mRNA_Ecto-sp13_S_contig1879.5921.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1879.5921.1 vs. uniprot
Match: D8LCU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCU0_ECTSI) HSP 1 Score: 337 bits (863), Expect = 3.030e-111 Identity = 160/163 (98.16%), Postives = 162/163 (99.39%), Query Frame = 1
Query: 289 MNGIKLLKSDGWTCGAGGGATVYIFEYDRRFDQAYPESFVYYDFNEPLAVPDDLRGSVDYILMDPPYLNPECIGKFLETADVIARRPRAAVAGDGDGKEEAAPPVTPMMFITSPLNHAYLRENMGLRRTPYRLAFKSKFATPMSLYTNYPSDALGGWAEDEED 777
MNGIKLLKSDGWTCGAGGGATVYIFEYDRRFDQAYPESFVYYDFNEPLAVPDDLRGSVDYILMDPPYLNPECIGKFLETADVIARRPRAAVAGDGDGKEEAAPPVTPMMFITSPLNHAYLRENMGLRRTPY+LAFKSKFATPMSLYTNYPSDALGGW E+EED
Sbjct: 1 MNGIKLLKSDGWTCGAGGGATVYIFEYDRRFDQAYPESFVYYDFNEPLAVPDDLRGSVDYILMDPPYLNPECIGKFLETADVIARRPRAAVAGDGDGKEEAAPPVTPMMFITSPLNHAYLRENMGLRRTPYQLAFKSKFATPMSLYTNYPSDALGGWVEEEED 163
BLAST of mRNA_Ecto-sp13_S_contig1879.5921.1 vs. uniprot
Match: A0A835ZDP6_9STRA (Putative N6-adenine methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDP6_9STRA) HSP 1 Score: 156 bits (395), Expect = 1.190e-41 Identity = 74/144 (51.39%), Postives = 103/144 (71.53%), Query Frame = 1
Query: 352 VYIFEYDRRFDQAYPESFVYYDFNEPLAVPDDLRGSVDYILMDPPYLNPECIGKFLETADVIARRPRAAVAGDGDGKEEAAPP--VTPMMFITSPLNHAYLRENMGLRRTPYRLAFKSKFATPMSLYTNYPSDALGGWAEDEED 777
V+IFEYD RF +AYP FV YD+N PL VP+ LRG+ DY+L DPPYLNP+C+ +F +T ++AR P +A +AAP VTPMMF+TSP NHA L +MG+RRTP+++ F+SKFATP++++ NY S LG + ++ +
Sbjct: 16 VHIFEYDARFGKAYPVQFVQYDYNHPLDVPEHLRGACDYVLADPPYLNPQCVTEFFQTMQLLARVPWSA---------DAAPDAEVTPMMFVTSPRNHAQLLRDMGMRRTPFQVKFQSKFATPIAIFLNYRSTRLGDFVHEDPE 150
BLAST of mRNA_Ecto-sp13_S_contig1879.5921.1 vs. uniprot
Match: A0A6G0XCF8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XCF8_9STRA) HSP 1 Score: 150 bits (380), Expect = 9.020e-39 Identity = 91/233 (39.06%), Postives = 130/233 (55.79%), Query Frame = 1
Query: 67 LSADTLAALNAHLAVKGAAEGEEADSEGAKGTLVTEDFGLSQFWYDDDTQRAMAGEVLREARGGKAAIISAPSVMNGIKLLKSDGWTCGAGGGATVYIFEYDRRFDQAYPESFVYYDFNEPLAVPDDLRGSVDYILMDPPYLNPECIGKFLETADVIARRPRAAVAGDGDGKEEAAPPVTPMMFITSPLNHAYLRENMGLRRTPYRLAFKSKFATPMSLYTNYPSDALGGWAE 765
LSA+TLAAL+AHLA A EE+ T ++EDF LSQFWYDD T +A E L +++GG A +S P+ +K L+ + VYIFEYD RF YP+ FV+YD+ PLAV G DY+L++PPYL +C+ F ET +I+R + +G K+ A TP +FI + +RE +GL + + F+SK + ++ Y NY S+ G + E
Sbjct: 12 LSAETLAALHAHLA---AVNTEES-------TDISEDFRLSQFWYDDKTGETLAREALEKSKGGPIAFLSTPAAFKALKKLEPER--------KDVYIFEYDHRFGDKYPDEFVFYDYIAPLAVDSKFHGFFDYVLVEPPYLTEQCLKGFGETMRLISRELKKTASG----KQVMA---TPNVFINTGNLRDVMREELGLEPSGFVPTFESKLSNRLTTYINYDSERFGPYEE 219
BLAST of mRNA_Ecto-sp13_S_contig1879.5921.1 vs. uniprot
Match: W4FCM6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FCM6_9STRA) HSP 1 Score: 147 bits (370), Expect = 2.410e-37 Identity = 91/229 (39.74%), Postives = 125/229 (54.59%), Query Frame = 1
Query: 67 LSADTLAALNAHLAVKGAAEGEEADSEGAKGTLVTEDFGLSQFWYDDDTQRAMAGEVLREARGGKAAIISAPSVMNGIKLLKSDGWTCGAGGGATVYIFEYDRRFDQAYPESFVYYDFNEPLAVPDDLRGSVDYILMDPPYLNPECIGKFLETADVIARRPRAAVAGDGDGKEEAAPPVTPMMFITSPLNHAYLRENMGLRRTPYRLAFKSKFATPMSLYTNYPSDALG 753
LSA+TLAAL AHLA A+ E AD E V+EDF LSQFWYDD T A+A E L ++GG A +S P+ +K L+ + VYIFEYD RF Q Y + FV+YD+N PL V DY+L++PPYL +C+ F ET +I+R V GK+ +TP +FI S + + +GL + + F+SK + ++ Y NY S+ G
Sbjct: 9 LSAETLAALQAHLAATQIAD-ESADDE------VSEDFRLSQFWYDDVTGEALAREALEMSKGGPIAFLSTPAAYKALKKLEPER--------KNVYIFEYDHRFGQKYGDEFVFYDYNAPLDVDAKFHNFFDYVLVEPPYLTEQCMKGFGETMKLISRE----VVPTDHGKKVM---ITPNVFINSGALKEAMADELGLTPSGFVPTFESKLSNRLTTYVNYSSERFG 215
BLAST of mRNA_Ecto-sp13_S_contig1879.5921.1 vs. uniprot
Match: W2PIG9_PHYPN (Uncharacterized protein n=16 Tax=Phytophthora TaxID=4783 RepID=W2PIG9_PHYPN) HSP 1 Score: 146 bits (369), Expect = 4.560e-37 Identity = 90/237 (37.97%), Postives = 128/237 (54.01%), Query Frame = 1
Query: 67 LSADTLAALNAHLAVKGAAEGEEADSEGAKGTLVTEDFGLSQFWYDDDTQRAMAGEVLREARGGKAAIISAPSVMNGIKLLKSDGWTCGAGGGATVYIFEYDRRFDQAYPESFVYYDFNEPLAVPDDLRGSVDYILMDPPYLNPECIGKFLETADVIARRPRAAVAGDGDGKEEAAPPVTPMMFITSPLNHAYLRENMGLRRTPYRLAFKSKFATPMSLYTNYPSDALGGWAEDEED 777
LSADTLAAL AHL + + K V+EDF LSQFWYDD T RA+A E + +++ + A +S P+ LK + G V++FEYDRRFD+ Y FV+Y++NEP +PD DY+L+DPPYLN C+GKF ET +A+ + GK+ A +TP FIT+ + + ++G + + F+SK + YTNY S+ G E+ D
Sbjct: 9 LSADTLAALQAHLQTQ----------QAQKDAAVSEDFRLSQFWYDDRTGRALAQEAIDQSKEKRIAFVSTPAAYR--DFLKIQEESDSPIKGDNVFLFEYDRRFDEKYSGHFVFYNYNEPTNLPDKFHHFFDYVLVDPPYLNTNCMGKFAETMRWLAKDVESV-----PGKK--AKILTPCTFITARMLRKDIYADLGFTPSGFTPTFESKLSNQFLTYTNYRSERFGESTENFGD 226
BLAST of mRNA_Ecto-sp13_S_contig1879.5921.1 vs. uniprot
Match: A0A3R7K1S2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K1S2_9STRA) HSP 1 Score: 146 bits (369), Expect = 4.690e-37 Identity = 89/242 (36.78%), Postives = 128/242 (52.89%), Query Frame = 1
Query: 67 LSADTLAALNAHLAVKGAAEGEEADSEGAKGTLVTEDFGLSQFWYDDDTQRAMAGEVLREARGGKAAIISAPSVMNGIKLLKSDGWTCGAGGGATVYIFEYDRRFDQAYPESFVYYDFNEPLAVPDDLRGSVDYILMDPPYLNPECIGKFLETADVIARRPRAAVAGDGDGKEEAAPPVTPMMFITSPLNHAYLRENMGLRRTPYRLAFKSKFATPMSLYTNYPSDALG------GWAEDEE 774
LSADTLAAL AHL + A+ V+EDF LSQFWYDD T R +A E + ++ A +S P+ ++ + T G V++FE+DRRFD+ Y + FV+YD+N P +P+ DY+L+DPPYLNP C+GKF ET ++R A V G D + P FIT+ + + ++G + + F+SK + YTNY S+ G G ++DEE
Sbjct: 9 LSADTLAALQAHLQ----------SQQAAQDANVSEDFRLSQFWYDDKTGRTLAQEAVDHSKDKHIAFVSTPAAYRDFLKIQEESDT--PINGDNVFLFEFDRRFDEKYGDHFVFYDYNTPTELPEKFHHFFDYVLVDPPYLNPNCMGKFAETMRWLSRDVEA-VTGQNDKI------LNPCTFITARMLRKNIYADLGFTPSGFYPTFESKLSNQFLTYTNYRSECFGESTEEFGDSDDEE 231
BLAST of mRNA_Ecto-sp13_S_contig1879.5921.1 vs. uniprot
Match: A0A024UFC1_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UFC1_9STRA) HSP 1 Score: 145 bits (365), Expect = 1.210e-36 Identity = 89/237 (37.55%), Postives = 125/237 (52.74%), Query Frame = 1
Query: 67 LSADTLAALNAHLAVKGAAEGEEADSEGAKGTLVTEDFGLSQFWYDDDTQRAMAGEVLREARGGKAAIISAPSVMNGIKLLKSDGWTCGAGGGATVYIFEYDRRFDQAYPESFVYYDFNEPLAVPDDLRGSVDYILMDPPYLNPECIGKFLETADVIARRPRAAVAGDGDGKEEAAPPVTPMMFITSPLNHAYLRENMGLRRTPYRLAFKSKFATPMSLYTNYPSDALGGWAEDEED 777
LSA+TLAAL AHLA A EE++ V+EDF LSQFWYD T A+A E +++GG A +S P+ +K L D VY+FEYD RF++ YP FV+YD+N PLA+ + DY+L+DPPYLN C+ KF +T +++ V+ G + TP FIT+ + + ++G T + F SK + YTNY S+ G +D D
Sbjct: 8 LSAETLAALQAHLAT--AKLNEESE--------VSEDFRLSQFWYDSRTGDALAAEAFEQSKGGPIAFVSTPAAFKALKALHPDR--------KDVYLFEYDHRFEEKYPTEFVFYDYNTPLALDSKFQHFFDYVLVDPPYLNINCMSKFAQTMRFLSKD----VSARGQIQ-------TPNAFITAHMLRKDIAADLGFTPTGFVPTFDSKLSNRFLTYTNYASERFGRCDDDFSD 215
BLAST of mRNA_Ecto-sp13_S_contig1879.5921.1 vs. uniprot
Match: A0A6G0WNY0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WNY0_9STRA) HSP 1 Score: 143 bits (360), Expect = 6.210e-36 Identity = 88/237 (37.13%), Postives = 125/237 (52.74%), Query Frame = 1
Query: 67 LSADTLAALNAHLAVKGAAEGEEADSEGAKGTLVTEDFGLSQFWYDDDTQRAMAGEVLREARGGKAAIISAPSVMNGIKLLKSDGWTCGAGGGATVYIFEYDRRFDQAYPESFVYYDFNEPLAVPDDLRGSVDYILMDPPYLNPECIGKFLETADVIARRPRAAVAGDGDGKEEAAPPVTPMMFITSPLNHAYLRENMGLRRTPYRLAFKSKFATPMSLYTNYPSDALGGWAEDEED 777
LSA+TLAAL AHLA A EE++ V+EDF LSQFWYD T A+A E L E+ GG A +S P+ +K ++ D VY+FEYD RF++ YP FV+YD+N PL + Y+L+DPPYLN C+ KF +T +++ D G+ + TP FIT+ + + +++G + + F+SK + YTNY S+ G ED D
Sbjct: 8 LSAETLAALQAHLAT--AKLNEESE--------VSEDFRLSQFWYDKKTGDALALEALEESNGGPIAFVSTPAAFKALKAIEPDR--------KDVYLFEYDHRFEEKYPMEFVFYDYNTPLEIDAKFHHFFSYVLVDPPYLNVNCMSKFAQTMRWLSKDV------DSQGRIQ-----TPNAFITAQMLRKDIYKDLGFTPSGFIPTFESKLSNQFLTYTNYTSERFGPCDEDFSD 215
BLAST of mRNA_Ecto-sp13_S_contig1879.5921.1 vs. uniprot
Match: A0A485LNA9_9STRA (Aste57867_23683 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LNA9_9STRA) HSP 1 Score: 142 bits (358), Expect = 1.300e-35 Identity = 91/236 (38.56%), Postives = 127/236 (53.81%), Query Frame = 1
Query: 67 LSADTLAALNAHLA---VKGAAEGEEADSEGAKGTLVTEDFGLSQFWYDDDTQRAMAGEVLREARGGKAAIISAPSVMNGIKLLKSDGWTCGAGGGATVYIFEYDRRFDQAYPESFVYYDFNEPLAVPDDLRGSVDYILMDPPYLNPECIGKFLETADVIARRPRAAVAGDGDGKEEAAPPVTPMMFITSPLNHAYLRENMGLRRTPYRLAFKSKFATPMSLYTNYPSDALGGWAE 765
LS +TLAAL AHLA V+ A E D V+EDF LSQFWYDD T A+A E L +++GG A +S P+ +K L+ + VYIFEYD RF Q Y + FV+YD+N PL V DY+L++PPYL C+ F ET +I+R+ +G+++ VTP +FI S + E +GL + + F+SK + ++ Y NY SD G + E
Sbjct: 9 LSPETLAALQAHLATVQVEDAVASTEKD--------VSEDFRLSQFWYDDVTGEALAREALEKSKGGPIAFLSTPAAFKALKKLEPER--------KDVYIFEYDHRFGQKYGDQFVFYDYNAPLDVDAKFHKFFDYVLVEPPYLTETCMKGFGETMRLISRQVTRE-----EGQKDVL--VTPNVFINSGALREAMFEELGLTPSGFVPTFESKLSNRLTTYINYESDRFGKYDE 221
BLAST of mRNA_Ecto-sp13_S_contig1879.5921.1 vs. uniprot
Match: A0A1V9ZB50_9STRA (N(6)-adenine-specific DNA methyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZB50_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.850e-35 Identity = 90/234 (38.46%), Postives = 122/234 (52.14%), Query Frame = 1
Query: 67 LSADTLAALNAHLAVKGAAEGEEADSEGAKGTLVTEDFGLSQFWYDDDTQRAMAGEVLREARGGKAAIISAPSVMNGIKLLKSDGWTCGAGGGATVYIFEYDRRFDQAYPESFVYYDFNEPLAVPDDLRGSVDYILMDPPYLNPECIGKFLETADVIARRPRAAVAGDGDGKEEAAPPVTPMMFITSPLNHAYLRENMGLRRTPYRLAFKSKFATPMSLYTNYPSDALGGWAED 768
LSA+TLAAL AHL AA+ EE D++ V+EDF LSQFWYD T A+A E + + GG A +S P+ +K L D VY+FEYD RF YP+ F +YD+N PL V DY+L+DPPYLN C+ KF ET ++++ A G + TP FIT+ + + + +G T + F+SK + YTNY S+ G ED
Sbjct: 8 LSAETLAALQAHLT---AAKLEE-DND------VSEDFRLSQFWYDAKTGDALALEAMDHSNGGPIAFVSTPAAFKALKALYPDR--------DNVYLFEYDYRFQDKYPDEFAFYDYNSPLEVDAKFHHFFDYVLVDPPYLNTNCMSKFAETMRLLSKNVDAKDGAKGIIR-------TPNAFITASVLRKDMFKELGFTPTGFVPTFESKLSNHFLTYTNYTSERFGPCTED 216 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1879.5921.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1879.5921.1 >prot_Ecto-sp13_S_contig1879.5921.1 ID=prot_Ecto-sp13_S_contig1879.5921.1|Name=mRNA_Ecto-sp13_S_contig1879.5921.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=260bp MSRSRSSSTSSDGESPEITLDALSADTLAALNAHLAVKGAAEGEEADSEGback to top mRNA from alignment at Ecto-sp13_S_contig1879:11139..15405+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1879.5921.1 ID=mRNA_Ecto-sp13_S_contig1879.5921.1|Name=mRNA_Ecto-sp13_S_contig1879.5921.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4267bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1879:11139..15405+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1879:11139..15405+ >mRNA_Ecto-sp13_S_contig1879.5921.1 ID=mRNA_Ecto-sp13_S_contig1879.5921.1|Name=mRNA_Ecto-sp13_S_contig1879.5921.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=780bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1879:11139..15405+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |