prot_Ecto-sp13_S_contig18770.5910.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18770.5910.1
Unique Nameprot_Ecto-sp13_S_contig18770.5910.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length460
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18770.5910.1 vs. uniprot
Match: A0A6H5KFC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFC2_9PHAE)

HSP 1 Score: 719 bits (1856), Expect = 2.580e-255
Identity = 393/460 (85.43%), Postives = 409/460 (88.91%), Query Frame = 0 
Query:    1 MHRTRGQQHHHGGFLSGATTGRATASVVPWMTMLFLVHSHFALATHTVFLETNMKEAWNALLSAGSXXXXXXXXXXXXAREIVDTMLADCHGRKSEGWGAECDRALYLESVLKKIDSSSSAGSTFATGAGPATNDTQQQQQQVALDSAADEIAVISEVELPFSAFFNEYAVPRRPVAILSGGGGAXXXXKSADATDGEERDDLGNQAMDTAQQDGEEENGQQRVQDLILSGIESCLPHSVDPAFGTVDGPLRACHDSLLESLPVPRYASEDFVQRFRGQDVLPVGEHAEVEHFVSGWQRLYRTRPGAYTPPTACPAGANTLISVMSGTLQVLVYSSADELPSLKPTFGNAPCSPVPSRTSAGDDGDSKSSKSEGDEHENIGEEEQFDVDNSTGEXREREEHRSGSGHAEETTTSTVLNPTREPLEEGFGLERTAADQQKQNFPMESLLNGGRVKDETEDS 460
            M RTR  + H GG LSGATT R TASVVPWMTMLFLVHS+F LATHTVFLETNMKEAW  LLSAG XXXXXXXXXXXXAREIVDTMLADCHGRKSEGWGAECDRALYLE+VLKKIDSSSSAGS FATGAG    DTQQQQ QVALDSAA+EIAVI E ELPFSAFF+EYAVPRRPVAILSGGGG     K ADA DG+E+ DLG+QAMDTAQQDGEEENGQQRVQDLILSGIESCLPHSVDPA GTVDGPLRACHDSLLESLP+PRYASEDFVQRFRGQDVLPVGEHAEVE FVSGWQR++RTRPGAYTPPTACPAGANTLI+VMSGTLQVLVYSSAD+LPSLKPTFGNAPC PVPSRTSAGDDGDSK        HEN G+EE+FDVDN TGEX     HRSGSGHAEETTTSTVLNPTREPLEEGFGLERT ADQQKQNF MES LN  RVKDETED+
Sbjct:    1 MRRTRSHKPHFGG-LSGATTERGTASVVPWMTMLFLVHSNFVLATHTVFLETNMKEAWTVLLSAGXXXXXXXXXXXXXAREIVDTMLADCHGRKSEGWGAECDRALYLETVLKKIDSSSSAGSIFATGAGATAEDTQQQQ-QVALDSAANEIAVIYEAELPFSAFFHEYAVPRRPVAILSGGGGVGGSGKPADAADGKEQGDLGDQAMDTAQQDGEEENGQQRVQDLILSGIESCLPHSVDPALGTVDGPLRACHDSLLESLPIPRYASEDFVQRFRGQDVLPVGEHAEVERFVSGWQRIHRTRPGAYTPPTACPAGANTLITVMSGTLQVLVYSSADKLPSLKPTFGNAPCPPVPSRTSAGDDGDSKXXXXXXXXHENNGDEERFDVDNGTGEXXXXXXHRSGSGHAEETTTSTVLNPTREPLEEGFGLERTVADQQKQNFSMESSLNEARVKDETEDT 458
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BLAST of mRNA_Ecto-sp13_S_contig18770.5910.1 vs. uniprot
Match: D8LI38_ECTSI (Fibronectin type-III domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI38_ECTSI)

HSP 1 Score: 573 bits (1476), Expect = 1.180e-195
Identity = 306/375 (81.60%), Postives = 316/375 (84.27%), Query Frame = 0 
Query:   86 MLADCHGRKSEGWGAECDRALYLESVLKKIDSSSSAGSTFATGAGPATNDTQQQQQQVALDSAADEIAVISEVELPFSAFFNEYAVPRRPVAILSGGGGAXXXXKSADATDGEERDDLGNQAMDTAQQDGEEENGQQRVQDLILSGIESCLPHSVDPAFGTVDGPLRACHDSLLESLPVPRYASEDFVQRFRGQDVLPVGEHAEVEHFVSGWQRLYRTRPGAYTPPTACPAGANTLISVMSGTLQVLVYSSADELPSLKPTFGNAPCSPVPSRTSAGDDGDSKSSKSEGDEHENIGEEEQFDVDNSTGEXREREEHRSGSGHAEETTTSTVLNPTREPLEEGFGLERTAADQQKQNFPMESLLNGGRVKDETEDS 460
            MLADCHGRKSEGWGAECDRALYLESVLKKIDSSSSAGSTFATGAG A  DTQQ QQQVALDSAA+EIAV+SE ELPFSAFF+EYAVPRRPVAILSGGGGA    K ADATDGEE+ DLG+QAM+TAQQDGEEENGQQRVQDLILSGIESCL HSVDPA GT DGPLRACHDSLLESLPVPRYASEDFVQRFRGQDVLPVGEHAEVE FVSGWQRL+RTRPGAYTPPTACPAGANTLI+VMSGTLQVLVYSSADELPSLKPTFGNAPCSPVPSRTSAGDDGDSK                          X          GHAEET TST  NPTREPLEEGFGLERT ADQQKQNF M S L+G RVKDETED+
Sbjct:    1 MLADCHGRKSEGWGAECDRALYLESVLKKIDSSSSAGSTFATGAGAAAEDTQQHQQQVALDSAANEIAVVSEAELPFSAFFHEYAVPRRPVAILSGGGGAGGSGKPADATDGEEQGDLGDQAMNTAQQDGEEENGQQRVQDLILSGIESCLAHSVDPALGTADGPLRACHDSLLESLPVPRYASEDFVQRFRGQDVLPVGEHAEVERFVSGWQRLHRTRPGAYTPPTACPAGANTLITVMSGTLQVLVYSSADELPSLKPTFGNAPCSPVPSRTSAGDDGDSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHAEETITSTASNPTREPLEEGFGLERTTADQQKQNFSMMSSLDGARVKDETEDT 375
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18770.5910.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KFC2_9PHAE2.580e-25585.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI38_ECTSI1.180e-19581.60Fibronectin type-III domain-containing protein n=1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18770contigEcto-sp13_S_contig18770:3..2081 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18770.5910.1mRNA_Ecto-sp13_S_contig18770.5910.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18770 3..2081 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18770.5910.1 ID=prot_Ecto-sp13_S_contig18770.5910.1|Name=mRNA_Ecto-sp13_S_contig18770.5910.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=460bp
MHRTRGQQHHHGGFLSGATTGRATASVVPWMTMLFLVHSHFALATHTVFL
ETNMKEAWNALLSAGSSSSNSTSSGGGGAREIVDTMLADCHGRKSEGWGA
ECDRALYLESVLKKIDSSSSAGSTFATGAGPATNDTQQQQQQVALDSAAD
EIAVISEVELPFSAFFNEYAVPRRPVAILSGGGGAGGSGKSADATDGEER
DDLGNQAMDTAQQDGEEENGQQRVQDLILSGIESCLPHSVDPAFGTVDGP
LRACHDSLLESLPVPRYASEDFVQRFRGQDVLPVGEHAEVEHFVSGWQRL
YRTRPGAYTPPTACPAGANTLISVMSGTLQVLVYSSADELPSLKPTFGNA
PCSPVPSRTSAGDDGDSKSSKSEGDEHENIGEEEQFDVDNSTGEEREREE
HRSGSGHAEETTTSTVLNPTREPLEEGFGLERTAADQQKQNFPMESLLNG
GRVKDETEDS
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