prot_Ecto-sp13_S_contig18776.5912.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18776.5912.1
Unique Nameprot_Ecto-sp13_S_contig18776.5912.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length228
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18776.5912.1 vs. uniprot
Match: D7G219_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G219_ECTSI)

HSP 1 Score: 283 bits (725), Expect = 1.880e-84
Identity = 171/175 (97.71%), Postives = 173/175 (98.86%), Query Frame = 0 
Query:   53 MIEQLSELERRSDPVAIELAGVWTSSYAVVEREMKAAAKEERQRKVEEXRERKXXAKAQEAVAKKADLEEKKVERIYKKLXXKVLREQAREKERLSRALRRLFEAEVSKRRTFARQTLQTRADAEGMAAILRDDACEGLECRTEKQQAAEDREHDILQAALASARGTAQRGSGSS 227
            MIEQLSELERRSDPVAIELAGVWTSSYAVVEREMKAAAKEERQRKVEEXRERKXXAKAQEAVAKKADLEEKKVERIYKKLXXKVLREQAREKERLSRALRRLFEAEVSKRRTFARQTLQTRADAEGMAAILRDDACEGLECRTE+QQAAEDR+HDILQAALASARGT  RGSGSS
Sbjct:    1 MIEQLSELERRSDPVAIELAGVWTSSYAVVEREMKAAAKEERQRKVEEXRERKXXAKAQEAVAKKADLEEKKVERIYKKLXXKVLREQAREKERLSRALRRLFEAEVSKRRTFARQTLQTRADAEGMAAILRDDACEGLECRTEEQQAAEDRDHDILQAALASARGTVPRGSGSS 175
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BLAST of mRNA_Ecto-sp13_S_contig18776.5912.1 vs. uniprot
Match: A0A6H5KV10_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV10_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 5.130e-62
Identity = 132/143 (92.31%), Postives = 135/143 (94.41%), Query Frame = 0 
Query:   86 MKAAAKEERQRKVEEXRERKXXAKAQEAVAKKADLEEKKVERIYKKLXXKVLREQAREKERLSRALRRLFEAEVSKRRTFARQTLQTRADAEGMAAILRDDACEGLECRTEKQQAAEDREHDILQAALASARGTAQRGSGSSS 228
            MKAAAKEER RKVEE RERK  AKAQEAVAKKADLEEKKVERIYKKL  KVLREQAREKERLSRALRRLFEAEVSKRRTFARQTLQTRADAEGMAAILRDDACEGLECRTE+QQAAEDR+HD LQAALA+ARGTA RGSGSSS
Sbjct:    1 MKAAAKEERLRKVEEERERKREAKAQEAVAKKADLEEKKVERIYKKLEEKVLREQAREKERLSRALRRLFEAEVSKRRTFARQTLQTRADAEGMAAILRDDACEGLECRTEEQQAAEDRDHDTLQAALANARGTAPRGSGSSS 143
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BLAST of mRNA_Ecto-sp13_S_contig18776.5912.1 vs. uniprot
Match: D7G220_ECTSI (FYR N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G220_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 7.900e-21
Identity = 55/59 (93.22%), Postives = 55/59 (93.22%), Query Frame = 0 
Query:    1 KGYVFEAHRAEKTFKRITKANERTKGPSNVTERSTAKLAATGFRRNVLDGRTMIEQLSE 59
            KGYVFEAHRAEKTFKRITK NERTKGPSNVTERSTAKLAATGFR  V DGRTMIEQLSE
Sbjct:  889 KGYVFEAHRAEKTFKRITKVNERTKGPSNVTERSTAKLAATGFRA-VPDGRTMIEQLSE 946
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18776.5912.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G219_ECTSI1.880e-8497.71Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KV10_9PHAE5.130e-6292.31Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
D7G220_ECTSI7.900e-2193.22FYR N-terminal domain-containing protein n=2 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 82..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18776contigEcto-sp13_S_contig18776:702..3299 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18776.5912.1mRNA_Ecto-sp13_S_contig18776.5912.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18776 702..3299 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18776.5912.1 ID=prot_Ecto-sp13_S_contig18776.5912.1|Name=mRNA_Ecto-sp13_S_contig18776.5912.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=228bp
KGYVFEAHRAEKTFKRITKANERTKGPSNVTERSTAKLAATGFRRNVLDG
RTMIEQLSELERRSDPVAIELAGVWTSSYAVVEREMKAAAKEERQRKVEE
ERERKREAKAQEAVAKKADLEEKKVERIYKKLEEKVLREQAREKERLSRA
LRRLFEAEVSKRRTFARQTLQTRADAEGMAAILRDDACEGLECRTEKQQA
AEDREHDILQAALASARGTAQRGSGSSS
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