prot_Ecto-sp13_S_contig18789.5918.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18789.5918.1
Unique Nameprot_Ecto-sp13_S_contig18789.5918.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length281
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18789.5918.1 vs. uniprot
Match: A0A6H5KKF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKF4_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 7.300e-12
Identity = 39/47 (82.98%), Postives = 42/47 (89.36%), Query Frame = 0 
Query:    1 DKASSTVVETLLAAGADVSIRDKFRSSALDSASLCGHAPTIHALVRH 47
            DKA STV ETLLAAGAD+SIR+ FR+SALDSASL GH PTIHALVRH
Sbjct:  196 DKAHSTVDETLLAAGADLSIRNNFRASALDSASLHGHVPTIHALVRH 242
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18789.5918.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KKF4_9PHAE7.300e-1282.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 24..53
e-value: 150.0
score: 11.0
coord: 57..86
e-value: 0.64
score: 19.1
coord: 90..119
e-value: 630.0
score: 6.5
coord: 123..156
e-value: 1400.0
score: 3.8
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 124..152
e-value: 0.0018
score: 18.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 123..152
score: 9.778
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 57..89
score: 10.339
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..166
e-value: 2.5E-32
score: 114.1
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 6..153
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 6..87
e-value: 3.1E-7
score: 30.9
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..152
score: 34.137
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 4..85
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 4..85
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 54..152
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 54..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18789contigEcto-sp13_S_contig18789:2496..3392 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18789.5918.1mRNA_Ecto-sp13_S_contig18789.5918.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18789 2494..3392 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18789.5918.1 ID=prot_Ecto-sp13_S_contig18789.5918.1|Name=mRNA_Ecto-sp13_S_contig18789.5918.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=281bp
DKASSTVVETLLAAGADVSIRDKFRSSALDSASLCGHAPTIHALVRHGVG
VTSCDDRGDTALHKAALQDQAASVDALIEAGAGMEMKRTGGATPVWIAAF
FCSPKTLLALFLKGAITNAPDNRGKTPLHVACLPRGGDLAAVVDLLLRWG
ADETPWTTRAALRRKDSTTCPVTVRAPKKTSTGRSCCWPGLPPTGRGVAA
AGWSCSVHALRRRGSQTATAAVRWRGGKENQVLRVVDASRQAAGLMTSNP
RVRLAEGPCGVRWAGWWACSLRECFGRSSAF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom