prot_Ecto-sp13_S_contig18779.5913.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18779.5913.1
Unique Nameprot_Ecto-sp13_S_contig18779.5913.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length314
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18779.5913.1 vs. uniprot
Match: D7FWS8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS8_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 1.000e-14
Identity = 44/88 (50.00%), Postives = 53/88 (60.23%), Query Frame = 0 
Query:  175 KPIDPQRMPTLVKLLDAVLEVEPWNTERHGKNTGRAWAECGERVPAYLK-GCRSRPHEFVRQNAFRLVRQLYAPNSHAARTWSPEVKQ 261
            +P   ++M  L++LLDAVLEVEPWN  RH K    AW ECG RVP YLK G R+ P   V+Q  FRL  QL  P +       PEVK+
Sbjct:   45 RPRRDEKMALLLRLLDAVLEVEPWNLARHTK-VSEAWEECGRRVPGYLKEGARTEPRLLVQQQVFRLGDQLIDPTAKTPWKSYPEVKR 131
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18779.5913.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWS8_ECTSI1.000e-1450.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18779contigEcto-sp13_S_contig18779:69..1804 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18779.5913.1mRNA_Ecto-sp13_S_contig18779.5913.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18779 27..1872 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18779.5913.1 ID=prot_Ecto-sp13_S_contig18779.5913.1|Name=mRNA_Ecto-sp13_S_contig18779.5913.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=314bp
MDGKGPEAAERERPDKQQQGTGNGGCGDLHFGCGRCCPCCDRITALLESG
AVKRARLDASQRDGGDGNESETVETGRPGEQQQQGAGNDKEPSGDDRQLH
ARKGGCASLLESGAVKRARLDDSQLSSSGRHYRRRRDDPEWRAAQAAKRA
QREHRDDPEWRAAEAAKRAQRKPPKPIDPQRMPTLVKLLDAVLEVEPWNT
ERHGKNTGRAWAECGERVPAYLKGCRSRPHEFVRQNAFRLVRQLYAPNSH
AARTWSPEVKQRVGALADKLTADPRYRDKFTRPTEDPTHGKPGTPQQQQE
RERREPEGTVANV*
back to top