prot_Ecto-sp13_S_contig1873.5896.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1873.5896.1
Unique Nameprot_Ecto-sp13_S_contig1873.5896.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length69
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1873.5896.1 vs. uniprot
Match: A0A6H5KGX1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGX1_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 6.330e-41
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 
Query:    1 PLKGGAKIAPGRLYVKVDHRRDDELGPTLKSGTVGVKIVERVRVDPLGMAEADITNVVPCGSVQFRPV 68
            PLKGGAKIAPGRLYVKVDHRRDDELGPTLKSGTVGVKIVERVRVDPLGMAEADITNVVPCGSVQFRPV
Sbjct:  201 PLKGGAKIAPGRLYVKVDHRRDDELGPTLKSGTVGVKIVERVRVDPLGMAEADITNVVPCGSVQFRPV 268
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1873.5896.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KGX1_9PHAE6.330e-41100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1873contigEcto-sp13_S_contig1873:14412..15357 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1873.5896.1mRNA_Ecto-sp13_S_contig1873.5896.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1873 14412..15357 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1873.5896.1 ID=prot_Ecto-sp13_S_contig1873.5896.1|Name=mRNA_Ecto-sp13_S_contig1873.5896.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=69bp
PLKGGAKIAPGRLYVKVDHRRDDELGPTLKSGTVGVKIVERVRVDPLGMA
EADITNVVPCGSVQFRPV*
back to top