mRNA_Ecto-sp13_S_contig1870.5886.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1870.5886.1 vs. uniprot
Match: D8LBF5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBF5_ECTSI) HSP 1 Score: 1332 bits (3448), Expect = 0.000e+0 Identity = 783/855 (91.58%), Postives = 803/855 (93.92%), Query Frame = 1
Query: 124 MXXXKNMEERLEEEAVKMAELTESAKKKGESKFMSEEAKREAEERIRAEAEVVAQLERQAADMALQRENMQKKLAEREDIKAAEIEANTSALKTKRALVEARMRQEEEEIKTLSEAAKREVEAKMVAEAAAIAEMERQALQLSNKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKMQQEEAELQKLSDEAKQRVLEKMAAEAAAIAGMEREASKLAEERAILESQMADQRS-NATEGTSAVPTNTQDESKGQVGHVDLVEIQGIPLTTTSGRDEACAPEPTVGENAEETSDVTERAAPQSASPNMRKDQGEPGLVENFTSTSSAESPEALRYSETTDDGLARAGSNQVDDSHWNDHQAFPPADSIDIGVCDHCRTHQREISAAHLAAAAGHLTCLEAIQSTRRDMLAEVDSSGRSPLFYACANAHADAADLLIQESPQSCHTMDVNRDTPLHAAALAGSRLCCRLLLQHGRSEVEPLNEMEMTPAHLAANNDVLEVLSQHGANLNAKDADLRTPLFVACASDRLEKAEFLCELLEYADQDLGEVDKRGDTPMHAAAYNGSTACLLLLLQYGVEPDARNTKGLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETLNSVKQQGDTTVGAQEDSALVRPQSLMSLRRERSVRLEHWGDWISYEDQNEKSVFWYNHVEEKSQRDAPTGVREGSTSSLTKSSMRLKREGDWIEYTLPDRNVFYYNDKNNEFQWERPDDLSSTAAVAQEWADEDERLEGDTGIGGSSGDWMAFKDPLTGLVFWYNQVTDESQWEPPEEDREVGDRRADTESRAEGNSMVPEDNVREIDSVDDLFTPR 2685
M K+MEERLEEEAVKMAELTESAKKKGESKFMSEEAKREAEERIRAEAEVVAQLERQAADMALQRENMQK+LAEREDIKAAEIEANTSALKTKRALVEARMRQEEEEIKTLSEAAKREVEAKMVAEAAAIAEMERQALQLS XXXXXXXXXXX AKMQQEEAELQKLSDEAKQRVLEKMAAEAAAIAGMEREASKLAEERAILESQ+A+QRS NA EGTSAVPTNTQD+++GQ GHVD V+ QGIPLTTTSGRDEACAP PTV ENAEET+DVTERAAPQSASP+MRKDQGEPGLVENFT TSSAESPE LRY+ETTDDGLA AGS Q D SHWN HQA PPADSID GVC HCRTHQRE+S AHLAAAAGHLTCLEAIQST+R++LAEVDSSGRSPLFYACANAHADAADLLIQESPQSCH MDVNRDTPLHAAALAGSRLCCRLLLQHGRS VEPLNEMEMTPAHLAANNDVLEVLSQHGANLNAKDADLRTPLFVACASDRLEKAEFLCELLEYADQDLGEVDKRGDTPMHAAAYNGSTACLLLLLQYGVEPDARNTKGLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETLNSVKQQGDTT G QEDSALVRPQSLMSLRRERSVRLEHWGDWISYEDQNEKSVFWYNHVEEKSQRDAPTGVREGS SSLTK+SMRLKREGDWIEYTLPD NVFYYNDKNNEFQWERPDDLSSTAAV+QEWADEDERLEGDTGIGGS+GDWMAFKDP TGL+FWYNQVTDESQWEPPEEDREVGDRRADTESRA+GNSMVPEDNVREIDSVDDLFTPR
Sbjct: 1 MKKRKDMEERLEEEAVKMAELTESAKKKGESKFMSEEAKREAEERIRAEAEVVAQLERQAADMALQRENMQKQLAEREDIKAAEIEANTSALKTKRALVEARMRQEEEEIKTLSEAAKREVEAKMVAEAAAIAEMERQALQLSXXXXXXXXXXXXXXXLEDTLVQEAQLIARKREAIEAKMQQEEAELQKLSDEAKQRVLEKMAAEAAAIAGMEREASKLAEERAILESQIAEQRSSNAVEGTSAVPTNTQDDNEGQFGHVDPVDTQGIPLTTTSGRDEACAPVPTVSENAEETTDVTERAAPQSASPDMRKDQGEPGLVENFTLTSSAESPEVLRYTETTDDGLALAGSVQEDGSHWNGHQAVPPADSIDSGVCAHCRTHQREMSTAHLAAAAGHLTCLEAIQSTQREILAEVDSSGRSPLFYACANAHADAADLLIQESPQSCHAMDVNRDTPLHAAALAGSRLCCRLLLQHGRSAVEPLNEMEMTPAHLAANNDVLEVLSQHGANLNAKDADLRTPLFVACASDRLEKAEFLCELLEYADQDLGEVDKRGDTPMHAAAYNGSTACLLLLLQYGVEPDARNTKGLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETLNSVKQQGDTTAGVQEDSALVRPQSLMSLRRERSVRLEHWGDWISYEDQNEKSVFWYNHVEEKSQRDAPTGVREGSASSLTKASMRLKREGDWIEYTLPDGNVFYYNDKNNEFQWERPDDLSSTAAVSQEWADEDERLEGDTGIGGSTGDWMAFKDPSTGLLFWYNQVTDESQWEPPEEDREVGDRRADTESRADGNSMVPEDNVREIDSVDDLFTPR 855
BLAST of mRNA_Ecto-sp13_S_contig1870.5886.1 vs. uniprot
Match: A0A835Z169_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z169_9STRA) HSP 1 Score: 290 bits (742), Expect = 1.140e-78 Identity = 205/575 (35.65%), Postives = 266/575 (46.26%), Query Frame = 1
Query: 1129 YSETTDDGLARAGSNQVDDSHWNDHQAFPPADSIDIGVCDHCRTHQRE-----ISAAHLAAAAGHLTCLEAI-QSTRRDMLAEVDSSGRSPLFYACANAHADAADLLIQESPQSCHTMDVNRDTPLHAAALAGSRLCCRLLLQHGRSEVEPLNEMEMTPAHLAANNDVLEVLSQHGANLNAKDADLRTPLFVACASDRLEKAEFLCELLEYADQDLGEVDKRGDTPMHAAAYNGSTACLLLLLQYGVEPDARNTKGLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETLNSVKQQG----------------------DTTVGAQED-----------SALVRPQSLMSLRRERSVRLEHWGDWISYEDQNEKSVFWYNHVEEKSQRDAPTGVREGSTS----------SLTKSSMRLKREGDWIEYTLPDRNVFYYNDKNNEFQWERPDDLSSTAAVAQEWADEDERLE-GDTGIGGSSGDWMAFKDPLTGLVFWYNQVTDESQWEPPEEDREVGDRRADTESRAEGNSMVPEDNVREIDSVDDLFTPRWHSPGG 2703
Y T G AG + S D +A+ D+ GVC C + + AH AAAAGH CL A+ + D L+ +D++ R PLFYACA+ HA A LLI + D + G R C LL ++ LN M PAHLAA+ + LE L A+DR+E A+FLCELL+ QDL + D+RGDTP+HAAA NG+TACL+LLLQYG PD RN +GLR +E L + + QG D A D S R SL SLRRERSVRL+ +GDWI+YEDQ + +FWYN + ++ + P V T ++ +SMRLKREGDW++YT+ + VFYYND+ N FQWERP DL +T A L+ G T G G W +KDP +GL+FW++Q T SQWEPP E E+ D T A+ P+D+VRE+ VDDLF GG
Sbjct: 559 YDVFTKAGHVDAGPSDAYQSADRDDEAWLRVDAAQ-GVCGECARGGGDDDDGALPLAHRAAAAGHAACLTALYEGGAADALSALDAAARPPLFYACAHGHARCAQLLIAAAAGCVELADTS----------GGDRAECTRLLIDAGADATALNTRGMAPAHLAASRETLEALXXXXXXXXXXXXXXXXXXXXXXATDRVEVADFLCELLDCEGQDLAQPDQRGDTPLHAAACNGATACLMLLLQYGCVPDIRNKRGLRPIDLASRRHHGAAEKVLLEYQLHHAVSDSYFDSVLFLATLEGHRKAKEALRAAQGQGPEEDDNYEIVRAASDGRSSRGSDVRDAADNDDDYSPRLSADASGGRRRGSLWSLRRERSVRLQQYGDWIAYEDQESRRLFWYNLATKATEWEQPPEVGALVTKQKESMGMLGGAVMAASMRLKREGDWLQYTVANGKVFYYNDRTNNFQWERPADLPATPAFRS--------LDTGGTPEGTKRGGWAPYKDPTSGLIFWHHQGTGASQWEPPCE--ELADALTGT---ADALGFGPDDSVREVQDVDDLFESSLQDSGG 1109
BLAST of mRNA_Ecto-sp13_S_contig1870.5886.1 vs. uniprot
Match: A0A7S2FAD8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FAD8_9STRA) HSP 1 Score: 249 bits (636), Expect = 1.590e-68 Identity = 162/428 (37.85%), Postives = 209/428 (48.83%), Query Frame = 1
Query: 1459 TMDVNRDTPLHAAALAGSRLCCRLLLQHGRSEVEPLNEMEMTPAHLAANNDVLEVLSQHG---ANLNAKDADLRTPLFVACASDRLEKAEFLCELLEYADQDLGEVDKRGDTPMHAAAYNGSTACLLLLLQYGVEPDARNTKGLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETLNSVKQQGDTTVGAQEDSA----LVRPQSLMSLRRERSVRLEHWGDWISYEDQNEKSVFWYNHVEEKSQRDAPTGVR----------EGSTSSLTKSSMRLKREGDWIEYTLPDRNVFYYNDKNNEFQWERPDDLSSTAAVAQ----EWADEDERLEGDTGIGGSSGDWMAFKDPLTGLVFWYNQVTDESQWEPPEEDREVGDRRADTES--RAEGNSMVPEDNVREIDSVDDL 2673
T D N DTPLHAA G+ CCRLLL + E N + M PAHL + LE+L HG LN +DA RTPLFVACA DR + EFLCE+++ ++D+ VD+RGDTP+HAAA NG+ L LLLQ G PD RN KG R LN+ + + A + R SL S+RR +S+RL+ +G WI+YED SVFWYNH + SQ D P V+ +G +L K+SMRLKR DWIEY FYYN+ + EFQWERP DL+ + + E + DT + + +W +KDP TG+ FWYN T +QWE PE E A + EG E V +++ VDDL
Sbjct: 115 TADENGDTPLHAAVSTGALGCCRLLLASSHCDPERANALGMRPAHLVKDRGTLELLCSHGQGGVELNCEDAQQRTPLFVACAIDRSDVVEFLCEIMDN-EEDMNHVDRRGDTPLHAAACNGAVKSLTLLLQLGTNPDVRNKKGYRPIDLAARRGHVACENLLSEYHMHHSAGSYFDSVLFLATLQGHKACKEALLNTDEDSQYEIIKRSNPEATEDEIRRMGSLWSMRRSQSMRLQQYGSWIAYEDPKVGSVFWYNHRTQSSQWDKPAEVQVAQDAKQMEAKGEWENLKKTSMRLKRVSDWIEYHGQGGKTFYYNETSREFQWERPVDLAPPEPKEDPEPVQTENGGEMWQSDTPVAVAP-EWFPYKDPNTGMRFWYNHTTGATQWETPEGVNEADHDEAHDQDWDLQEGE----EQGVYDVNHVDDL 536
BLAST of mRNA_Ecto-sp13_S_contig1870.5886.1 vs. uniprot
Match: A0A8J2X141_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X141_9STRA) HSP 1 Score: 159 bits (402), Expect = 8.390e-36 Identity = 132/452 (29.20%), Postives = 185/452 (40.93%), Query Frame = 1
Query: 1279 AAHLAAAAGHLTCLEAIQSTRRDMLAEVDSSGRSPLFYACANAHADAA-DLLIQESPQSCHTMDVNRDTPLHAAALAGSRLCCRLLLQ--HGRSEVEPLNEMEMTPAHLAANNDVLEVLSQHGANLNAKDADLRTPLFVACASDRLEKAEFLCELLEYAD--QDLGEVDKRGDTPMHAAAYNGSTACLL------LLLQYGVEPDARNTKG-LRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETLNSVKQQG-DTTVGAQEDSALVRPQSLMSLRRERSVRLEHWGDWISYEDQNEKSVFWYNHVEEKSQRDAPTGV-----REGSTSS----LTKSSMRLKRE-GDWIEYTLPDRNVFYYNDKNNEFQWERPDDLSSTAAVAQEWADEDERLEGDTGIGGSSGDWMAFKDPLTGLVFWYNQVTDESQWEPPE 2565
A H AAA G + L+ D SGR+ LFYACA+ D LL + +P D N DTPLHAA AG+ C R +L G N M P H+AA + LE L +HGA+L+ DA RTPLFVACA++R A + E+LE + DL + R LLL+ G D RN +G + L + G D + D L R S SLR+ +R+ +GDWI+Y D ++VFWYNH + Q D P V EG ++ L + ++RL+ DWI Y + FYY+ + +F++E P D ++ A DW + D +G+ +WY++ ES W+PPE
Sbjct: 921 AGHRAAAKGKVAFFRTCDDR---CLSRADESGRTALFYACAHDRPDCVLQLLKRGAPVQA---DANGDTPLHAAVSAGAARCARHVLAAVRGGFIARAPNARGMVPGHVAATVECLEALLEHGADLSVADAAGRTPLFVACATNRPACASLIMEVLEMHEIGHDLADGSCRATXXXXXXXXXXXXXXXXXXXXXRLLLEAGTPADTRNARGWTAEELARWGRHGEAAKLLAEFRLHGTVAFDSVLFLATVAGHRLCKRLVADALAERRGPGYDVLMRPGVDGGLSRSASRWSLRQSDGLRVSVYGDWIAYNDAELRAVFWYNHASREGQWDRPDAVVAAMDGEGDPAAAWARLREGTVRLRHVVNDWISYEIAGEEPFYYDVASGDFRFEAPSDATAAA-----------------------NDWCRYVDDASGMPYWYSEARGESTWDPPE 1343
BLAST of mRNA_Ecto-sp13_S_contig1870.5886.1 vs. uniprot
Match: A0A6A3WZI2_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3WZI2_9STRA) HSP 1 Score: 144 bits (364), Expect = 2.250e-31 Identity = 119/457 (26.04%), Postives = 187/457 (40.92%), Query Frame = 1
Query: 1240 VCDHCRTHQREISAAHLAAAAGHLTCLEAIQSTRRDMLAE------VDSSGRSPLFYACANAHADAADLLIQESPQSCHTMDVNRDTPLHAAALAGSRLCCRLLLQHGRSEVEPLNEMEMTPAHLAANNDVLEVLSQHGANLNAKDADLRTPLFVACASDRLEKAEFLCELLEYADQDLGEV-DKRGDTPMHAAAYNGSTACLLLLLQYGVEPDARNTKGLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETLNSVKQQGDTTVGAQEDSALVRPQSLMSLRRERSVRLEHWG---DWISYEDQNEKSVFWYNHVEEKSQRDAPTGVREGSTSSLTKSSMRLKREGDWIEYTLPDRNVFYYNDKNNEFQWERPDDLSSTAAVAQEWADEDERLEGDTGIGGSSGDWMAFKDPLTGLVFWYNQVTDESQWEPPEEDREV 2580
VC C + R++ H AA GH+TCLE + ++ + +D R+PLFYACA + LL + +T D DTP+H G C +LLL G ++ N P+HLAA + LE L G +L D R+PLFVACA +R+ EFLC + + E+ D+RGD +HAAA NGSTA L +LL+YG +P N KG+ + Q + + A ++ + P + + G DW+ D + F+YN++ K Q + PTG +S++ ++ +Y +D N E+ W + + ++E +W A +DP++ +++ N T +SQWE P+ RE+
Sbjct: 173 VCSQC-SRSRDMPPMHCAAYTGHVTCLELLHHAETEVTDDKKTTTWLDKKQRTPLFYACAANQLECCALLARVRRVWLNTADRQMDTPVHVCCFFGRHECLQLLLDAG-ADPHGRNAKGFKPSHLAATPECLEALLAFGDDLLQGDKLGRSPLFVACARNRVACVEFLCAWNNQSRSWMLELEDQRGDRAIHAAACNGSTASLAVLLRYGADPLTNNAKGMSPKDLAAANK-------------------------------------HPECEELLVQAEKELAASAGTSWLAPANAADSGDNNYIDANADGTNSDWVQCWDNDSGQAFYYNNLTGKCQWEVPTGFD---------ASLQPQQPAASQQYDTYSEATSEVDDGNEEYVWVKKKKQTVCVVTSKET------------------EWTAVQDPVSRAIYYKNTRTGQSQWEEPDAVREL 563
BLAST of mRNA_Ecto-sp13_S_contig1870.5886.1 vs. uniprot
Match: G4ZQF5_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZQF5_PHYSP) HSP 1 Score: 141 bits (355), Expect = 2.740e-30 Identity = 123/461 (26.68%), Postives = 182/461 (39.48%), Query Frame = 1
Query: 1240 VCDHCRTHQREISAAHLAAAAGHLTCLEAIQSTRRDMLAE-------------VDSSGRSPLFYACANAHADAADLLIQESPQSCHTMDVNRDTPLHAAALAGSRLCCRLLLQHGRSEVEPLNEMEMTPAHLAANNDVLEVLSQHGANLNAKDADLRTPLFVACASDRLEKAEFLCELLEYADQDLGEV-DKRGDTPMHAAAYNGSTACLLLLLQYGVEPDARNTKGLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETLNSVKQQGDTTVGAQEDSALVRPQSLMSLRRERSVRLEHWGDWISYEDQNEKSVFWYNHVEEKSQRDAPTGVREGSTSSLTKSSMRLKREGDWIEYTLPDRNVFYYNDKNNEFQWERPDDLSSTAAVAQEWADEDERLEGDTGIGGSSGDWMAFKDPLTGLVFWYNQVTDESQWEPPEEDREV 2580
VC C + RE+ H AA GH+TCLE + + D+ AE +D R+PLFY CA + LL + +T D DTP+H G C +LLL G ++ N P+HLAA + LE L G +L D R+PLFVACA +R+ EFLC + + E+ D+RGD +HAAA NGSTA L +LL+YG +P N KG+ + VK +G TT DW+ D + F+YN++ K Q + P G +SS ++ +Y + +D N E+ W + + ++E +W A +DP++ +++ N T +SQWE P+ RE+
Sbjct: 182 VCAQC-SKSREMPPMHCAAYTGHVTCLELLLQ-KADVEAESADDQGKKKKSTWLDKKQRTPLFYVCAANRLECCALLARVRRLWLNTADRQMDTPVHVCCFFGWHQCLQLLLDAG-ADPHGRNAKGFKPSHLAATPECLEALLAFGDDLLQGDKLGRSPLFVACARNRVACVEFLCAWNNQSRSWMLELEDQRGDRAIHAAACNGSTASLAVLLRYGADPLTNNAKGMSPKDLAAANKHPECEELLAQAERELAASAGTSWLAPANAADSGD----NNYSDVKAEGATT------------------------------DWVQCLDNDSGQAFYYNNLTGKCQWEVPPGFDASLQPQQAQSSATNTQQ----QYETYSESAGEVDDGNEEYVWVKKKKQTVCVVTSKET------------------EWTAVQDPVSRAIYYKNTRTGQSQWEEPDAVREL 583
BLAST of mRNA_Ecto-sp13_S_contig1870.5886.1 vs. uniprot
Match: D0P393_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0P393_PHYIT) HSP 1 Score: 140 bits (353), Expect = 4.580e-30 Identity = 123/456 (26.97%), Postives = 183/456 (40.13%), Query Frame = 1
Query: 1240 VCDHCRTHQREISAAHLAAAAGHLTCLEAI--------QSTRRDMLAEVDSSGRSPLFYACANAHADAADLLIQESPQSCHTMDVNRDTPLHAAALAGSRLCCRLLLQHGRSEVEPLNEMEMTPAHLAANNDVLEVLSQHGANLNAKDADLRTPLFVACASDRLEKAEFLCELLEYADQDLGEV-DKRGDTPMHAAAYNGSTACLLLLLQYGVEPDARNTKGLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETLNSVKQQGDTTVGAQEDSALVRPQSLMSLRRERSVRLEHWGDWISYEDQNEKSVFWYNHVEEKSQRDAPTGVREGSTSSLTKSSMRLKREGDWIEYTLPDRNVFYYNDKNNEFQWERPDDLSSTAAVAQEWADEDERLEGDTGIGGSSGDWMAFKDPLTGLVFWYNQVTDESQWEPPEEDREV 2580
VC C + RE+ H AA GH+TCLE + ++ + +D R+PLFYACA + LL +E ++ D DTP+H G C +LLL G ++ N P+HLAA + LE L G +L D R+PLFVACA DR+ +FLC + + E+ D+RGD +HAAA NGST + +LL+YG +P NT+G+ ++ Q + + A S+ + P + + GDWI D F+YN++ K Q +APTG S + + T D N E+ W + T V + G +W A +DP + +++ N T +SQWE P+ RE+
Sbjct: 166 VCLQC-SKSREMPPMHCAAYNGHVTCLELLLRKADAETEAQGKKKTNWLDKKQRTPLFYACAANRLECGALLARERRVWLNSPDRQMDTPVHVCCFFGWHQCLQLLLDAG-ADPHGRNAKGFKPSHLAATPECLEALLAFGDDLLQGDKLGRSPLFVACARDRVSCVKFLCAWNNQSRSWMLELEDERGDRAIHAAACNGSTGSVAVLLRYGADPLMSNTRGMSPKDLAVANK-------------------------------------HPDCEALLIQAENELAASAGSSWLAPANAVDSEGNNGESKGE-GDWIQCWDNVSGQAFYYNNLTGKCQWEAPTGFEALEQPQQGTSGQHYDQYSEASGET---------EDGNEEYVWVKK--KKQTVCV----------------VSGRETEWTAVQDPASRAIYYKNIRTGQSQWEEPDAVREL 554
BLAST of mRNA_Ecto-sp13_S_contig1870.5886.1 vs. uniprot
Match: A0A225VSR0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VSR0_9STRA) HSP 1 Score: 140 bits (352), Expect = 6.100e-30 Identity = 119/463 (25.70%), Postives = 187/463 (40.39%), Query Frame = 1
Query: 1240 VCDHCRTHQREISAAHLAAAAGHLTCLEAI------------QSTRRDMLAEVDSSGRSPLFYACANAHADAADLLIQESPQSCHTMDVNRDTPLHAAALAGSRLCCRLLLQHGRSEVEPLNEMEMTPAHLAANNDVLEVLSQHGANLNAKDADLRTPLFVACASDRLEKAEFLCELLEYADQDLGEV-DKRGDTPMHAAAYNGSTACLLLLLQYGVEPDARNTKGLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETLNSVKQQGDTTVGAQEDSALVRPQSLMSLRRERSVRLEHW--GDWISYEDQNEKSVFWYNHVEEKSQRDAPTGVREGSTSSLTKSSMRLKREGD-WIEYTLPDRNVFYYNDKNNEFQWERPDDLSSTAAVAQEWADEDERLEGDTGIGGSSGDWMAFKDPLTGLVFWYNQVTDESQWEPPEEDREV 2580
VC C R++ H AA GH+TCLE + + ++ + +D R+PLFYACA H + +L + +T D DTP+H G C +LLL G ++ N P+HLAA + LE L G +L D R+PLFVACA +R+ EFLC + + E+ D+RGD +HAAA NGST L +LL+YG +P N KG+ ++ Q + + A ++ + P + + + DW+ D + F+YN++ K Q + P G + SS + D + E + D D N E+ W + + ++E +W A +DP++ +++ N T +SQWE P+ RE+
Sbjct: 174 VCVQCNK-SRDMPPMHCAAYNGHITCLELLLQKADAEVELPEEQDKKKKTSYLDKKQRTPLFYACAANHLECCAVLARVRRVWLNTADRQMDTPVHVCCFFGWHQCLQLLLDAG-ADPHGRNAKGFKPSHLAATPECLEALLAFGDDLLQGDKLGRSPLFVACARNRVACVEFLCAWNNQSRSWMLELEDQRGDRAIHAAACNGSTDSLAVLLRYGADPLTNNAKGMSPKDLAVTNN-------------------------------------HPDCEALLAQAEQELAASAGTSWLAPANAVDENNNYGDTRTNGCSSDWVQCWDNDSGEAFYYNNLTGKCQWEVPPGFEDSFQPQQPHSSANNSQHNDTYSEASETD-------DGNEEYVWVKKKKQTVCVVTSRET------------------EWTAVQDPVSRAIYYKNTRTGQSQWEEPDAVREL 572
BLAST of mRNA_Ecto-sp13_S_contig1870.5886.1 vs. uniprot
Match: A0A833SKC9_PHYIN (Putative WW domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SKC9_PHYIN) HSP 1 Score: 134 bits (338), Expect = 1.040e-29 Identity = 118/441 (26.76%), Postives = 176/441 (39.91%), Query Frame = 1
Query: 1285 HLAAAAGHLTCLEAI--------QSTRRDMLAEVDSSGRSPLFYACANAHADAADLLIQESPQSCHTMDVNRDTPLHAAALAGSRLCCRLLLQHGRSEVEPLNEMEMTPAHLAANNDVLEVLSQHGANLNAKDADLRTPLFVACASDRLEKAEFLCELLEYADQDLGEV-DKRGDTPMHAAAYNGSTACLLLLLQYGVEPDARNTKGLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETLNSVKQQGDTTVGAQEDSALVRPQSLMSLRRERSVRLEHWGDWISYEDQNEKSVFWYNHVEEKSQRDAPTGVREGSTSSLTKSSMRLKREGDWIEYTLPDRNVFYYNDKNNEFQWERPDDLSSTAAVAQEWADEDERLEGDTGIGGSSGDWMAFKDPLTGLVFWYNQVTDESQWEPPEEDREV 2580
H AA GH+TCLE + ++ + +D R+PLFYACA + LL +E ++ D DTP+H G C +LLL G ++ N P+HLAA + LE L G +L D R+PLFVACA DR+ +FLC + + E+ D+RGD +HAAA NGST + +LL+YG +P NT+G+ ++ Q + + A S+ + P + + GDWI D F+YN++ K Q +APTG S + + T D N E+ W + T V + G +W A +DP + +++ N T +SQWE P+ RE+
Sbjct: 5 HCAAYNGHVTCLELLLRKADAETEAQGKKKTNWLDKKQRTPLFYACAANRLECGALLARERRVWLNSPDRQMDTPVHVCCFFGWHQCLQLLLDAG-ADPHGRNAKGFKPSHLAATPECLEALLAFGDDLLQGDKLGRSPLFVACARDRVSCVKFLCAWNNQSRSWMLELEDERGDRAIHAAACNGSTGSVAVLLRYGADPLMSNTRGMSPKDLAVANK-------------------------------------HPDCEALLIQAENELAASAGSSWLAPANAVDSEGNNGESKGE-GDWIQCWDNVSGQAFYYNNLTGKCQWEAPTGFEALEQPQQGTSGQHYDQYSEASGET---------EDGNEEYVWVKK--KKQTVCV----------------VTGRETEWTAVQDPASRAIYYKNIRTGQSQWEEPDAVREL 379
BLAST of mRNA_Ecto-sp13_S_contig1870.5886.1 vs. uniprot
Match: H3GYI9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GYI9_PHYRM) HSP 1 Score: 138 bits (347), Expect = 2.450e-29 Identity = 122/463 (26.35%), Postives = 188/463 (40.60%), Query Frame = 1
Query: 1240 VCDHCRTHQREISAAHLAAAAGHLTCLEAI------------QSTRRDMLAEVDSSGRSPLFYACANAHADAADLLIQESPQSCHTMDVNRDTPLHAAALAGSRLCCRLLLQHGRSEVEPLNEMEMTPAHLAANNDVLEVLSQHGANLNAKDADLRTPLFVACASDRLEKAEFLCELLEYADQDLGEV-DKRGDTPMHAAAYNGSTACLLLLLQYGVEPDARNTKGLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETLNSVKQQGDTTVGAQEDSALVRPQSLMSLRRERSVRLEHWG---DWISYEDQNEKSVFWYNHVEEKSQRDAPTGVREGSTSSLTKSSMRLKREGDWIEYTLPDRNVFYYNDKNNEFQWERPDDLSSTAAVAQEWADEDERLEGDTGIGGSSGDWMAFKDPLTGLVFWYNQVTDESQWEPPEEDREV 2580
VC C + R++ H A+ +GH+TCLE + +++ +D R+PLFYACA + LL + +T D DTP+H G C +LLL G ++ N P+HLAA + LE L G +L D R+PLFVACA +R+ EFLC + + E+ D+RGD +HAAA NGST L +LL+YG +P N KG+ ++ Q + + A ++ + P + E G DW+ D + F+YN++ K Q + P G + S SS ++ G + E N +D N E+ W + T V + G +W A +D ++ +++ N T +SQWE P+ RE+
Sbjct: 170 VCSQC-SKSRDMPPMHCASYSGHVTCLELLLRKADAESELTEDQSKKKKTTWLDKKQRTPLFYACAADRLECCALLARVRRVWLNTPDRQMDTPVHVCCFFGWNKCLQLLLDAG-ADPHGRNAKGFKPSHLAATPECLEALLAFGDDLLQGDKLGRSPLFVACARNRVACVEFLCAWNNQSRSWMLELEDQRGDRAIHAAACNGSTDSLAVLLRYGSDPLTNNAKGMSPKDLAIANKHPGC-------------------------------------EALLVQAEKELAASAGTSWLAPANAADTNDNNYGDSETEGSSSDWVECWDNDSGQAFYYNNLTGKCQWEVPPGF-DASLQQAQSSSNNSQQYGGYSE------NAGDTDDGNEEYVWVKK--KKQTVCV----------------VTGRETEWTAVQDQVSRAIYYKNTRTGQSQWEEPDAVREL 568 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1870.5886.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1870.5886.1 >prot_Ecto-sp13_S_contig1870.5886.1 ID=prot_Ecto-sp13_S_contig1870.5886.1|Name=mRNA_Ecto-sp13_S_contig1870.5886.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=910bp RALAAVDETRRKRMERQHVEHRGVQQDEEKLRRRQAKREQLMKKRKNMEEback to top mRNA from alignment at Ecto-sp13_S_contig1870:10721..14636- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1870.5886.1 ID=mRNA_Ecto-sp13_S_contig1870.5886.1|Name=mRNA_Ecto-sp13_S_contig1870.5886.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3916bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1870:10721..14636- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1870:10721..14636- >mRNA_Ecto-sp13_S_contig1870.5886.1 ID=mRNA_Ecto-sp13_S_contig1870.5886.1|Name=mRNA_Ecto-sp13_S_contig1870.5886.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2730bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1870:10721..14636- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |