRACVTMQWEVAQRLVAQPRTKPYGILSVVFQLYARPQILFKIPNTAFYPQPKVSSALVAIEF 271
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BLAST of mRNA_Ecto-sp13_S_contig188.5923.1 vs. uniprot
Match: A0A4D9CR67_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CR67_9STRA)

HSP 1 Score: 286 bits (731), Expect = 1.010e-83
Identity = 141/196 (71.94%), Postives = 166/196 (84.69%), Query Frame = 1 
Query:  367 KPPSLPQGEFRPKQSLGQNYLSDQNYVMKICNHFGDTSEGGRRVLELGPGTGALTQVLHERFPDMLAVDIDQRAIELLGSNMPSLNAVMSDVLQLDYTKLAELRGGPLSVIGNLPYHITSQILFTLCDHYQSVRRAVVTMQLEVAQRIVAKSSTKQYGILSVVFQLYARPQVLFQIPPTVFYPQPSVTSALISLDF 954
            +PP+LP  EFRPKQSLGQN+LSDQNYV+KI     D S  GRRV+ELGPG GALT+VLH R+PDMLAV+ID RA+ LL   +PSL  V SDVLQ+D+T LAELRGGPLSVIGNLPYHITSQILF L D++++VR+AVVTMQLEVAQRIVA +  K YGILSV+FQLY RP++ F++PPTVFYPQP VTSAL++LDF
Sbjct:   89 RPPTLPSQEFRPKQSLGQNFLSDQNYVLKIVQSLVDKSPEGRRVVELGPGPGALTRVLHRRYPDMLAVEIDPRAVALLNEALPSLKVVQSDVLQVDWTALAELRGGPLSVIGNLPYHITSQILFCLLDNHRTVRQAVVTMQLEVAQRIVAPTRCKDYGILSVLFQLYTRPRINFKLPPTVFYPQPKVTSALVTLDF 284
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BLAST of mRNA_Ecto-sp13_S_contig188.5923.1 vs. uniprot
Match: A0A6V1RUH5_HETAK (rRNA adenine N(6)-methyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RUH5_HETAK)

HSP 1 Score: 264 bits (675), Expect = 3.590e-83
Identity = 131/222 (59.01%), Postives = 168/222 (75.68%), Query Frame = 1 
Query:  301 PRHAMVVTMATGRGKGSGSANRKPPSLPQGEFRPKQSLGQNYLSDQNYVMKICNHFGDTSEGGRRVLELGPGTGALTQVLHERFPDMLAVDIDQRAIELLGSNMPSLNAVMSDVLQLDYTKLAELRGGPLSVIGNLPYHITSQILFTLCDHYQSVRRAVVTMQLEVAQRIVAKSSTKQYGILSVVFQLYARPQVLFQIPPTVFYPQPSVTSALISLDFTGEE 966
            PR+ ++  M+T  G     +NR P +LPQGEFRPKQSLGQNYLSD NY+MKI +   D S  G RV+E+GPG GALT+ L  R+P+M AV+IDQR++ELL   +P    V SD LQ+++   A L+GG LSVIGNLPYHITSQILFTL D +Q +R+A VTMQ EVA+R+ A+  +K YGILSVVFQLY++P++LF+IPPTVFYPQP V SAL+ +DF  ++
Sbjct:   49 PRYTLLQ-MSTAEGSSDRPSNRAP-TLPQGEFRPKQSLGQNYLSDMNYIMKIVDSLADDSPDGSRVVEVGPGAGALTEQLARRYPEMTAVEIDQRSVELLKERLPGTRVVHSDCLQVNWPAFAALKGGRLSVIGNLPYHITSQILFTLADSHQFIRQAAVTMQWEVAERVCARPGSKDYGILSVVFQLYSKPKILFKIPPTVFYPQPKVASALLMVDFASKQ 268
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BLAST of mRNA_Ecto-sp13_S_contig188.5923.1 vs. uniprot
Match: F0Y6X2_AURAN (rRNA adenine N(6)-methyltransferase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6X2_AURAN)

HSP 1 Score: 256 bits (655), Expect = 1.620e-81
Identity = 133/194 (68.56%), Postives = 156/194 (80.41%), Query Frame = 1 
Query:  394 FRPKQSLGQNYLSDQNYVMKICNHFGDTSEGGRRVLELGPGTGALTQVLHERFPDMLAVDIDQRAIELLGSNMPSLNAVM-SDVLQLDYTKLAELRGGPLSVIGNLPYHITSQILFTLCDHYQSVRRAVVTMQLEVAQRIVAKSSTKQYGILSVVFQLYARPQVLFQIPPTVFYPQPSVTSALISLDFTGEEGG 972
            FRPKQSLGQNYLSDQNY  KI +  GD SE GRRV+ELGPG GALT++L  ++P+M+AV+ID RA+ELL    P+   V+ SDVL +DYTKLA  RGG LSVIGNLPY+ITSQILF LCDH+ SV RAVVTMQ EVA R+VAK  TK YGILSVVFQLYA+P++ F+IP T FYPQP VTSAL+++DF   EGG
Sbjct:    1 FRPKQSLGQNYLSDQNYATKIVDSLGDDSERGRRVVELGPGLGALTRLLLRQYPEMVAVEIDGRAVELLEQTYPAPFTVLHSDVLAVDYTKLAAARGGRLSVIGNLPYYITSQILFCLCDHHASVSRAVVTMQHEVALRLVAKPRTKDYGILSVVFQLYAQPKIAFKIPHTAFYPQPKVTSALVAIDFP--EGG 192
[Close]
BLAST of mRNA_Ecto-sp13_S_contig188.5923.1 vs. uniprot
Match: Q5ENQ8_HETTR (rRNA adenine N(6)-methyltransferase n=1 Tax=Heterocapsa triquetra TaxID=66468 RepID=Q5ENQ8_HETTR)

HSP 1 Score: 258 bits (658), Expect = 4.410e-80
Identity = 135/253 (53.36%), Postives = 177/253 (69.96%), Query Frame = 1 
Query:  223 GGSFVAPEKSSPTAIRGEAGGVEGRQPRHAMVVTMATGRGKG-----SGSANRKPPSLPQGEFRPKQSLGQNYLSDQNYVMKICNHFGDTSEGGRRVLELGPGTGALTQVLHERFPDMLAVDIDQRAIELLGSNMPSLNAVMSDVLQLDYTKLAELRGGPLSVIGNLPYHITSQILFTLCDHYQSVRRAVVTMQLEVAQRIVAKSSTKQYGILSVVFQLYARPQVLFQIPPTVFYPQPSVTSALISLDFTGEE 966
            G SFVA   S P + R     +  R    +  + +A  +  G     S S   + P+LP   F+PKQSL QN+L+D NYV K+ N   D S GG++VLELGPGTGALT  LH RFP+M+AVD+DQRA+ +L  N+P    + SDVL ++YTKLAE+RGGPL+++GNLPYH+TSQILFTL DH +SV+ A VTMQ EVA+RIVA+ +TK+YGILSV FQLYA P++LF IPP  F+P+P+V S+ + L+F   E
Sbjct:   52 GSSFVASWPSRPRSRRC----ITCRAQDDSNAIELAERKRDGAILPKSWSDKPRTPTLPATLFKPKQSLSQNFLADPNYVFKMVNAIEDDSPGGKQVLELGPGTGALTSRLHPRFPEMMAVDLDQRAMRVLAQNVPGCTVIRSDVLLINYTKLAEVRGGPLTIVGNLPYHVTSQILFTLADHAKSVKDAHVTMQKEVAERIVARPNTKKYGILSVCFQLYADPKILFDIPPNAFFPRPNVMSSYVKLNFADAE 300
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BLAST of mRNA_Ecto-sp13_S_contig188.5923.1 vs. uniprot
Match: A0A0G4G4E0_VITBC (rRNA adenine N(6)-methyltransferase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4G4E0_VITBC)

HSP 1 Score: 254 bits (648), Expect = 1.720e-79
Identity = 123/196 (62.76%), Postives = 154/196 (78.57%), Query Frame = 1 
Query:  367 KPPSLPQGEFRPKQSLGQNYLSDQNYVMKICNHFGDTSEGGRRVLELGPGTGALTQVLHERFPDMLAVDIDQRAIELLGSNMPSLNAVMSDVLQLDYTKLAELRGGPLSVIGNLPYHITSQILFTLCDHYQSVRRAVVTMQLEVAQRIVAKSSTKQYGILSVVFQLYARPQVLFQIPPTVFYPQPSVTSALISLDF 954
            +PP+LP GEFRPKQSLGQNYLSDQNYV KIC+   DTSEGG RV+ELGPG GALT++LHER+P M AV++D+RAI LL  N+P L+ +  DVLQ+++  LA  +GG +SVIGNLPY+ITSQILF L D Y ++ +AVVT Q EVA+R+ A+    QY ILSVVFQLY  P+++F+IPP VF+P P V SAL+ L F
Sbjct:   41 RPPTLPSGEFRPKQSLGQNYLSDQNYVRKICDALIDTSEGGSRVIELGPGAGALTRLLHERYPLMTAVELDERAISLLSRNIPDLDIIHDDVLQVNWMSLARAKGGRVSVIGNLPYYITSQILFCLVDSYPAIDQAVVTTQWEVAERLTARPGDSQYSILSVVFQLYCEPRIVFKIPPQVFFPVPKVDSALVHLRF 236
[Close]
BLAST of mRNA_Ecto-sp13_S_contig188.5923.1 vs. uniprot
Match: A0A7S2V1T1_9STRA (rRNA adenine N(6)-methyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1T1_9STRA)

HSP 1 Score: 253 bits (647), Expect = 3.210e-79
Identity = 125/204 (61.27%), Postives = 160/204 (78.43%), Query Frame = 1 
Query:  358 ANRKPPSLPQGEFRPKQSLGQNYLSDQNYVMKICNHFGDTSEGGRRVLELGPGTGALTQVLHERFPDMLAVDIDQRAIELLGSNMPSLNAVMSDVLQLDYTKLAELRGGPLSVIGNLPYHITSQILFTLCDHYQSVRRAVVTMQLEVAQRIVAKSSTKQYGILSVVFQLYARPQVLFQIPPTVFYPQPSVTSALISLDFTGEEG 969
            A+++ P+LP GEFRPKQSLGQNYLSD NY++KI N     S  G+R++ELGPG GALT+ L +R+P M A+++D RAIE L   +P L  + SDVLQ+++  L++L+GGPLSV+GNLPYHITSQILF L D+ Q+VR AVVT Q EVAQRI +  ++K YGILSVVFQL+ RP++LF+IP TVFYP P V SALI LDF+ +EG
Sbjct:   46 ASKRAPTLPSGEFRPKQSLGQNYLSDMNYILKIVNAMTCDSSDGQRLVELGPGMGALTRELIKRYPAMTAIEVDPRAIEQLNEALPDLTVIHSDVLQVNWPALSKLKGGPLSVVGNLPYHITSQILFGLADNPQAVRSAVVTTQWEVAQRICSGPNSKDYGILSVVFQLFTRPRILFKIPNTVFYPAPKVASALIELDFSAKEG 249
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig188.5923.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQU4_ECTSI2.400e-19187.42rRNA adenine N(6)-methyltransferase (Fragment) n=2... [more]
A0A835Z0Q3_9STRA8.200e-10168.06rRNA adenine N(6)-methyltransferase n=1 Tax=Tribon... [more]
W7U2X3_9STRA1.460e-9269.19rRNA adenine N(6)-methyltransferase n=1 Tax=Nannoc... [more]
A0A7S3K3Y0_9STRA3.200e-8665.83rRNA adenine N(6)-methyltransferase n=1 Tax=Aureou... [more]
A0A4D9CR67_9STRA1.010e-8371.94Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A6V1RUH5_HETAK3.590e-8359.01rRNA adenine N(6)-methyltransferase n=1 Tax=Hetero... [more]
F0Y6X2_AURAN1.620e-8168.56rRNA adenine N(6)-methyltransferase (Fragment) n=1... [more]
Q5ENQ8_HETTR4.410e-8053.36rRNA adenine N(6)-methyltransferase n=1 Tax=Hetero... [more]
A0A0G4G4E0_VITBC1.720e-7962.76rRNA adenine N(6)-methyltransferase n=2 Tax=Vitrel... [more]
A0A7S2V1T1_9STRA3.210e-7961.27rRNA adenine N(6)-methyltransferase n=1 Tax=Fibroc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig188contigEcto-sp13_S_contig188:89..5484 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score543.5
Seed ortholog evalue6.7e-152
Seed eggNOG ortholog2880.D8LQU4
Preferred nameTFB2M
Model size972
KEGG rclassRC00003,RC03257
KEGG koko:K14191,ko:K17653
KEGG ReactionR10716
Hectar predicted targeting categorychloroplast
GOsGO:0000154,GO:0000179,GO:0000959,GO:0001510,GO:0003674,GO:0003712,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006364,GO:0006390,GO:0006391,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0007005,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009058,GO:0009059,GO:0009295,GO:0009451,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022613,GO:0031167,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0032259,GO:0032774,GO:0034470,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0042254,GO:0042645,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097659,GO:0140053,GO:0140098,GO:0140102,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141
Exons5
EggNOG free text desc.rRNA (adenine-N6,N6-)-dimethyltransferase activity
EggNOG OGsCOG0030@1,KOG0820@2759
Ec32 ortholog descriptionchloroplast dimethyladenosine synthase
Ec32 orthologEc-24_002310.1
EC2.1.1.183
Cds size972
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009,ko03029
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462961.5783765-CDS-Ecto-sp13_S_contig188:88..3311681462961.5783765-CDS-Ecto-sp13_S_contig188:88..331Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig188 89..331 -
1681462961.5927625-CDS-Ecto-sp13_S_contig188:1329..14641681462961.5927625-CDS-Ecto-sp13_S_contig188:1329..1464Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig188 1330..1464 -
1681462961.6138558-CDS-Ecto-sp13_S_contig188:1971..20311681462961.6138558-CDS-Ecto-sp13_S_contig188:1971..2031Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig188 1972..2031 -
1681462961.628636-CDS-Ecto-sp13_S_contig188:3080..32271681462961.628636-CDS-Ecto-sp13_S_contig188:3080..3227Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig188 3081..3227 -
1681462961.6465623-CDS-Ecto-sp13_S_contig188:5097..54841681462961.6465623-CDS-Ecto-sp13_S_contig188:5097..5484Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig188 5098..5484 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig188.5923.1prot_Ecto-sp13_S_contig188.5923.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig188 89..5484 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig188.5923.1

>prot_Ecto-sp13_S_contig188.5923.1 ID=prot_Ecto-sp13_S_contig188.5923.1|Name=mRNA_Ecto-sp13_S_contig188.5923.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=324bp
MSHQHHRRKRQRESSTPTAAAVALVISIAGLLAAQGDAFSAATLRLNGRQ
QHHAHSSRRVSTATGCVKEAGFAWGGSFVAPEKSSPTAIRGEAGGVEGRQ
PRHAMVVTMATGRGKGSGSANRKPPSLPQGEFRPKQSLGQNYLSDQNYVM
KICNHFGDTSEGGRRVLELGPGTGALTQVLHERFPDMLAVDIDQRAIELL
GSNMPSLNAVMSDVLQLDYTKLAELRGGPLSVIGNLPYHITSQILFTLCD
HYQSVRRAVVTMQLEVAQRIVAKSSTKQYGILSVVFQLYARPQVLFQIPP
TVFYPQPSVTSALISLDFTGEEGG
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mRNA from alignment at Ecto-sp13_S_contig188:89..5484-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig188.5923.1 ID=mRNA_Ecto-sp13_S_contig188.5923.1|Name=mRNA_Ecto-sp13_S_contig188.5923.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5396bp|location=Sequence derived from alignment at Ecto-sp13_S_contig188:89..5484- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCGCACCAGCACCATCGCCGAAAACGTCAAAGAGAGTCCTCCACTCC
GACCGCGGCAGCCGTAGCCCTGGTCATCTCGATCGCTGGCCTTCTGGCCG
CACAAGGAGACGCATTCTCGGCTGCAACACTGCGGTTGAACGGCCGACAA
CAACATCATGCTCACTCGAGCCGTCGTGTCTCCACAGCTACAGGTTGCGT
CAAGGAAGCAGGGTTTGCATGGGGTGGTAGCTTCGTCGCACCAGAGAAGT
CATCGCCAACCGCTATCCGTGGAGAGGCTGGAGGCGTTGAGGGTCGACAG
CCGCGACATGCAATGGTCGTCACCATGGCTACTGGGAGAGGAAAGGGTAG
CGGTAGCGCCAACCGCAAGCCGCCTTCTCTACCTCAGGTGCGGTGTGCCG
TGCCGCCAGTTGTAGATGCTGGGGCGTCGAAAACGTGGTCCTTACAAGCA
TATGTCCAGCGTAGCCTTGTGGAGGCCGAACACACCGCTACGCACACGGC
CGGCCGTGTTGAGGTTTGCCTTTGGTGACATGACGTAAGATACGACGCCC
CCTGGACCGATTTGCAAAGCTCGTTTACTCCAGGAGGACGAGGATGACAA
AAACAAGGTGTACGAGACCGGAAAAACTCTCGACAAGGCAATTCCGACGC
TGCCATTTTCGGCACCGAAACCCCTTTTCCTGCCCGAGTATTTCGAGCTT
TGAAAATTGAACACCGCACCAGGGGGTGTGATATCTCTTTTAACCTATAG
CAGTACGGGCGGTCCTGCTGTTGTAGGTGATCAGTCACTCCCTGGAGTAC
TGCTGTACACCGCTTTTTAGGTGCCTAAGGTACGACGATCGAGCACAGGA
GGGGCTGTCTACGCCCCCCTGATCACGATCCTCTTGAGGAGTTTTTGGTG
TTAATATGTGATGATGTGTATGTATGAAGAGACTGCAGCAGGTGTTCGGC
CACCCAGTAGCTGCAATAGTCAATGTTCTCGACCGAGGGAGGCGCCGCAG
TATCGAACTACTTGCTGTCATAGCGTCAATTGCCCTTGGGCATTCAGTCC
AAACCACGGTCTCTCTTCTGAGATGCTGTAGGCCCCGAACCAGGAACTAT
TCGCGTCTCATATCACCATTTGAAGTTGATCCCATATCGGTGCACGCAGA
TACAGCAGCAAGCACATGCCGGGTTTTTTCGAAACTTGGAAGACTTGGCA
CTCGATAGACTTGCACCAGACTCTATTCGTAAACCTATGCAGTAGACGTG
AAATCACGGAGGATATACACAAACTCCAGGGTTCTGATGTGCGGGCACTC
ACTGCTGTTGTGAGTGCGGAGTAGCAAGCGGAGGCAACGAATTGCACGTT
CATTCAAGAGGAACCCGCCGACACGGGCTGTGCATCGGAAAATGCGAGAT
GTTTACATGCGATGTTGGTGGCGTCGGATGGTTCGAGGCGTAATATTTTT
GTGTCGCGATGGCCGCACGGGTTTACAACGCCGAATATGTCCCATGGAGT
CTGGCATGTGTAGCGTTGCGGGGACACCGGTTTAACGTCGGTTCCGCACG
ATAGCACACCCCCCGGACCGATTATCGGAGCTCGATATCTCGGCCGGAAA
AGCAGTGACGGTGCCGAAGATGGCAGCGTTGGGACCGTGTCGTCGAGAGC
TTTCCGAAAACGTATACTTCAATTTAGGCATCCTCTTCGTCGTGGAGTAG
TCGAGCTTTCAAAATCGCTCCAGCCATCTCTACCCTGCCTGCTGCTGCTG
CTTGTGCTGCTCTTCGAGCGAGAGATAGGATGCACGCACCCAATGTCCAA
TTCCCTGCCTCCATCTGCGCCTGCACGTCCTCCCCCCCGGGGGGAAGGGG
GGGGGGGGTCGTACAACGAGCGGGCATATAGCTCTCGCTTGACCTTCGCC
AACATTCGTCATTTCTCCGATTTTAGCTTGCTTCTTTTGAGTGGCGATGC
TCAGGCCACGGACATAGTGATGCCCATCCTATTAGCAGCAGCTCTCCAAG
AAATAGATGAAACGTAGGTTGATTGAAGAAACACATGACCTGGGTTTTCA
GGAATCATGTTCCCCGCTCCCTCCCCTTCCCCTTCAGCCTCCCCTTTTTA
TGGAAGGAAGACTTCCCCTCTTGTCCCCCCTTGGCTACACCGTACGCGAA
CACATTATTCAGGAGTCATGTTCACCGCTCCTCTCCCTTGTTCTAACCCT
CGAAATCCTCTTGCCGTCCCTTGGCTACATACTTTGCGGGATAATAACAA
AAAACAGGGCGAGTTTAGGCCGAAGCAGAGTCTCGGCCAGAACTACCTCT
CGGACCAGAACTACGTGATGAAGATCTGCAACCACTTCGGAGACACGTCG
GAGGGGGGCAGGCGGGTGTTGGAGCTTGGACCTGGCACCGGAGCTTTGAC
CCAGGTAAGGGCGGGTGAGAGGACCCACAAACAGTGGCGGGGTTCCTTGC
CTGTTGGCGTTTGTTCTGAGACCGAAAGGCAGCGCGTCGTTGAAGGGCTA
ATAGCTGCGCGTGCGATATGGGGCAGTTGGCTAGAAGTATATCCTATCGC
TTGAGGACTTCCGATTCCCATGTGTGGCCTCGACAACGAGTTGACGGAGA
AGGGTTGGGAGGTGTAGGGGGTTAATGCTGTAGTTAGAATCGTCCATGGA
CCGCGAGGTCGTGTGGCAGCATCAAAGTAAGGGGGTTTTCCATCAAATAA
GACACTTATGTTGCCCACCATTCCCAGCATGAAAACGTTTCGGGGCGTTA
AGCGAGAGAGATATGGGGATGTATGATATTTTGGAAGTTTTCTTTTCTTG
GAGACAAATATTGGGTCGGGGATCAATAGGGGCACGCAGGATCTGTCCCG
TGGGGGGTACAAGTTGTGCTTGATACACGAGAGGCCTCCTGTTCGTCTGT
GCGATGTTGAACGAAAGCTTGGGGTTCGTTCGACGGGCAGTCTTTTGGCG
GCAGAATATCCCGGTGCCCAGACCCTGCATCTCTAGCTCTCGCGTGAAGT
CACCGTCGCATCAGCAATGTATGCAGCCGGGTTCTCTCTATGGTGCGGGT
GGGGGTGGACAGTAAGAGCCACACCACAGCAATGTGTCTCATTCCGACCC
GCCTCACTCTTCTGTGGTGCTTACGGTGATGGGTTGGATCGTTGCGCACA
CGCGAGTTATTTTGTGTCCACTCCATGGCCTCCAATACAAACCGGCGGCC
GAGAAGGTCCTGATGTATTGTTCTCCGCGTGTGACCCTCCGTATTCAATT
CTGCTGCTGTGCCAGGCCCTGGAATGCAGCTTCCTTTCTTGCTTCAGCAA
TATCGTGCATGAGTCGCTCTGCCTTCGTCCGTTTCTCGTCCTCGTCTTTC
AGACCCTTTTGTGTGCATGGCGTCATTTCGCCACGGCAGTATTTCGCATG
ACCCGCTCTGCCCCTGCCCTTTCTTCATCTCGTCTTTTTGGTCGCTGTTT
CAGGTTTTGCACGAGAGGTTTCCCGACATGCTGGCCGTGGACATCGACCA
GAGAGCGATCGAGGTACGGCAGCAGTGTAGGCAACGCAAGAGCCAGCCCA
GCCCCTCGTGGATGCATTGTTCGGACGTTGCATATTGTGGTGTGCGTATC
TCTTGTATGCAACAAGAGTAGGCCTAGCCCTCGTGAATATTTGGATGTGG
TGCGCGTATCGCTCAGATATAGCAGGAGTACTTGTAGTGGTCCTGATAAG
ACAGGAATAGGTTTCAGCCCTCGTGGATAGTTTGGAAATGATCCGTGTAC
GACAGTGCTCCTGAAAAGACATCATTCCGTACCTTTTGCTCCTCCGGTTG
ATCCCGAGTGGTGTGCGTCTGGCCAACCGCGTTGATGCTGCTGCGACTGC
CGTGGGGTATTGTATCGCCGCCGCTTCTACTGCTGCTGCTGCTGATGATG
ATGATGATGATGATGATGCACTACTGTTGATGTAGCCCTCCCTACCTCGA
ATGTCACACTTATCCGACTTTCGCCCCGCTCTTCCCACGCTCTTGGACGG
TCGTCCCTGGTGTCCGGTAGCTGCTGGGCAGCAACATGCCGTCCCTGAAC
GCGGTCATGTCGGACGTCCTGCAGCTGGACTACACCAAGCTAGCGGAGCT
GAGAGGGGGACCGCTGTCCGTGATTGGCAACCTCCCCTACCACATCACCA
GCCAGGTATTGATCCACCGCCGCCCCCATTCTTTGCGTGGGTTTCCATCG
CTTGGCAACGACGTTAAAAAACACGCCGATCGCTTCGTGAGGTGGACAAC
CAGGTTGCCGGGGGGGGGGTTGCCGTTGGTGTTCTTTTTCGGTGACCTTG
ATGGTGGCCAAGTGTTATGCGGAGTCCAGAGCCTTCACTCCCCGCCAAAG
GAGATGATAGCACGACGTTGTGTTGAATTGGTCAAGCATCCTCAAGTCAG
TTACGCGCTTTTATCTGTCTCTGGGAGTGAAAGCACCAGAAAATTGATCA
AGCCACTCGCAGCTGTCCTCCGTTTGCAAGGAAGTAAGCACAAGGTGCAG
GATGTAGCGCACCCCCCATGCTCGTCAGTCGCGGGAGCAACATGCTCTCC
ACCCGCGCCCCCTTCAGCCATCCCTTGTTCCAGTTTTTCCTGTCGGGGTA
TCCATTGGCAACGTATGTCGGATGCATGCGTAGAGATCGCGCTTGCCGGA
GGTATCGAGCACACACCGGCCGGCCGGGATTTCCCCCAACTTTTGTTTTT
CCTCTCATGGCTGGAATCGGCTCCTGGCGACGATGAGAAAAATGGGGGGT
TTCATTTATAGGTAATTTACACAACGCAGACACGGAACCCCCCCCTAAGC
CGACCCTACCCATTGACTTTGTTCGGGTACATGCAATAGTGCTGCACTCT
CTTTCTCTTCGTGTAACAATAATCGAAAGCATGCAGGTGGGTATGGGGGC
GTCGGGAGGAAGGACCCTTCTGTGTGGCCATGGATTCGAGCCACCTTCTA
CCCGGCGGAACCGCTGAAATAGAGGGATGGATAGTAAAAAAAAAACGGTA
GTGAAACGCCATGCTTCGCGCAAGTTCTCTTCACCGGATGCCGTAGGGAC
TTTACTTTTCGACGGGTACATCTCTCTCCCTCGCGCGCACATTCTTCTCT
CTATGTGCCCTAGTAACGCTATCTTTCGACGGTTCACTCTTTCTCACCCG
CAGATCCTCTTCACCCTGTGCGACCACTACCAAAGCGTGCGGAGGGCGGT
GGTGACGATGCAGCTGGAGGTAGCCCAGAGGATCGTGGCCAAGTCCTCGA
CCAAGCAGTACGGGATCCTGAGCGTGGTGTTCCAGCTGTACGCGAGGCCG
CAGGTCCTCTTCCAGATCCCCCCGACCGTGTTCTACCCCCAGCCCAGCGT
TACCTCGGCGCTGATCAGCCTCGACTTTACGGGTGAGGAGGGGGGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig188:89..5484-

>mRNA_Ecto-sp13_S_contig188.5923.1 ID=mRNA_Ecto-sp13_S_contig188.5923.1|Name=mRNA_Ecto-sp13_S_contig188.5923.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=972bp|location=Sequence derived from alignment at Ecto-sp13_S_contig188:89..5484- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCGCACCAGCACCATCGCCGAAAACGTCAAAGAGAGTCCTCCACTCC
GACCGCGGCAGCCGTAGCCCTGGTCATCTCGATCGCTGGCCTTCTGGCCG
CACAAGGAGACGCATTCTCGGCTGCAACACTGCGGTTGAACGGCCGACAA
CAACATCATGCTCACTCGAGCCGTCGTGTCTCCACAGCTACAGGTTGCGT
CAAGGAAGCAGGGTTTGCATGGGGTGGTAGCTTCGTCGCACCAGAGAAGT
CATCGCCAACCGCTATCCGTGGAGAGGCTGGAGGCGTTGAGGGTCGACAG
CCGCGACATGCAATGGTCGTCACCATGGCTACTGGGAGAGGAAAGGGTAG
CGGTAGCGCCAACCGCAAGCCGCCTTCTCTACCTCAGGGCGAGTTTAGGC
CGAAGCAGAGTCTCGGCCAGAACTACCTCTCGGACCAGAACTACGTGATG
AAGATCTGCAACCACTTCGGAGACACGTCGGAGGGGGGCAGGCGGGTGTT
GGAGCTTGGACCTGGCACCGGAGCTTTGACCCAGGTTTTGCACGAGAGGT
TTCCCGACATGCTGGCCGTGGACATCGACCAGAGAGCGATCGAGCTGCTG
GGCAGCAACATGCCGTCCCTGAACGCGGTCATGTCGGACGTCCTGCAGCT
GGACTACACCAAGCTAGCGGAGCTGAGAGGGGGACCGCTGTCCGTGATTG
GCAACCTCCCCTACCACATCACCAGCCAGATCCTCTTCACCCTGTGCGAC
CACTACCAAAGCGTGCGGAGGGCGGTGGTGACGATGCAGCTGGAGGTAGC
CCAGAGGATCGTGGCCAAGTCCTCGACCAAGCAGTACGGGATCCTGAGCG
TGGTGTTCCAGCTGTACGCGAGGCCGCAGGTCCTCTTCCAGATCCCCCCG
ACCGTGTTCTACCCCCAGCCCAGCGTTACCTCGGCGCTGATCAGCCTCGA
CTTTACGGGTGAGGAGGGGGGG
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