prot_Ecto-sp13_S_contig18706.5888.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig18706.5888.1
Unique Name	prot_Ecto-sp13_S_contig18706.5888.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	360

Homology

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BLAST of mRNA_Ecto-sp13_S_contig18706.5888.1 vs. uniprot
Match: A0A6H5KQA5_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQA5_9PHAE)

HSP 1 Score: 322 bits (825), Expect = 1.200e-96
Identity = 238/302 (78.81%), Postives = 244/302 (80.79%), Query Frame = 0

Query:   59 AIAASAGDIPHEGDPTSAPAVADAPKADAKSNDNGEVASTNTTSRSSGSTNSQDDRVRVLCRFRRTVERDGEEWGSPRGKWLVFGGGXXXXXXXXXXQEGGEGAPLDTVSVRMGGAWSTRGFDRVLKPGVDQAQVYSDVKRVAHGVSQGFNGTIFAYGQTGSGKTYTMGGATATLSAAPXXXXXXXXXXXXATGGGVTTPLGGHAGPTAPFPCHAGSAGALPLPAPSPSSPLAGTLEGTPTNSAPVPASLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGPGRGLHPIGTMPSSDAAGAVS 360
            A A+ AGDIPHEGDPTSAPA ADAPKA+AKSND+ EVA           T++QDDRVRVLCRFRRTVERDGEE GSPRGKWLVFGGGXXXXXXXXX  EGGEGAPLDTVSVRMGGAWSTRGFDRVLKPGVDQAQVYSDVKRVAHGVSQGFNGTIFAYGQTG+GKTYTMGGATATLSA  XXXXXXXX        GVTTP GG A      PCH GSAG LP       SP AG  E TPTN APVPAS PXXXXXXXXXXXXXXXXXXXXXX XXX   GPGR LHPIG MPSS AAGAVS
Sbjct:   76 ATASPAGDIPHEGDPTSAPAAADAPKAEAKSNDSVEVAXXXXXXXXXXXTSNQDDRVRVLCRFRRTVERDGEERGSPRGKWLVFGGGXXXXXXXXX-HEGGEGAPLDTVSVRMGGAWSTRGFDRVLKPGVDQAQVYSDVKRVAHGVSQGFNGTIFAYGQTGAGKTYTMGGATATLSAXXXXXXXXXX--------GVTTPSGGGAXXXXXXPCHPGSAGVLPXXXXXXXSPFAGAPEATPTNLAPVPAS-PXXXXXXXXXXXXXXXXXXXXXXLXXXLPDGPGRRLHPIGIMPSSHAAGAVS 367

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BLAST of mRNA_Ecto-sp13_S_contig18706.5888.1 vs. uniprot
Match: D8LL93_ECTSI (Kinesin motor domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL93_ECTSI)

HSP 1 Score: 174 bits (440), Expect = 1.040e-49
Identity = 121/189 (64.02%), Postives = 124/189 (65.61%), Query Frame = 0

Query:  171 MGGAWSTRGFDRVLKPGVDQAQVYSDVKRVAHGVSQGFNGTIFAYGQTGSGKTYTMGGATATLSAAPXXXXXXXXXXXXATGGGVTTPLGGHAGPTAPFPCHAGSAGALPLPAPSPSSPLAGTLEGTPTNSAPVPASLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGPGRGLHPIGTMPSSDAAGAV 359
            MGGAWS RGFDRVLKPGVDQAQVYSDVKRVAHGVSQGFNGTIFAYGQTGSGKTYTMGGATATLSA+P       XXXXX       TP GG+            SAG LPLPAPSPSSP AG  E  PTNSAPVPAS                  XXXXXX      GG   GLHPI T+PSS A G V
Sbjct:    1 MGGAWSRRGFDRVLKPGVDQAQVYSDVKRVAHGVSQGFNGTIFAYGQTGSGKTYTMGGATATLSASPAAATPATXXXXX-----XXTPSGGNXXXXXXXXXXXXSAGVLPLPAPSPSSPFAGMPEAAPTNSAPVPAS---PGYSSSVSPSTLLMPXXXXXXLPLQPPGGLRTGLHPIWTLPSSYALGVV 181

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig18706.5888.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig18706.5888.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KQA5_9PHAE	1.200e-96	78.81	Kinesin motor domain-containing protein n=1 Tax=Ec...	[more]
D8LL93_ECTSI	1.040e-49	64.02	Kinesin motor domain-containing protein (Fragment)...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001752	Kinesin motor domain	PFAM	PF00225	Kinesin	coord: 179..229 e-value: 8.8E-16 score: 57.7
IPR001752	Kinesin motor domain	PROSITE	PS50067	KINESIN_MOTOR_2	coord: 114..228 score: 14.805
IPR036961	Kinesin motor domain superfamily	GENE3D	3.40.850.10		coord: 166..248 e-value: 7.4E-20 score: 73.1
None	No IPR available	PANTHER	PTHR24115:SF592	CENTROMERE-ASSOCIATED PROTEIN E	coord: 179..233
IPR027640	Kinesin-like protein	PANTHER	PTHR24115	FAMILY NOT NAMED	coord: 179..233
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 112..235

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig18706	contig	Ecto-sp13_S_contig18706:541..2572 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig18706.5888.1	mRNA_Ecto-sp13_S_contig18706.5888.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig18706 541..2572 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig18706.5888.1 ID=prot_Ecto-sp13_S_contig18706.5888.1|Name=mRNA_Ecto-sp13_S_contig18706.5888.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=360bp
MVDVVASTAVAVTESSSSGSGSGGGSSNVSSPSPLLQQPPLVPPPGPSPS
TTPRTATAAIAASAGDIPHEGDPTSAPAVADAPKADAKSNDNGEVASTNT
TSRSSGSTNSQDDRVRVLCRFRRTVERDGEEWGSPRGKWLVFGGGGGDGG
GGGGGQEGGEGAPLDTVSVRMGGAWSTRGFDRVLKPGVDQAQVYSDVKRV
AHGVSQGFNGTIFAYGQTGSGKTYTMGGATATLSAAPAAAPAAATPAAAA
TGGGVTTPLGGHAGPTAPFPCHAGSAGALPLPAPSPSSPLAGTLEGTPTN
SAPVPASLPPPGSSSSVSPATLLMPPPPPPPLPPPPPGGPGRGLHPIGTM
PSSDAAGAVS

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001752	Kinesin_motor_dom
IPR036961	Kinesin_motor_dom_sf
IPR027640	Kinesin-like_fam
IPR027417	P-loop_NTPase