prot_Ecto-sp13_S_contig18786.5916.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18786.5916.1
Unique Nameprot_Ecto-sp13_S_contig18786.5916.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length161
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18786.5916.1 vs. uniprot
Match: D8LR20_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR20_ECTSI)

HSP 1 Score: 261 bits (666), Expect = 2.980e-83
Identity = 158/161 (98.14%), Postives = 159/161 (98.76%), Query Frame = 0 
Query:    1 MADSGTERAMAPEDMPRLGPTWSRGGGMFKPPKRPEGHVEGEDGVGTXXXXXXXXXXXXRGSTLASSAADPPSRKAPPVFGHAARGGLEALASATTQRGFAPRDGSGGLSGGTAAVETGGVGGVRIAAGPXXXXXXXXGLGPPGRWERERTASIDKRKVCR 161
            MADSGTERAMAPEDMPRLGPTWSRGGGMFKPPKRPEGHVEGE+GVGTXXXXXXXXXXXXRGSTLASSAADPPSRKAPPVFGHAARGGLEALASATTQRGFAPRDGSGGLSGGTAAVETGGVGGVRIAAGPXXXXXXXXGLGPPGRWERER ASIDKRKV R
Sbjct:    1 MADSGTERAMAPEDMPRLGPTWSRGGGMFKPPKRPEGHVEGEEGVGTXXXXXXXXXXXXRGSTLASSAADPPSRKAPPVFGHAARGGLEALASATTQRGFAPRDGSGGLSGGTAAVETGGVGGVRIAAGPXXXXXXXXGLGPPGRWERERAASIDKRKVQR 161
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BLAST of mRNA_Ecto-sp13_S_contig18786.5916.1 vs. uniprot
Match: A0A6H5KUY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY1_9PHAE)

HSP 1 Score: 237 bits (604), Expect = 2.200e-76
Identity = 143/200 (71.50%), Postives = 146/200 (73.00%), Query Frame = 0 
Query:    1 MADSGTERAMAPEDMPRLGPTWSRGGGMFKPPKRPEGHVEG---------------------------------------EDGVGTXXXXXXXXXXXXRGSTLASSAADPPSRKAPPVFGHAARGGLEALASATTQRGFAPRDGSGGLSGGTAAVETGGVGGVRIAAGPXXXXXXXXGLGPPGRWERERTASIDKRKVCR 161
            MADSGTERAMAPEDMPRLGPTWSRGGGMFKPPKRPEGH+EG                                       E+GVGT            R STLASSAADPPSRKAPPVFGHAARGGLEALASATTQRGFAPRDGSGGLSGGTAAVETGGVGGVRIAAGPXXXXXXXXGLGPPGRW+RER ASIDKRKV R
Sbjct:    1 MADSGTERAMAPEDMPRLGPTWSRGGGMFKPPKRPEGHLEGVGHRTTLGEDWRVLGIGVSLNCWGVFRDKGLLLFAARDQEEGVGTGVPSPGTGAGGGRASTLASSAADPPSRKAPPVFGHAARGGLEALASATTQRGFAPRDGSGGLSGGTAAVETGGVGGVRIAAGPXXXXXXXXGLGPPGRWDRERAASIDKRKVQR 200
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18786.5916.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LR20_ECTSI2.980e-8398.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KUY1_9PHAE2.200e-7671.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18786contigEcto-sp13_S_contig18786:1977..3373 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18786.5916.1mRNA_Ecto-sp13_S_contig18786.5916.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18786 1765..3373 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18786.5916.1 ID=prot_Ecto-sp13_S_contig18786.5916.1|Name=mRNA_Ecto-sp13_S_contig18786.5916.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=161bp
MADSGTERAMAPEDMPRLGPTWSRGGGMFKPPKRPEGHVEGEDGVGTGAP
SPGTGAGGGRGSTLASSAADPPSRKAPPVFGHAARGGLEALASATTQRGF
APRDGSGGLSGGTAAVETGGVGGVRIAAGPPPPETGGGGLGPPGRWERER
TASIDKRKVCR
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