mRNA_Ecto-sp13_S_contig1877.5909.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1877.5909.1
Unique NamemRNA_Ecto-sp13_S_contig1877.5909.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1877.5909.1 vs. uniprot
Match: D7FLZ2_ECTSI (Autophagy-related protein3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLZ2_ECTSI)

HSP 1 Score: 464 bits (1195), Expect = 2.320e-160
Identity = 263/273 (96.34%), Postives = 263/273 (96.34%), Query Frame = 1 
Query:  217 GGEGGATDQDGVAAGLGAIQLVESHFTSPAKAAASTADTATALQEAARETPTASGAIADFSGSGEEXXXXXXXXXXXXXXXXXXXGMLEDEDCPDLDSYVEDNLMQGDEATVQAGGVSYLTAQEPDDPILPTRSYDLSITYDKHHQTPRMFLFGYDESGQPLSAEEVFEDVMQDYARQTVTMEPHPHLSSHHASVHPCKHASTMKIMLENLTKGGKEARVDQYLFIFLKFIQSVVPTIDYDYTMSVDAGGGNNNDTSEPDLDDAFVDVAETSP 1035
            GGEGGATDQDGVAAGLGAIQLVESHFTSPAKAA STADTA ALQEAARET TASGAIADF      XXXXXXXXXXXXXXXXXXXGMLEDEDCPDLDSYVEDNLMQGDEATVQAGGVSYLTAQEPDDPILPTRSYDLSITYDKHHQTPRMFLFGYDESGQPL AEEVFEDVMQDYARQTVTMEPHPHLSSHHASVHPCKHASTMKIMLENLTKGGKEARVDQYLFIFLKFIQSVVPTIDYDYTMSVDAGGGNNNDTSEPDLDDAFVDVAETSP
Sbjct:  165 GGEGGATDQDGVAAGLGAIQLVESHFTSPAKAATSTADTAAALQEAARETSTASGAIADFXXXXXXXXXXXXXXXXXXXXXXXXXGMLEDEDCPDLDSYVEDNLMQGDEATVQAGGVSYLTAQEPDDPILPTRSYDLSITYDKHHQTPRMFLFGYDESGQPLPAEEVFEDVMQDYARQTVTMEPHPHLSSHHASVHPCKHASTMKIMLENLTKGGKEARVDQYLFIFLKFIQSVVPTIDYDYTMSVDAGGGNNNDTSEPDLDDAFVDVAETSP 437
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BLAST of mRNA_Ecto-sp13_S_contig1877.5909.1 vs. uniprot
Match: A0A6U3QBA0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3QBA0_9STRA)

HSP 1 Score: 204 bits (518), Expect = 7.740e-61
Identity = 99/162 (61.11%), Postives = 127/162 (78.40%), Query Frame = 1 
Query:  484 DEDCPDLDSYVEDNLMQGDEATVQAGGVSYLTAQEPDDPILPTRSYDLSITYDKHHQTPRMFLFGYDESGQPLSAEEVFEDVMQDYARQTVTMEPHPHLSSHHASVHPCKHASTMKIMLENLTK--GGKEARVDQYLFIFLKFIQSVVPTIDYDYTMSVDAG 963
            + D  DL ++ EDN+M+ D AT+ AGG  Y+ AQEP+D +L  R+YDLSITYDK++QTPRM+LFGYDE  QPL+ E+ FED++ DYA++TVTM+ HPHLS  HASVHPCKHA+ MK +++NL    GG   R+DQYLFIFLKF+ SVVPTI+YD+T  V AG
Sbjct:   63 ESDYADLSTFEEDNIMEPDAATLGAGGAGYMIAQEPEDTVLRVRTYDLSITYDKYYQTPRMWLFGYDEDDQPLTYEQTFEDIISDYAQRTVTMDMHPHLSLAHASVHPCKHANVMKRIVDNLVANGGGAVPRIDQYLFIFLKFLGSVVPTIEYDFTFEVAAG 224
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BLAST of mRNA_Ecto-sp13_S_contig1877.5909.1 vs. uniprot
Match: A0A835YXZ6_9STRA (Putative autophagocytosis associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXZ6_9STRA)

HSP 1 Score: 205 bits (521), Expect = 4.790e-60
Identity = 104/165 (63.03%), Postives = 129/165 (78.18%), Query Frame = 1 
Query:  496 PDLDSYVEDNLMQGDEATVQAG-------GVSYLTAQEPDDPILPTRSYDLSITYDKHHQTPRMFLFGYDESGQPLSAEEVFEDVMQDYARQTVTMEPHPHLS--SHHASVHPCKHASTMKIMLENLTKGG-KEARVDQYLFIFLKFIQSVVPTIDYDYTMSVDA 960
            PDLD++VEDN+++ D AT+  G       G SY+TA+EP D I+ TRSYDLSITYDK++Q PR++L GYDE+G PLS    FED+MQDYARQTVT+EPHPH    +H ASVHPC+HA+ M+ ++ NL  GG + ARVDQYLF+FLKFIQSV PTIDYDYTM +DA
Sbjct:  165 PDLDTFVEDNVVEPDAATLAPGAGAGGXAGGSYMTAEEPQDAIVRTRSYDLSITYDKYYQVPRIWLAGYDEAGAPLSPSATFEDIMQDYARQTVTIEPHPHAGGGAHAASVHPCRHAAVMRRIVANLAAGGGRAARVDQYLFVFLKFIQSVCPTIDYDYTMEIDA 329
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BLAST of mRNA_Ecto-sp13_S_contig1877.5909.1 vs. uniprot
Match: A0A7S2GA68_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GA68_9STRA)

HSP 1 Score: 190 bits (482), Expect = 1.050e-56
Identity = 89/134 (66.42%), Postives = 113/134 (84.33%), Query Frame = 1 
Query:  571 YLTAQEPDDPILPTRSYDLSITYDKHHQTPRMFLFGYDESGQPLSAEEVFEDVMQDYARQTVTMEPHPHLSSHHASVHPCKHASTMKIMLENLTKGGKEARVDQYLFIFLKFIQSVVPTIDYDYTM-SVDAGGG 969
            Y+ AQEPDD ++ TR+YDLSITYDK++QTPR++LFGY E G PLS E+ FED++QDYA++TVT++PHPHL+  HASVHPCKH++ MK ++ENL  GG E ++DQY+FIFLKFI SVVPTI+YDYTM S  AG G
Sbjct:    8 YMVAQEPDDNVVATRTYDLSITYDKYYQTPRVWLFGYSELGSPLSPEQTFEDIIQDYAQRTVTIDPHPHLNEPHASVHPCKHSAVMKRIVENLIAGGSEPKIDQYIFIFLKFIGSVVPTIEYDYTMASATAGTG 141
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BLAST of mRNA_Ecto-sp13_S_contig1877.5909.1 vs. uniprot
Match: A0A421FX50_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FX50_9STRA)

HSP 1 Score: 193 bits (490), Expect = 1.520e-55
Identity = 104/170 (61.18%), Postives = 125/170 (73.53%), Query Frame = 1 
Query:  499 DLDSYVE-DNLMQGDEATVQAGGVSYLTAQEPDDP---ILPTRSYDLSITYDKHHQTPRMFLFGYDESGQPLSAEEVFEDVMQDYARQTVTMEPHPHLSSH-HASVHPCKHASTMKIMLENLT-----------KGGKEARVDQYLFIFLKFIQSVVPTIDYDYTMSVDA 960
            DL SY E DNL++ DEA +   G SYL A EPDD    IL TR+YDLSITYDK++QTPR++LFGYDE   PLS E+VFED+MQDYA +TVTMEPHPHLSS  HAS+HPC+H + MK ++ NL            +   E R DQYLF+FLKFIQSV+PTIDYDYT+ V+A
Sbjct:  150 DLSSYEEEDNLVEEDEAALGPSGSSYLVASEPDDADDAILRTRTYDLSITYDKYYQTPRVWLFGYDERNAPLSGEQVFEDIMQDYANRTVTMEPHPHLSSLVHASIHPCQHGAVMKRIIANLKARKPGEEETADQAANEIRSDQYLFLFLKFIQSVIPTIDYDYTIEVNA 319
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BLAST of mRNA_Ecto-sp13_S_contig1877.5909.1 vs. uniprot
Match: A0A3R7KIS0_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KIS0_9STRA)

HSP 1 Score: 193 bits (490), Expect = 2.290e-55
Identity = 104/170 (61.18%), Postives = 125/170 (73.53%), Query Frame = 1 
Query:  499 DLDSYVE-DNLMQGDEATVQAGGVSYLTAQEPDDP---ILPTRSYDLSITYDKHHQTPRMFLFGYDESGQPLSAEEVFEDVMQDYARQTVTMEPHPHLSSH-HASVHPCKHASTMKIMLENLT-----------KGGKEARVDQYLFIFLKFIQSVVPTIDYDYTMSVDA 960
            DL SY E DNL++ DEA +   G SYL A EPDD    IL TR+YDLSITYDK++QTPR++LFGYDE   PLS E+VFED+MQDYA +TVTMEPHPHLSS  HAS+HPC+H + MK ++ NL            +   E R DQYLF+FLKFIQSV+PTIDYDYT+ V+A
Sbjct:  165 DLSSYEEEDNLVEEDEAALGPSGSSYLVASEPDDADDAILRTRTYDLSITYDKYYQTPRVWLFGYDERNAPLSGEQVFEDIMQDYANRTVTMEPHPHLSSLVHASIHPCQHGAVMKRIIANLKARKPGEEETADQAANEIRSDQYLFLFLKFIQSVIPTIDYDYTIEVNA 334
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BLAST of mRNA_Ecto-sp13_S_contig1877.5909.1 vs. uniprot
Match: A0A7S3XUZ8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUZ8_HETAK)

HSP 1 Score: 183 bits (465), Expect = 6.930e-54
Identity = 94/164 (57.32%), Postives = 129/164 (78.66%), Query Frame = 1 
Query:  487 EDCPDLDSYVEDNLM-QG-DEATVQAGGVSYLTAQEP----DDPILPTRSYDLSITYDKHHQTPRMFLFGYDESGQPLSAEEVFEDVMQDYARQTVTMEPHPHLSSHHASVHPCKHASTMKIMLENLTKGGKEARVDQYLFIFLKFIQSVVPTIDYDYTMSVDA 960
            E+  D+  + E NL+ +G D+AT+Q     Y+TA+EP    +D IL TR+YD+SITYDK++QTPR++LFGYDE  QPLSA+++FEDVMQD+ RQTVTME HP L + HAS+HPC+H + M+ ++  L+ GG+E  V QYLFIFLKFIQS++PT++YDYTMSV++
Sbjct:    1 EEYTDMAWFEEPNLLAEGVDQATLQPS--MYMTAEEPPPGENDNILRTRTYDVSITYDKYYQTPRVWLFGYDEDQQPLSADQIFEDVMQDHVRQTVTMENHPQLETVHASIHPCQHGAVMQRIVRGLSAGGREPEVQQYLFIFLKFIQSMIPTVEYDYTMSVES 162
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BLAST of mRNA_Ecto-sp13_S_contig1877.5909.1 vs. uniprot
Match: F0W7Y3_9STRA (Autophagocytosis associated protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W7Y3_9STRA)

HSP 1 Score: 188 bits (477), Expect = 1.020e-53
Identity = 96/165 (58.18%), Postives = 127/165 (76.97%), Query Frame = 1 
Query:  472 GMLEDEDCPDLDSYVEDNLMQGDEATVQAGGVSYLTAQEP-DDPILPTRSYDLSITYDKHHQTPRMFLFGYDESGQPLSAEEVFEDVMQDYARQTVTMEPHPHLSSH-HASVHPCKHASTMKIMLENLTKGGKEARVDQYLFIFLKFIQSVVPTIDYDYTMSVDA 960
            G   + + PDL ++ E+NL++ D+A + +   SYL A EP DD IL TR+YDLSITYDK++QTPR++LFGYDE+  PL  + +F+D+MQDYA+QTVTMEPHPH  +  HAS+HPC+HA+ MK ++ NLT      R DQYLF+FLKFIQSV+PTIDYD+T+ VDA
Sbjct:  151 GTKSEPNFPDLSTFEEENLVE-DKAALSS---SYLVATEPMDDAILRTRTYDLSITYDKYYQTPRVWLFGYDENNYPLDEDAIFQDIMQDYAKQTVTMEPHPHNPTLLHASIHPCQHAAVMKRIISNLTASASHLRSDQYLFVFLKFIQSVIPTIDYDHTVEVDA 311
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BLAST of mRNA_Ecto-sp13_S_contig1877.5909.1 vs. uniprot
Match: D0NKV4_PHYIT (Autophagocytosis associated protein, putative n=3 Tax=Phytophthora TaxID=4783 RepID=D0NKV4_PHYIT)

HSP 1 Score: 187 bits (474), Expect = 2.220e-53
Identity = 101/177 (57.06%), Postives = 126/177 (71.19%), Query Frame = 1 
Query:  478 LEDEDCPDLDSYVE-DNLMQGDEATVQAGGVSYLTAQEPDDP---ILPTRSYDLSITYDKHHQTPRMFLFGYDESGQPLSAEEVFEDVMQDYARQTVTMEPHPHLSSH-HASVHPCKHASTMKIMLENLT-----------KGGKEARVDQYLFIFLKFIQSVVPTIDYDYTMSVDA 960
            L D +  DL SY E DNL++ DEA +     SYL A EPDD    IL TR+YDLSITYDK++QTPR++LFGYDE   PLS +++FED+MQDYA +TVTMEPHPH S+  HAS+HPC+H + MK ++ NL            +   E R DQYLF+FLKFIQSV+PTIDYDYT+ V+A
Sbjct:  125 LSDPELRDLSSYEEEDNLVEDDEAALGPSTSSYLVASEPDDAEVAILRTRTYDLSITYDKYYQTPRVWLFGYDERNAPLSGDQLFEDIMQDYANRTVTMEPHPHRSALVHASIHPCQHGAVMKRIIANLKMRQPGETETEEQAANEIRSDQYLFLFLKFIQSVIPTIDYDYTIEVNA 301
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BLAST of mRNA_Ecto-sp13_S_contig1877.5909.1 vs. uniprot
Match: A0A251SAK6_HELAN (Putative autophagy 3 (APG3) n=7 Tax=Asteraceae TaxID=4210 RepID=A0A251SAK6_HELAN)

HSP 1 Score: 186 bits (472), Expect = 5.970e-53
Identity = 98/166 (59.04%), Postives = 125/166 (75.30%), Query Frame = 1 
Query:  472 GMLEDEDCPDLDSYVE-DNLMQGDEATVQAGGVSYLTAQEPDDP-ILPTRSYDLSITYDKHHQTPRMFLFGYDESGQPLSAEEVFEDVMQDYARQTVTMEPHPHLSSHHASVHPCKHASTMKIMLENLTKGGKEARVDQYLFIFLKFIQSVVPTIDYDYTMSVDAG 963
            G  E++D PD++   E DNL++ D AT+Q    +YL A EPDD  IL TR+YD+SITYDK++QTPR++L GYDES   L  E V EDV QD+AR+TVT+E HPHLS  HASVHPCKHA+ MK ++E L  GG E +VD+YLF+FLKF+ +V+PTI+YDYTM  D G
Sbjct:  148 GTEEEDDIPDMEEIDESDNLVEEDPATLQP---TYLVAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLDPELVLEDVSQDHARKTVTIEDHPHLSGKHASVHPCKHAAVMKKLIEPLIAGGLEPQVDKYLFLFLKFVATVIPTIEYDYTMDFDLG 310
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1877.5909.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLZ2_ECTSI2.320e-16096.34Autophagy-related protein3 n=1 Tax=Ectocarpus sili... [more]
A0A6U3QBA0_9STRA7.740e-6161.11Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835YXZ6_9STRA4.790e-6063.03Putative autophagocytosis associated protein n=1 T... [more]
A0A7S2GA68_9STRA1.050e-5666.42Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A421FX50_9STRA1.520e-5561.18Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
A0A3R7KIS0_9STRA2.290e-5561.18Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A7S3XUZ8_HETAK6.930e-5457.32Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F0W7Y3_9STRA1.020e-5358.18Autophagocytosis associated protein putative n=1 T... [more]
D0NKV4_PHYIT2.220e-5357.06Autophagocytosis associated protein, putative n=3 ... [more]
A0A251SAK6_HELAN5.970e-5359.04Putative autophagy 3 (APG3) n=7 Tax=Asteraceae Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1877contigEcto-sp13_S_contig1877:2441..8702 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score471.5
Seed ortholog evalue3.4e-130
Seed eggNOG ortholog2880.D7FLZ2
Preferred nameATG3
Model size1038
KEGG koko:K08343
KEGG Pathwayko04136,ko04138,ko04140,ko05167,map04136,map04138,map04140,map05167
Hectar predicted targeting categoryother localisation
GOsGO:0000045,GO:0000151,GO:0000153,GO:0000272,GO:0000422,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005776,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005980,GO:0006073,GO:0006091,GO:0006112,GO:0006464,GO:0006497,GO:0006501,GO:0006605,GO:0006612,GO:0006807,GO:0006810,GO:0006886,GO:0006914,GO:0006915,GO:0006950,GO:0006996,GO:0007005,GO:0007033,GO:0007154,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0008637,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009251,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0012501,GO:0015031,GO:0015833,GO:0015980,GO:0016043,GO:0016052,GO:0016236,GO:0016237,GO:0016567,GO:0016740,GO:0018410,GO:0019538,GO:0019776,GO:0019777,GO:0019787,GO:0019899,GO:0022411,GO:0022607,GO:0030100,GO:0031344,GO:0031667,GO:0031668,GO:0031669,GO:0032258,GO:0032446,GO:0032879,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0033554,GO:0034613,GO:0034645,GO:0034727,GO:0036211,GO:0042157,GO:0042158,GO:0042594,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043653,GO:0043687,GO:0044042,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0044275,GO:0044424,GO:0044444,GO:0044464,GO:0044804,GO:0044805,GO:0045184,GO:0045806,GO:0046907,GO:0048519,GO:0048523,GO:0050764,GO:0050765,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051051,GO:0051128,GO:0051129,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0055114,GO:0060491,GO:0060627,GO:0061723,GO:0061726,GO:0061912,GO:0061919,GO:0065007,GO:0070647,GO:0070727,GO:0070925,GO:0071496,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072657,GO:0072665,GO:0090150,GO:0120032,GO:0120035,GO:0140096,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902017,GO:1902115,GO:1902494,GO:1903008,GO:1905037,GO:1990234
Exons6
EggNOG free text desc.Atg8 ligase activity
EggNOG OGsKOG2981@1,KOG2981@2759
Cds size1038
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03029,ko04121,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1877.5909.1prot_Ecto-sp13_S_contig1877.5909.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1877 2441..8702 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462960.4867806-CDS-Ecto-sp13_S_contig1877:2440..26841681462960.4867806-CDS-Ecto-sp13_S_contig1877:2440..2684Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1877 2441..2684 +
1681462960.499853-CDS-Ecto-sp13_S_contig1877:3366..34311681462960.499853-CDS-Ecto-sp13_S_contig1877:3366..3431Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1877 3367..3431 +
1681462960.5099483-CDS-Ecto-sp13_S_contig1877:4676..49101681462960.5099483-CDS-Ecto-sp13_S_contig1877:4676..4910Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1877 4677..4910 +
1681462960.5188844-CDS-Ecto-sp13_S_contig1877:5806..59501681462960.5188844-CDS-Ecto-sp13_S_contig1877:5806..5950Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1877 5807..5950 +
1681462960.5280492-CDS-Ecto-sp13_S_contig1877:7721..78471681462960.5280492-CDS-Ecto-sp13_S_contig1877:7721..7847Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1877 7722..7847 +
1681462960.542564-CDS-Ecto-sp13_S_contig1877:8477..87021681462960.542564-CDS-Ecto-sp13_S_contig1877:8477..8702Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1877 8478..8702 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1877.5909.1

>prot_Ecto-sp13_S_contig1877.5909.1 ID=prot_Ecto-sp13_S_contig1877.5909.1|Name=mRNA_Ecto-sp13_S_contig1877.5909.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=346bp
MLRDGAGDDGSGSGDGGSAESAGGAGGGISDDAWVEPNVVADPSRGGRYG
PGGGDDDDEEELQLGGGARRLLGGEGGATDQDGVAAGLGAIQLVESHFTS
PAKAAASTADTATALQEAARETPTASGAIADFSGSGEEGKGSGGGSAGAG
GGIGAGGGMLEDEDCPDLDSYVEDNLMQGDEATVQAGGVSYLTAQEPDDP
ILPTRSYDLSITYDKHHQTPRMFLFGYDESGQPLSAEEVFEDVMQDYARQ
TVTMEPHPHLSSHHASVHPCKHASTMKIMLENLTKGGKEARVDQYLFIFL
KFIQSVVPTIDYDYTMSVDAGGGNNNDTSEPDLDDAFVDVAETSP*
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mRNA from alignment at Ecto-sp13_S_contig1877:2441..8702+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1877.5909.1 ID=mRNA_Ecto-sp13_S_contig1877.5909.1|Name=mRNA_Ecto-sp13_S_contig1877.5909.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6262bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1877:2441..8702+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTTAGAGACGGAGCGGGAGATGACGGCAGCGGCTCCGGCGACGGGGG
CTCAGCAGAATCAGCGGGAGGAGCAGGGGGGGGGATATCCGACGATGCGT
GGGTGGAGCCCAATGTGGTGGCCGATCCCTCAAGAGGAGGGAGGTATGGG
CCGGGCGGGGGCGACGATGACGATGAGGAGGAGTTGCAGCTAGGGGGTGG
GGCAAGGCGGTTGTTGGGGGGAGAGGGGGGAGCGACGGATCAAGGTATGG
CGAATGTTCTTGGGTGGGATTGATGTTGTGGGTCGTGGTGTGATATTTTT
TCATACGACATAGGATACGGCAGGTGTGGTACTGCTGTATGACATGGTAT
ACGGATTGGTGGCATGGCGTGGTACAGTATGACATGGCGAATGAAGTGGT
ACGGTATGGTATGGTATGGTATGGTATTGGAATGATAGGCACTGGATTGG
CAAGGGGCGGTATGACATGGTGTACGGATTGGCAGTATGGTGTGGTACGG
TGTGACATGGCTGATGAACTGGTATGGTATTAGATTGGCCTGGTTCGGTA
TGAATGGTGCATACGTTGGCAGCATGGTGTGGTTACATGAGGTTCTCGGT
TTTGCTCTTGAATTCGGTCCGTGCTTGCTTGTTGAGACGACGACATTGAG
AACCGAAGCGTACAACCGTGACGAAACTTGGGCCGATTCCGACGACAGGT
TGCGGTTCAAGTCGCAAACAACAACGAAAAAAAAAAAAAAAAAGTGAAGG
GATAATCATCACGTTTTCTCGTGGGAGAGATGCTTGAACGCCAGTCTCGT
TTTATCATGGTCTTGTTGCTTGGTGCAGGGGTGTTTCTTTTGCGAGAAAG
GGAGACAAGTCGAACACGCGCAGCAAACAGATAGCCTAAATATTGTTCAT
CTTTTTTTGTTCTCGTGTGGCGGCAGATGGAGTGGCGGCAGGTCTGGGTG
CCATCCAGCTGGTAGAGTCTCACTTCACGTCTCCCGCAAAGGTATGCGCT
GCTGTAACGATACGGTGCTATCGTCGTCGTCTACGTTTTTGTTGTTACAG
TAGTGGTTGCGTTGGTTAGGTCCGTTTCATACATGGCGATTTTGCTTCCA
AATTTCCAGATTCCAAATTCCGACTCTTCAGAGTTCAATTTTTTTTCGAA
CATTTGGAAGCAACTTATTCCAATTTTTTCGGTGCTATGTAGTGGTTTCC
AGATTCCCGAAATTCCTACACTTTTTTCCCTGAGCCTCATATCGAGGTCC
AGCGTCCAACGGATTTGGAAATTTGGACAATTGGAAGCAAAATAGCTGCT
TGTATAAAACGGTCCTTAGTGTTGTTGTTGATGGTGGCGGCGGTGTTGTT
GCTGTAGTAGTATTGTTTGTGCTGCTGTTGTGATTGTCGACGTTGTGCCC
GATGATGTGATCCGAGCAAGTTCGGTAGACTCGATGGCAGTATCTGGCAG
TGATCAAACGATCTCCAGGATAAGGAAACGCTTCCACGAAGTATGCCGAC
CAAAAGGCGAGGACAGATGATGAGCATGATTATTTTGCTGCATGACATGC
TATGATGTACAGTATACGCATATGCATATGTCTCATCCCATTTGTTCCGT
TCCCCCCCCCGAGTCACTGCTTTAATTTCAACACCCCCCCTTCGACTACC
TGTGGCATCATCTCGAGCTTGTAATCTTCCTGTGATGTGCGTATATTGTC
AACGGAATCTGGTGTGTTTTTTTCCAGCACACCCTTTGGGTGTGATGGTT
TTGGACGCGCCGCCGCCACCTGTGCGAGAACGAACCTCGTTTCTTGCGCT
GCGGCGAGAGCATCGGGCACTCACTTTTTCTTGTGGGTCATCCGCAGCCA
CTGCTGCAATTTTTTTTGCGCAACGGTTAGTCACCGACCGGGGCTCACAA
AGTTCTCGGATCGTGAAAAGAAACGAGGGTATCACACCTTCGTAGTGATG
GTTTTGTCTTCTACAGGCGATATGGTCACACGAACGTTGCGACTGTTTCA
GCAGGTGAAGATATAATCATCACGCCGATGTCGTGACCACGCATAGGATT
CTTGACTACTAGTTCTCAAGTGGGGGCGCGTGCTTCGTGTTGTTGGACCC
TAACCGAAGTCACACGGGAGAAAGCCTAAGAGGTATTTTTTTGTGGTTTG
GAACGGGGTACGTGTCGAGAAGGCATGCAACAACAATGAGCCGCGGAACC
CCCCCCCCCTTTGTCACATTCTGTGGTGCCCCCCAGGCGGCGGCATCAAC
AGCTGACACGGCAACAGCGTTACAGGAGGCCGCGAGAGAAACGCCAACAG
CATCAGGAGCAATAGCCGACTTTAGCGGTTCTGGGGAGGAGGGCAAGGGT
AGTGGTGGGGGGTCAGCGGGGGCGGGGGGAGGTATTGGTGCGGGCGGGGG
TATGTTGGAGGACGAGGACTGCCCGGATTTGGACAGCTACGTGGAGGACA
ACTTGATGCAGGGGGACGAGGTGGGCAAAAGCGACGAAGGGATGCTCATG
TAATCGCATGCCGTAGTCGTCGGACCCTTGACTTCGCATCTCTACAATGC
CGGGACGGAGCGATATGGGAGCGGGGGACGTAGCATTCGAGAAACTGTTG
GTGTTTTTGAAATTCGGCTGGCATTGGGCGGTAGTCCACTGCTGTTGTGC
TGACTTGTGGCGCGTGTGTTTTTTCGAAATGTTGCGCTGGTCCCACCCCT
TTGTCACCATGGGTTGAGTCGCGTGCTCACACACACCCCATTTCATACAT
TCCAGACAGTTGTTTGTTCGTTGTGCAACCCACAGACGCAAGTACTTGTA
AATACTCGGTCTGTTGTGTTGTTGTTGTTGTTGCTGTTGACATCCTCCTC
GTGTACGTGTTTCACTTCCTATATCCGCACCGCGGCGCCGACCTTGTTGT
TTGTTTGATGTTATTGTGCTTGTGCTTCTTGTTGTTGTTACTGCTGCTGC
TGCTGCTGCTGCTGGCGTTGGAATTTTTCATGTTGATGTTGATGCTGATG
CTGATGTTGCTGTTGCTGTTGTTGCTAGCGTCGTCGCACGCTTACAGCGT
TCCCGTTGTTGTTCCCTTTCCTGTACATATCCATGCAACACTACCGGATG
TCCTCTTGCTAATTGTTGTAGTCGTTCTCCACTGGTCCTGACTCACCTCA
CCTGGCCTAGGCGCGAGCAGGGGCATCGGCTGCCCACGCACGAGCTACGC
GCACACAGGCGTGTACGATTGATTACCAGTCGAGACCCACAAACAGGCGT
GAATAATTGACTGCCAGAGACGGAGAGAGTGGGCGGGCAAAGTCATGACC
AATATTGCGCGCGTACTGCTATGTGCGTTTTGCGTCCCACGTCTGTACTG
TGCTGTACCCCTTAAGGCTACCGTGCAGGCGGGAGGCGTGTCTTACCTCA
CGGCGCAGGAGCCGGATGACCCCATACTTCCCACGAGAAGCTACGACCTG
AGCATCACCTACGACAAGCACCACCAGACGCCAAGGATGTTTCTCTTCGG
CTACGACGAGGTACGGAGCACGCAGGACTTCATCTCTCTTTCTCTCTGTA
TTTCTCTCTGTATTTCTCTCTGTATTTCTCTCTGTATTTCTCTCTGTATT
TCTCTCTCTTCCCCCCCGCCCCTCCCTCCCCTATCTCTGCATGTGTGCAT
GTTGTCATTGTAATAGCATCGACCGCCCTAACCGGCTGACGAATGAAAAG
ACGCCAATCTCGGTGCGGCTGAAAGCTTGAAGTATGCTTCTAACGACCAT
GAATTGAGACCCCGTGAGCGGGTGTCATGGTGGAGGCCTAGCTGCTCTCC
GGATGAGAGGCAGAAAAAACGGCAGCAAGCGAAGAGAGGGGTGGGTAGGG
GACCTCAAGGAGAGGAACCCTTCTATGACCACGGGTTAGAGTTAACGGCA
CAAGTGCTGTGAGCGCTGATTTGAAGTCAAGACAAAATAAGAAAAACCAG
GAAAACTGCACACATGTCTTGTCTACCAAGGCTGCAACTTTGTTCTCGCG
TGTGTGTGTCAGCGACAATCAGCAAGTCGCTTGCTTCTTCAGCAGGAGTA
CATATGTAATGACAGCAGCAGCAGTGGTGGTGGCATAGGCAGAACGACTC
CCACGCATGCCTGAAGGACGACAGGAGACAGCTAACACCTAGCCTGTGCA
GAGCAGAGAAGGCACGGTGGAGGGTAGAGACAGAGCGAGAGAGACGGAGA
GAGAGAGACAGAGAGAGAGAGACAGAGAGAGAGAGGAAGAGAAAGAGAGA
GGGAGAGAGGCAGCAGGCGCTGTTCTCTACTACGGAACGTGGACAGCATG
AAGAGTGCAAATATCTTGTTTGCTGTAGAAGAGTCGGGACGAATTAGTCT
TATGCCTAGAGGGATCGGTTGTGTAAGGGCTGCGCCTAAGATGGTACTGC
TCTTTCCCGCTTACCGTGAGTTTGCGTGTCAGCACACAGGGGTGCGAACG
ATTTTCAAAGCGTGATTTCTCCACAGCCAGGGCGGTTTTGGAAATGTCTC
ATCGAGAGCTTTCGTTTAGAAGTATCGGTTGACGCTCGCGCCCTCCTGGT
TGTGGAGAAATTGTGCAATGGGAATCGATCGCATCCCTGTGCGCGCTGAC
TCGCAACCTTACGGTACCCTCGGCTTGACTCAGAGGCTGAACCAACCACC
GTAGGTGGCGTTCGCTATCACACCTCCTGAACCAGTTTTCAAAGCTCGAT
TTCTCAACGACGAATAGGATGTGCCAAACAAATGATGATTTGTCAGAAAG
CTCTCCAAGAGACGGTTCCAACGCAGCAGCCTGTTTTCGGTACTGCCACT
CTTTCTGCTGTGGATAACTCGAACCTTGTAAATCGATCCTGGGTGTGTGA
TGTGTTGCATCACCCGACGGTGGTTAGCTGTTATTTTCATCTGCGTAGAA
TTATTCGCTCCGTCGCCAAGTGTGTACTTTGAGGCGACGACTGCAGAATA
ATCAATCAAGGCTTGTAGGGATCGACACTCCGCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCTTCTTTT
TTTTTTTTTTTTTTCTATTTTTTTCTTTTTAAACACTCCCTCCTTTTTTG
CTTTGTTTGTTNNNNNNNNNNTCCTCTCGCGCCCGCGTGGTGTCTGTGTG
GCAGAGCATCCAAAAAAAAAAAATAATGCTTGGCGGGCACCACCCCCCCC
CCCCCCCCCCCCCCCCCCGCCCGCCCGCCCGCCCGCCCGCCCGCAACAAC
TTGTTGCTTTTCGTTTCATCTTTTGTCGAAGTCGGGGCAACCCCTGTCGG
CAGAGGAGGTGTTCGAGGACGTTATGCAGGACTACGCCAGACAGACGGTT
ACCATGGAGCCCCACCCCCACCTGTCCTCGCACCACGCCTCCGTTCACCC
CTGCAAAGTAAGGAAGGAAGGACAAGGAACAACGCTCGTTGGACAGCACA
GCAGATGCGGAGCTTTGTAAGGCAGACGCGTTCGTACACCTAAGACTTGA
AAAAAATGTGTGTGTGTAGACACAACATTCAGAGTAGAACGCAGAAAATA
GTGTGTAGACACTAACTTGAGTGTGTTTTGTTGAGTAGGCGCAGAAAAGG
GCGTGCGTTGGTACTACATGGCCGTCAATGCCGCCTTCGTTGGCCCTAGA
ACCGCCAGGGAATGGCCCGACGTAAGGCCGAGCCGACGATCGGACCAAGG
TGATGGGCAATGGTATCGAGCCACAACGAGCTCGAGAAGGGAAGACCGTG
CTTAGAGCCTGATACACGTACACACAGCTTGTATCTTGTGTCACAGAAAT
TCTGGACACGCCTCCCACCTTTGCTTTAGAAGTCCTCGCCGCGTATCATT
CGTGGTACGGAAACATGATACTTCCCGCTCCCGCCCCCCAACAGCACAAA
CAACGAAACAACAGCACGCGATACGTTTTCTGTTCCTCTCCCCGCACCCC
CCACCCACCCTCAAAAGAATCCAAAACAGCACGTAACCCCCCTCCCTCAC
CCTCGCAACCCACGCCCCCAAAACCACAACACAACAGCACGCCTCGACGA
TGAAGATCATGCTGGAGAACCTCACCAAGGGCGGTAAGGAGGCCCGCGTT
GACCAGTACCTCTTCATCTTCCTCAAGTTCATCCAGTCCGTCGTGCCCAC
CATCGACTACGACTACACGATGTCCGTGGACGCGGGGGGGGGTAACAACA
ACGACACCTCTGAGCCCGACCTGGACGACGCCTTCGTCGACGTAGCGGAA
ACCTCTCCTTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1877:2441..8702+

>mRNA_Ecto-sp13_S_contig1877.5909.1 ID=mRNA_Ecto-sp13_S_contig1877.5909.1|Name=mRNA_Ecto-sp13_S_contig1877.5909.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1038bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1877:2441..8702+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTTAGAGACGGAGCGGGAGATGACGGCAGCGGCTCCGGCGACGGGGG
CTCAGCAGAATCAGCGGGAGGAGCAGGGGGGGGGATATCCGACGATGCGT
GGGTGGAGCCCAATGTGGTGGCCGATCCCTCAAGAGGAGGGAGGTATGGG
CCGGGCGGGGGCGACGATGACGATGAGGAGGAGTTGCAGCTAGGGGGTGG
GGCAAGGCGGTTGTTGGGGGGAGAGGGGGGAGCGACGGATCAAGATGGAG
TGGCGGCAGGTCTGGGTGCCATCCAGCTGGTAGAGTCTCACTTCACGTCT
CCCGCAAAGGCGGCGGCATCAACAGCTGACACGGCAACAGCGTTACAGGA
GGCCGCGAGAGAAACGCCAACAGCATCAGGAGCAATAGCCGACTTTAGCG
GTTCTGGGGAGGAGGGCAAGGGTAGTGGTGGGGGGTCAGCGGGGGCGGGG
GGAGGTATTGGTGCGGGCGGGGGTATGTTGGAGGACGAGGACTGCCCGGA
TTTGGACAGCTACGTGGAGGACAACTTGATGCAGGGGGACGAGGCTACCG
TGCAGGCGGGAGGCGTGTCTTACCTCACGGCGCAGGAGCCGGATGACCCC
ATACTTCCCACGAGAAGCTACGACCTGAGCATCACCTACGACAAGCACCA
CCAGACGCCAAGGATGTTTCTCTTCGGCTACGACGAGTCGGGGCAACCCC
TGTCGGCAGAGGAGGTGTTCGAGGACGTTATGCAGGACTACGCCAGACAG
ACGGTTACCATGGAGCCCCACCCCCACCTGTCCTCGCACCACGCCTCCGT
TCACCCCTGCAAACACGCCTCGACGATGAAGATCATGCTGGAGAACCTCA
CCAAGGGCGGTAAGGAGGCCCGCGTTGACCAGTACCTCTTCATCTTCCTC
AAGTTCATCCAGTCCGTCGTGCCCACCATCGACTACGACTACACGATGTC
CGTGGACGCGGGGGGGGGTAACAACAACGACACCTCTGAGCCCGACCTGG
ACGACGCCTTCGTCGACGTAGCGGAAACCTCTCCTTGA
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