prot_Ecto-sp13_S_contig18714.5892.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18714.5892.1
Unique Nameprot_Ecto-sp13_S_contig18714.5892.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length208
Homology
BLAST of mRNA_Ecto-sp13_S_contig18714.5892.1 vs. uniprot
Match: D8LHQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ4_ECTSI)

HSP 1 Score: 360 bits (924), Expect = 1.180e-124
Identity = 193/207 (93.24%), Postives = 195/207 (94.20%), Query Frame = 0
Query:    1 SPAFVAPPSSSGSALTALRSTAPATTLTSRSRPAADGYSRAKGARQAWSAFGGVPDGGAATSAGEEERTRIAAEPKLQPEAASTVSGLATGAAVVALAALGGFPGLAAAEAPAWVGPTKLVLDPTLLYFEFAFVARIVLSWYPKLDLNSAPQNLVAWPTEPILRPTRAIIPPAFGVDISPIVWVMICSLVHEILLGQQGILNLMSNK 207
            S AFVAPPSSSGSALTALR+  PATTLTSRSRPAA GY R KGARQAWSA GGVPDGGA  S GEEERTR AAEPKLQP AASTVSGLATGAAVVALAALGGFPGLAAAEAPAWVGPTKLVLDPTLLYFEFAFVARIVLSWYPKLDLNSAPQNLVAWPTEPIL+PTRAIIPPAFGVDISPIVWVMICSLVHEILLGQQGILNLMSNK
Sbjct:   23 SSAFVAPPSSSGSALTALRTAPPATTLTSRSRPAAGGYGREKGARQAWSALGGVPDGGATASTGEEERTRSAAEPKLQPAAASTVSGLATGAAVVALAALGGFPGLAAAEAPAWVGPTKLVLDPTLLYFEFAFVARIVLSWYPKLDLNSAPQNLVAWPTEPILKPTRAIIPPAFGVDISPIVWVMICSLVHEILLGQQGILNLMSNK 229          
BLAST of mRNA_Ecto-sp13_S_contig18714.5892.1 vs. uniprot
Match: A0A6H5L5E9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E9_9PHAE)

HSP 1 Score: 345 bits (884), Expect = 1.100e-118
Identity = 189/216 (87.50%), Postives = 193/216 (89.35%), Query Frame = 0
Query:    2 PAFVAPPSSSGSALTALRSTAPATTLTSRSRPAADGYSRAKGARQAWSAFGGVPDGGAATSAGEEERTRIAAEPKLQP----------EAASTVSGLATGAAVVALAALGGFPGLAAAEAPAWVGPTKLVLDPTLLYFEFAFVARIVLSWYPKLDLNSAPQNLVAWPTEPILRPTRAIIPPAFGVDISPIVWVMICSLVHEILLGQQGILNLMSNK 207
            PAFVAPPSSSGSALTALR+ APATTLTSRSR AADGY  AKGAR AWSA GGV DGGAATSAGEEERT IAAEPKLQP          +  + V GLATGA VVALAALGGFPGLAAAEAPAWVGPTKLVLDPTLL+FEFAFVARIVLSWYPKLDLNSAPQNLVAWPTEPILRPTRAIIPPAFGVDISPIVWVMICSLVHEILLGQQGILNLMSNK
Sbjct:    6 PAFVAPPSSSGSALTALRTAAPATTLTSRSRRAADGYGMAKGARHAWSALGGVSDGGAATSAGEEERTGIAAEPKLQPAVGEEMLKWNDRLNIVGGLATGATVVALAALGGFPGLAAAEAPAWVGPTKLVLDPTLLFFEFAFVARIVLSWYPKLDLNSAPQNLVAWPTEPILRPTRAIIPPAFGVDISPIVWVMICSLVHEILLGQQGILNLMSNK 221          
BLAST of mRNA_Ecto-sp13_S_contig18714.5892.1 vs. uniprot
Match: A0A836CA21_9STRA (YGGT family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA21_9STRA)

HSP 1 Score: 162 bits (411), Expect = 2.890e-47
Identity = 74/99 (74.75%), Postives = 84/99 (84.85%), Query Frame = 0
Query:  109 AEAPAWVGPTKLVLDPTLLYFEFAFVARIVLSWYPKLDLNSAPQNLVAWPTEPILRPTRAIIPPAFGVDISPIVWVMICSLVHEILLGQQGILNLMSNK 207
            A+ P WVGPT+  LDP LLY EFAF+ RIVLSWYP+ DLN APQNLVAWPTEPIL+PTRA++PPAFGVDISPIVWVMI S V EIL GQQGI N++S +
Sbjct:   91 ADVPGWVGPTRAALDPFLLYMEFAFLCRIVLSWYPQTDLNKAPQNLVAWPTEPILKPTRAVVPPAFGVDISPIVWVMILSFVREILFGQQGIFNMLSQQ 189          
BLAST of mRNA_Ecto-sp13_S_contig18714.5892.1 vs. uniprot
Match: A0A7S3UWL9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWL9_HETAK)

HSP 1 Score: 140 bits (352), Expect = 1.760e-38
Identity = 66/102 (64.71%), Postives = 79/102 (77.45%), Query Frame = 0
Query:  104 PGLAAAEAPAWVGPTKLVLDPTLLYFEFAFVARIVLSWYPKLDLNSAPQNLVAWPTEPILRPTRAIIPPAFGVDISPIVWVMICSLVHEILLGQQGILNLMS 205
            P +A+AE PAWV PT  VL P L  F  A +ARIVLSWYP +DLN AP NLVAWPTEP+L  TR ++PPAFGVDISPIVW+M+ S V+E+ LG QGIL L++
Sbjct:   73 PTVASAEVPAWVEPTSTVLGPFLAVFSLAMLARIVLSWYPSIDLNEAPFNLVAWPTEPLLAFTRGVVPPAFGVDISPIVWLMVASFVNEVALGPQGILTLLA 174          
BLAST of mRNA_Ecto-sp13_S_contig18714.5892.1 vs. uniprot
Match: A0A7S2V560_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V560_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.560e-35
Identity = 61/104 (58.65%), Postives = 77/104 (74.04%), Query Frame = 0
Query:  104 PGLAAAEAPAWVGPTKLVLDPTLLYFEFAFVARIVLSWYPKLDLNSAPQNLVAWPTEPILRPTRAIIPPAFGVDISPIVWVMICSLVHEILLGQQGILNLMSNK 207
            P  A A AP WV PTKL+LDP L     A +AR+VLSWYP + L+ AP + +  PTEP+L+ TR ++PPAFGVD+SPIVW+MI S  HEILLGQQG+L ++ NK
Sbjct:   73 PESAFAAAPVWVAPTKLILDPLLNIVSLAMLARVVLSWYPSISLDKAPFSYLKAPTEPVLQVTREVVPPAFGVDVSPIVWIMISSFFHEILLGQQGLLTILQNK 176          
BLAST of mRNA_Ecto-sp13_S_contig18714.5892.1 vs. uniprot
Match: A0A7S2GHS6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GHS6_9STRA)

HSP 1 Score: 128 bits (321), Expect = 5.900e-34
Identity = 61/118 (51.69%), Postives = 81/118 (68.64%), Query Frame = 0
Query:   87 GLATGAAVVALAALGGFPGLAAAEAPAWVGPTKLVLDPTLLYFEFAFVARIVLSWYPKLDLNSAPQNLVAWPTEPILRPTRAIIPPAFGVDISPIVWVMICSLVHEILLGQQGILNLM 204
            GL T AA+ ++  L   P LA A   AW GPT+ + DP LL  +   + R+++SWYP+++LN  P N++ WPTEP LRPTR +IPPAFGVDISPIVW+ I S   EI  GQQG+ N++
Sbjct:   55 GLTTVAALSSVVLL--HPDLAIAYDNAWAGPTRAICDPLLLVGQTVMLFRVIISWYPEINLNKLPYNIITWPTEPFLRPTRKVIPPAFGVDISPIVWIAILSFFREIFFGQQGVFNML 170          
BLAST of mRNA_Ecto-sp13_S_contig18714.5892.1 vs. uniprot
Match: A0A7S2PCB6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PCB6_9STRA)

HSP 1 Score: 128 bits (321), Expect = 6.620e-34
Identity = 57/98 (58.16%), Postives = 73/98 (74.49%), Query Frame = 0
Query:  106 LAAAEAPAWVGPTKLVLDPTLLYFEFAFVARIVLSWYPKLDLNSAPQNLVAWPTEPILRPTRAIIPPAFGVDISPIVWVMICSLVHEILLGQQGILNL 203
            L  AE  AWV P K VLDP+L    FA + R+V+SWYP+ ++N  P N+V WPTEP+LR TR ++PPAFGVDISPIVW+ + + +HEI LGQQG+L L
Sbjct:   71 LTVAETEAWVEPLKNVLDPSLNLLSFAMLCRVVISWYPETNVNEVPYNIVVWPTEPLLRVTRGVVPPAFGVDISPIVWLGVFTFLHEIFLGQQGLLTL 168          
BLAST of mRNA_Ecto-sp13_S_contig18714.5892.1 vs. uniprot
Match: A0A7S1FZ37_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FZ37_9STRA)

HSP 1 Score: 125 bits (314), Expect = 6.460e-33
Identity = 57/95 (60.00%), Postives = 72/95 (75.79%), Query Frame = 0
Query:  109 AEAPAWVGPTKLVLDPTLLYFEFAFVARIVLSWYPKLDLNSAPQNLVAWPTEPILRPTRAIIPPAFGVDISPIVWVMICSLVHEILLGQQGILNL 203
            AE   WV P + VLDP L    FA + RIV+SWYP  +L++ P +L  WPTEP+LRPTRA++PPAFGVDISP+VW+ I + +HEILLGQQG+L L
Sbjct:   69 AETDPWVVPLQSVLDPLLNLLSFAMLCRIVISWYPNTNLSTLPYSLAVWPTEPLLRPTRAVVPPAFGVDISPMVWLGIFTFLHEILLGQQGLLTL 163          
BLAST of mRNA_Ecto-sp13_S_contig18714.5892.1 vs. uniprot
Match: A0A7S3W2L2_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3W2L2_9SPIT)

HSP 1 Score: 122 bits (306), Expect = 1.290e-31
Identity = 56/94 (59.57%), Postives = 67/94 (71.28%), Query Frame = 0
Query:  114 WVGPTKLVLDPTLLYFEFAFVARIVLSWYPKLDLNSAPQNLVAWPTEPILRPTRAIIPPAFGVDISPIVWVMICSLVHEILLGQQGILNLMSNK 207
            WVGPTKLVL P    F   F+ R +LSW+PK DLN+ P N+ AWPTEPIL+ TR +IPP  GVDI+PIVWV I S   EILLG QG+L ++  K
Sbjct:   80 WVGPTKLVLGPLFTIFTLLFLFRTILSWFPKYDLNAFPYNIAAWPTEPILKGTRKVIPPVAGVDITPIVWVAIISFFSEILLGPQGLLTIIQRK 173          
BLAST of mRNA_Ecto-sp13_S_contig18714.5892.1 vs. uniprot
Match: A0A7S0EIA8_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EIA8_9EUKA)

HSP 1 Score: 121 bits (304), Expect = 3.880e-31
Identity = 56/102 (54.90%), Postives = 72/102 (70.59%), Query Frame = 0
Query:  106 LAAAEAPAWVGPTKLVLDPTLLYFEFAFVARIVLSWYPKLDLNSAPQNLVAWPTEPILRPTRAIIPPAFGVDISPIVWVMICSLVHEILLGQQGILNLMSNK 207
            L A+   AW+G TK V+ P L  F   F+ R+VLSW+PK DLN  P N+ AWPTEPIL+PTR +IPP  GVDISPIVWV   S + EIL+G QG+L+++  +
Sbjct:   90 LVASSDTAWIGTTKAVVGPLLSIFTVLFLFRVVLSWFPKYDLNVLPWNIAAWPTEPILKPTRRLIPPVAGVDISPIVWVAFLSFLSEILIGPQGLLSILQKQ 191          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18714.5892.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHQ4_ECTSI1.180e-12493.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5E9_9PHAE1.100e-11887.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CA21_9STRA2.890e-4774.75YGGT family-domain-containing protein n=1 Tax=Trib... [more]
A0A7S3UWL9_HETAK1.760e-3864.71Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V560_9STRA1.560e-3558.65Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2GHS6_9STRA5.900e-3451.69Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2PCB6_9STRA6.620e-3458.16Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1FZ37_9STRA6.460e-3360.00Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S3W2L2_9SPIT1.290e-3159.57Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A7S0EIA8_9EUKA3.880e-3154.90Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003425CCB3/YggTPFAMPF02325YGGTcoord: 128..193
e-value: 8.8E-15
score: 54.9
IPR003425CCB3/YggTPANTHERPTHR33219FAMILY NOT NAMEDcoord: 121..207
NoneNo IPR availablePANTHERPTHR33219:SF11PROTEIN COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, CHLOROPLASTICcoord: 121..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18714contigEcto-sp13_S_contig18714:1355..2844 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18714.5892.1mRNA_Ecto-sp13_S_contig18714.5892.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18714 91..2844 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18714.5892.1 ID=prot_Ecto-sp13_S_contig18714.5892.1|Name=mRNA_Ecto-sp13_S_contig18714.5892.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=208bp
SPAFVAPPSSSGSALTALRSTAPATTLTSRSRPAADGYSRAKGARQAWSA
FGGVPDGGAATSAGEEERTRIAAEPKLQPEAASTVSGLATGAAVVALAAL
GGFPGLAAAEAPAWVGPTKLVLDPTLLYFEFAFVARIVLSWYPKLDLNSA
PQNLVAWPTEPILRPTRAIIPPAFGVDISPIVWVMICSLVHEILLGQQGI
LNLMSNK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003425CCB3/YggT