mRNA_Ecto-sp13_S_contig1870.5885.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1870.5885.1
Unique NamemRNA_Ecto-sp13_S_contig1870.5885.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1870.5885.1 vs. uniprot
Match: D8LBF4_ECTSI (Dihydrolipoyl dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBF4_ECTSI)

HSP 1 Score: 972 bits (2512), Expect = 0.000e+0
Identity = 496/503 (98.61%), Postives = 499/503 (99.20%), Query Frame = 3 
Query:   96 MAQIGVHFRATRQLVGTMRASPLLVSRSRAFSASADPYDVVVVGGGPGGYVAAIKSSQLGLKTAVVESRGKLGGTCLNVGCIPSKALLHSSHLYHEATHNMASHGISVGDVSMDVGKMMENKDSKVEGLTGGIEYLCKKYKVDYIKGFGKLGGPNTVNVDLTEGGLQSLETRNIIIATGSEVTPLPPVPVDNAQQKIVDSTGALELKEVPKSLVLIGGGVIGLEMGSVWARLGSKVTVVEFLDRVCPSMDHEITKAFTRVLKKQGLKFKLKTKVTSSEVTESGVKLTMEPSKGGASSTMDADVVLVATGRRPFTANLGCDELGISLDKMGRIEVDPHFRTAVPSVFAIGDCISGPMLAHKAEEEGIACVEGIAGFAGHVNYDAIPGVVYTYPEVAEVGKTEEALKEAGVAYNKGTFPFSANSRASCVGDKDGMVKILSDKETDRILGAHILGPNAGEMIAEVVLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF 1604
            MAQIGVHFRATRQLVGT+RASPLL  R RA SASADPYDVVVVGGGPGGYVAAIKSSQLGLKTAVVESRGKLGGTCLNVGCIPSKALLHSSHLYHEATHNMASHGISVGDVSMDVGKMMENKDSKVEGLTGGIEYLCKKYKVDYIKGFGKLGGPNTVNVDLTEGGLQSLETRNI+IATGSEVTPLPPVPVDNAQQKIVDSTGALELKEVPKSLVLIGGGVIGLEMGSVWARLGSKVTVVEFLDRVCPSMDHEITKAFTRVLKKQGLKFKLKTKVTSSEVTESGVKLTMEPSKGGASSTM+ADVVLVATGRRPFTANLGCDELGISLDKMGRIEVDPHFRTAVPSVFAIGDCISGPMLAHKAEEEGIACVEGIAGFAGHVNYDAIPGVVYTYPEVAEVGKTEEALKEAGVAYNKGTFPFSANSRASCVGDKDGMVKILSDKETDRILGAHILGPNAGEMIAEVVLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF
Sbjct:    1 MAQIGVHFRATRQLVGTVRASPLLGCR-RALSASADPYDVVVVGGGPGGYVAAIKSSQLGLKTAVVESRGKLGGTCLNVGCIPSKALLHSSHLYHEATHNMASHGISVGDVSMDVGKMMENKDSKVEGLTGGIEYLCKKYKVDYIKGFGKLGGPNTVNVDLTEGGLQSLETRNIVIATGSEVTPLPPVPVDNAQQKIVDSTGALELKEVPKSLVLIGGGVIGLEMGSVWARLGSKVTVVEFLDRVCPSMDHEITKAFTRVLKKQGLKFKLKTKVTSSEVTESGVKLTMEPSKGGASSTMEADVVLVATGRRPFTANLGCDELGISLDKMGRIEVDPHFRTAVPSVFAIGDCISGPMLAHKAEEEGIACVEGIAGFAGHVNYDAIPGVVYTYPEVAEVGKTEEALKEAGVAYNKGTFPFSANSRASCVGDKDGMVKILSDKETDRILGAHILGPNAGEMIAEVVLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF 502
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BLAST of mRNA_Ecto-sp13_S_contig1870.5885.1 vs. uniprot
Match: A0A835YXI3_9STRA (Dihydrolipoyl dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXI3_9STRA)

HSP 1 Score: 768 bits (1982), Expect = 2.320e-274
Identity = 382/473 (80.76%), Postives = 419/473 (88.58%), Query Frame = 3 
Query:  189 SASAD-PYDVVVVGGGPGGYVAAIKSSQLGLKTAVVESRGKLGGTCLNVGCIPSKALLHSSHLYHEATHNMASHGISVGDVSMDVGKMMENKDSKVEGLTGGIEYLCKKYKVDYIKGFGKLGGPNTVNVDLTEGGLQSLETRNIIIATGSEVTPLPPVPVDNAQQKIVDSTGALELKEVPKSLVLIGGGVIGLEMGSVWARLGSKVTVVEFLDRVCPSMDHEITKAFTRVLKKQGLKFKLKTKVTSSEVTESGVKLTMEPSKGGASSTMDADVVLVATGRRPFTANLGCDELGISLDKMGRIEVDPHFRTAVPSVFAIGDCISGPMLAHKAEEEGIACVEGIAGFAGHVNYDAIPGVVYTYPEVAEVGKTEEALKEAGVAYNKGTFPFSANSRASCVGDKDGMVKILSDKETDRILGAHILGPNAGEMIAEVVLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF 1604
            +A+AD  YDVVVVGGGPGGYVAAIK+SQLGLKTA VE+RG+LGGTCLNVGCIPSKALLHSSHLYH+  H+ A HGISVGD+S+DV KMM NK   VEGLTGGIEYL KKYKVDY  GFGKL   NTV+VDL  GG  SL+T+NI+IATGSEV PLPPVPVDNA  KIVDSTGALELKEVPK L +IGGG IGLEMGSVW RLGS+VTV+EFLDRVCP+MD EITK FTRVLKKQG  FKL TKVT+SEVT++GVKLT+EPSKGG ++T +ADVVLV+TGRRPFT  LGC ELGI +DK+GRIEVD HFRTAVPSV+A GDCI+GPMLAHKAEEEGIACVEGIAGFAGHVNYD IPGVVYT+PEVA VGKTEE LK A V+YNKGTFPFSANSRA C G  DG++KIL+DKETDRILG HI+GPNAGE+I E VLAMEYGASSED+ARTCHAHPTLSEALKEACMATYDKPIHF
Sbjct:    2 AAAADGEYDVVVVGGGPGGYVAAIKASQLGLKTACVEARGRLGGTCLNVGCIPSKALLHSSHLYHDVKHDAARHGISVGDISIDVSKMMANKSKAVEGLTGGIEYLFKKYKVDYHVGFGKLADANTVSVDLNAGGTTSLKTKNILIATGSEVAPLPPVPVDNAAGKIVDSTGALELKEVPKKLAVIGGGYIGLEMGSVWNRLGSEVTVIEFLDRVCPAMDQEITKNFTRVLKKQGFAFKLNTKVTASEVTDTGVKLTLEPSKGGKATTFEADVVLVSTGRRPFTQGLGCAELGIKMDKIGRIEVDSHFRTAVPSVYAFGDCIAGPMLAHKAEEEGIACVEGIAGFAGHVNYDCIPGVVYTHPEVATVGKTEEELKAANVSYNKGTFPFSANSRARCTGSADGLIKILADKETDRILGVHIMGPNAGELIGEAVLAMEYGASSEDVARTCHAHPTLSEALKEACMATYDKPIHF 474
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BLAST of mRNA_Ecto-sp13_S_contig1870.5885.1 vs. uniprot
Match: A0A7S1UDP3_9STRA (Dihydrolipoyl dehydrogenase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDP3_9STRA)

HSP 1 Score: 711 bits (1835), Expect = 1.660e-250
Identity = 353/467 (75.59%), Postives = 395/467 (84.58%), Query Frame = 3 
Query:  201 DPYDVVVVGGGPGGYVAAIKSSQLGLKTAVVESRGKLGGTCLNVGCIPSKALLHSSHLYHEATHNMASHGISVGDVSMDVGKMMENKDSKVEGLTGGIEYLCKKYKVDYIKGFGKLGGPNTVNVDLTEGGLQSLETRNIIIATGSEVTPLPPVPVDNAQQKIVDSTGALELKEVPKSLVLIGGGVIGLEMGSVWARLGSKVTVVEFLDRVCPSMDHEITKAFTRVLKKQGLKFKLKTKVTSSEVTESGVKLTMEPSKGGASSTMDADVVLVATGRRPFTANLGCDELGISLDKMGRIEVDPHFRTAVPSVFAIGDCISGPMLAHKAEEEGIACVEGIAGFAGHVNYDAIPGVVYTYPEVAEVGKTEEALKEAGVAYNKGTFPFSANSRASCVGDKDGMVKILSDKETDRILGAHILGPNAGEMIAEVVLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIH 1601
            D YD+VVVGGGPGGYV AIK+SQLGLKTA VE RG LGGTCLNVGCIPSKALLHSSHLY EA H+   HGI V  V +D+  MM NK + V GLTGGIEYL KKY VDY+KG+G L    TV+V L EGG Q+L T+NI+IATGSEVTPLPPVPVDNA +KIVDSTGALEL+ VP+ +V++G GVIGLEMGSVW RLGS+VTVVEFLDR+ P +D E+ K F  +LKKQG+KFKLKTKVTSSEVT++GV LTMEPSKGG + T DADVVLVATGR+PFT NLG + LGI  D++GRIEVD HFRT VP+VFAIGD I GPMLAHKAEEEGIACVE IAGFAGHVNYD IPGVVYT PE+A VGKTE+ LKEAGV YNKG+FPFSANSRA  V   +G +K+L+D ETDRILG HI+GPNAGEMI+E VL MEYGASSEDIARTCHAHPTLSEALKEACMAT+DKPIH
Sbjct:  103 DEYDLVVVGGGPGGYVGAIKASQLGLKTACVEMRGSLGGTCLNVGCIPSKALLHSSHLYEEALHDFEGHGIKVSGVELDLPAMMANKATAVTGLTGGIEYLFKKYGVDYVKGYGSLSSATTVDVALNEGGSQTLSTKNIMIATGSEVTPLPPVPVDNAGKKIVDSTGALELESVPEKMVVVGAGVIGLEMGSVWRRLGSEVTVVEFLDRITPGIDKEVAKKFQSILKKQGMKFKLKTKVTSSEVTDAGVTLTMEPSKGGDAETFDADVVLVATGRKPFTENLGLENLGIETDRLGRIEVDDHFRTKVPNVFAIGDVIDGPMLAHKAEEEGIACVENIAGFAGHVNYDVIPGVVYTMPELAVVGKTEDELKEAGVKYNKGSFPFSANSRARAVNTPEGFIKVLADAETDRILGVHIIGPNAGEMISEAVLGMEYGASSEDIARTCHAHPTLSEALKEACMATFDKPIH 569
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BLAST of mRNA_Ecto-sp13_S_contig1870.5885.1 vs. uniprot
Match: A0A7R9W9U4_9STRA (Dihydrolipoyl dehydrogenase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W9U4_9STRA)

HSP 1 Score: 701 bits (1810), Expect = 7.330e-248
Identity = 356/491 (72.51%), Postives = 406/491 (82.69%), Query Frame = 3 
Query:  153 ASPLLVSRS--RAFSAS----ADPYDVVVVGGGPGGYVAAIKSSQLGLKTAVVESRGKLGGTCLNVGCIPSKALLHSSHLYHEATHNMASHGISV-GDVSMDVGKMMENKDSKVEGLTGGIEYLCKKYKVDYIKGFGKLGGPNTVNVDLTEGGLQSLETRNIIIATGSEVTPLPPVPVDNAQQKIVDSTGALELKEVPKSLVLIGGGVIGLEMGSVWARLGSKVTVVEFLDRVCPSMDHEITKAFTRVLKKQGLKFKLKTKVTSSEVTESGVKLTMEPSKGGASSTMDADVVLVATGRRPFTANLGCDELGISLDKMGRIEVDPHFRTAVPSVFAIGDCISGPMLAHKAEEEGIACVEGIAGFAGHVNYDAIPGVVYTYPEVAEVGKTEEALKEAGVAYNKGTFPFSANSRASCVGDKDGMVKILSDKETDRILGAHILGPNAGEMIAEVVLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF 1604
            AS L + RS  R FS+S     D YDVVVVGGGPGGYVAAIK+ QLGLKTA VE RG LGGTCLNVGCIPSKALL SSH YH+   + A HGI + G+V MDVGKM E+K   V+GLTGGIE+L KK+KVDY KG G + GPN V+V L EGG ++L+T+N++IATGSEVTPLPPVPVDN   KIVDSTGALE+ E+PK++ +IGGGVIGLEMGSVW+RLG++VTVVEF+DR+CP+MD E+TK F   LKKQG KF+LKTKV SS V   GV LT E +KGG   T   D+VLVATGRRP+T  LG + LGI  DK+GRIEVD HF+TAVPS++AIGDCI GPMLAHKAEEEGIA +E IAGFAGHVNYDAIPGV+YTYPEVA VGKTEE LKEAGV+++KG+FPF+ANSRA   GD +G VKIL+DKETDRILGAHI+GPNAGEMIAE VL MEYGASSEDIARTCHAHPTLSEA KEACM TYDKPIHF
Sbjct:    7 ASSLALRRSAVRHFSSSNVALGDQYDVVVVGGGPGGYVAAIKAGQLGLKTACVEMRGTLGGTCLNVGCIPSKALLQSSHHYHDVKTHFADHGIQIDGEVKMDVGKMQESKAGTVKGLTGGIEHLFKKHKVDYFKGKGSISGPNAVSVALNEGGNETLDTKNVVIATGSEVTPLPPVPVDNDGGKIVDSTGALEISEIPKTMAVIGGGVIGLEMGSVWSRLGTEVTVVEFMDRLCPAMDQELTKKFQTTLKKQGFKFQLKTKVMSSVVEGDGVVLTTEAAKGGKEKTEKYDIVLVATGRRPYTDGLGLEALGIQTDKLGRIEVDEHFKTAVPSIYAIGDCIDGPMLAHKAEEEGIAAIETIAGFAGHVNYDAIPGVIYTYPEVASVGKTEEELKEAGVSFSKGSFPFAANSRARANGDTEGFVKILADKETDRILGAHIIGPNAGEMIAEAVLGMEYGASSEDIARTCHAHPTLSEAFKEACMDTYDKPIHF 497
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BLAST of mRNA_Ecto-sp13_S_contig1870.5885.1 vs. uniprot
Match: A0A1E7EUM2_9STRA (Dihydrolipoyl dehydrogenase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUM2_9STRA)

HSP 1 Score: 696 bits (1797), Expect = 7.420e-246
Identity = 346/479 (72.23%), Postives = 398/479 (83.09%), Query Frame = 3 
Query:  171 SRSRAFSASADPYDVVVVGGGPGGYVAAIKSSQLGLKTAVVESRGKLGGTCLNVGCIPSKALLHSSHLYHEATHNMASHGISV-GDVSMDVGKMMENKDSKVEGLTGGIEYLCKKYKVDYIKGFGKLGGPNTVNVDLTEGGLQSLETRNIIIATGSEVTPLPPVPVDNAQQKIVDSTGALELKEVPKSLVLIGGGVIGLEMGSVWARLGSKVTVVEFLDRVCPSMDHEITKAFTRVLKKQGLKFKLKTKVTSSEVTESGVKLTMEPSKGGASSTMDADVVLVATGRRPFTANLGCDELGISLDKMGRIEVDPHFRTAVPSVFAIGDCISGPMLAHKAEEEGIACVEGIAGFAGHVNYDAIPGVVYTYPEVAEVGKTEEALKEAGVAYNKGTFPFSANSRASCVGDKDGMVKILSDKETDRILGAHILGPNAGEMIAEVVLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF 1604
            S S+  +  AD YDVV+VGGGPGGYVAAIKS+QLG+KTA VE RG+LGGTCLNVGCIPSKALL SSH YH+A H+ A HGI   GD+SMD+ KM + K   VEGLTGGIEYL KKY VDY+KG GK+ GPN V V LT+GG +SL+T+NIIIA+GSEVTPLPPVPVDNA  K+VDSTGALE+  +PK + ++GGGVIGLEMGSVW+RLG++VTV+EFLDR+ P  D E+ K F  +LKKQG KF LKTKV  S V + GV LT EPSKGG +     DVVLV+TGRRP+T  LG +++GI  DK+GRIEVD HF+TAVPS+FAIGD ISGPMLAHKAEEEGIACVE IAGFAGHV YDAIPGVVYTYPEVA+VGKTEE LKEAG+AYN G FPF+ANSRA   G  DG VK+L+DKETD+ILG HI+GPNAGEMIAE V+A+EYGASSED+ARTCHAHPTLSEA KEACM TYD+PIHF
Sbjct:   21 SFSKTTATFADQYDVVIVGGGPGGYVAAIKSAQLGMKTACVEMRGRLGGTCLNVGCIPSKALLQSSHHYHDAKHHFADHGIVFDGDLSMDIDKMQDTKSKTVEGLTGGIEYLLKKYGVDYVKGKGKITGPNGVEVALTDGGSESLDTKNIIIASGSEVTPLPPVPVDNAGGKVVDSTGALEIGTIPKKMAVVGGGVIGLEMGSVWSRLGAEVTVIEFLDRILPMNDTEVAKKFQTILKKQGFKFNLKTKVVKSVVEDDGVVLTTEPSKGGDAKEEKFDVVLVSTGRRPYTEGLGLEDVGIQTDKLGRIEVDSHFKTAVPSIFAIGDAISGPMLAHKAEEEGIACVETIAGFAGHVCYDAIPGVVYTYPEVADVGKTEEELKEAGIAYNVGNFPFAANSRARANGSADGFVKVLADKETDKILGVHIIGPNAGEMIAEAVIAIEYGASSEDMARTCHAHPTLSEAFKEACMDTYDQPIHF 499
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BLAST of mRNA_Ecto-sp13_S_contig1870.5885.1 vs. uniprot
Match: A0A7S2DGH1_9STRA (Dihydrolipoyl dehydrogenase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DGH1_9STRA)

HSP 1 Score: 693 bits (1788), Expect = 2.000e-244
Identity = 340/468 (72.65%), Postives = 389/468 (83.12%), Query Frame = 3 
Query:  201 DPYDVVVVGGGPGGYVAAIKSSQLGLKTAVVESRGKLGGTCLNVGCIPSKALLHSSHLYHEATHNMASHGISVGDVSMDVGKMMENKDSKVEGLTGGIEYLCKKYKVDYIKGFGKLGGPNTVNVDLTEGGLQSLETRNIIIATGSEVTPLPPVPVDNAQQKIVDSTGALELKEVPKSLVLIGGGVIGLEMGSVWARLGSKVTVVEFLDRVCPSMDHEITKAFTRVLKKQGLKFKLKTKVTSSEVTESGVKLTMEPSKGGASSTMDADVVLVATGRRPFTANLGCDELGISLDKMGRIEVDPHFRTAVPSVFAIGDCISGPMLAHKAEEEGIACVEGIAGFAGHVNYDAIPGVVYTYPEVAEVGKTEEALKEAGVAYNKGTFPFSANSRASCVGDKDGMVKILSDKETDRILGAHILGPNAGEMIAEVVLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF 1604
            D YD+VV+GGGPGGYVAAIK++QLGLKTA VE RG LGGTCLNVGCIPSKALLHSSHL+ EA H+ A HGI +G VSMDVG+MM +KD  V  LTGGIEYL KKYKVDY+KG+GK+  PN V V LTEGG Q L+T+NI+IATGSEVTPLPPVPVDNA +KIVDSTGAL+L E+PK +++IGGGVIGLEMGSVW RLG+ VTVVEFLDR+ P  D EI K F ++ KKQ +KFKL TKVT SE+    VKL +E  K G +S ++ADV LV+ GRRPFT  LG +E+G+  D++GRI VD HF+T +PS++AIGD I GPMLAHKAEEEGIACVE +AGF GHVNY AIPGV+YT+PEVA VGK+E+ LKE GVAYN G FPFSANSRA  V   DGMVK+LSDK TDRILGAHI+GPNAGEMIAE V+ MEYGASSEDIARTCHAHPTLSEA KEACMA YDKPIHF
Sbjct:   36 DQYDLVVIGGGPGGYVAAIKAAQLGLKTACVEGRGTLGGTCLNVGCIPSKALLHSSHLFEEANHDFAKHGIQLGSVSMDVGQMMASKDKAVSALTGGIEYLFKKYKVDYVKGYGKITSPNGVGVALTEGGNQDLDTKNILIATGSEVTPLPPVPVDNAGKKIVDSTGALDLTEIPKEMIVIGGGVIGLEMGSVWRRLGTNVTVVEFLDRIIPGTDSEIAKKFLQICKKQKMKFKLGTKVTGSEIDGDTVKLHVEDVKTGKASVLEADVCLVSIGRRPFTQGLGLEEMGLETDRIGRIVVDKHFQTKIPSIYAIGDAIDGPMLAHKAEEEGIACVESLAGFVGHVNYGAIPGVIYTFPEVATVGKSEDDLKEEGVAYNTGVFPFSANSRARAVDQSDGMVKVLSDKTTDRILGAHIIGPNAGEMIAEAVIGMEYGASSEDIARTCHAHPTLSEAFKEACMAAYDKPIHF 503
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BLAST of mRNA_Ecto-sp13_S_contig1870.5885.1 vs. uniprot
Match: A0A7S3H026_9STRA (Dihydrolipoyl dehydrogenase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H026_9STRA)

HSP 1 Score: 692 bits (1786), Expect = 3.110e-244
Identity = 345/472 (73.09%), Postives = 399/472 (84.53%), Query Frame = 3 
Query:  189 SASADPYDVVVVGGGPGGYVAAIKSSQLGLKTAVVESRGKLGGTCLNVGCIPSKALLHSSHLYHEATHNMASHGISVGDVSMDVGKMMENKDSKVEGLTGGIEYLCKKYKVDYIKGFGKLGGPNTVNVDLTEGGLQSLETRNIIIATGSEVTPLPPVPVDNAQQKIVDSTGALELKEVPKSLVLIGGGVIGLEMGSVWARLGSKVTVVEFLDRVCPSMDHEITKAFTRVLKKQGLKFKLKTKVTSSEVTESGVKLTMEPSKGGASSTMDADVVLVATGRRPFTANLGCDELGISLDKMGRIEVDPHFRTAVPSVFAIGDCISGPMLAHKAEEEGIACVEGIAGFAGHVNYDAIPGVVYTYPEVAEVGKTEEALKEAGVAYNKGTFPFSANSRASCVGDKDGMVKILSDKETDRILGAHILGPNAGEMIAEVVLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF 1604
            S + + YDVVVVGGGPGGYVAAIK++QLGLKTA VESRG LGGTCLNVGCIPSKALLHS+HL   A  + A HGI+V  +  D+ KMM+NK+  V+GLTGGIE L KK KV YIKGFGKL GPN+V+VDLT GG Q++E +NII+A GSEV+PLP   VDNA ++IVDSTGAL+L EVPK LV++GGGVIGLEMGSVW RLGS+VTVVEFLD + P MD EIT++F ++LKKQG  F L TKVT ++V  +GVKLT+EPS GGA++ +DADVVLV+TGRRPFT N+G + LGI  DK+GRI+VD HF+T VPS+FAIGD I GPMLAHKAEEEGIACVE IAGFAGHVNYDAIPGV+YT+PEVA VG+TEE L +AG+ Y KGTFPF ANSRA    D DG+VK+L+DKETD+ILG HI+G NAGEMIAE VLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF
Sbjct:   25 SVAGEKYDVVVVGGGPGGYVAAIKAAQLGLKTACVESRGSLGGTCLNVGCIPSKALLHSTHLLEHAQKDFAHHGITVSGIQYDLKKMMDNKNKVVKGLTGGIEMLFKKNKVTYIKGFGKLAGPNSVSVDLTAGGSQTVEAKNIILAVGSEVSPLPTAVVDNAGKRIVDSTGALDLTEVPKKLVVVGGGVIGLEMGSVWRRLGSEVTVVEFLDTITPGMDKEITQSFLKILKKQGFNFMLNTKVTGTKVEGNGVKLTVEPSAGGAATQLDADVVLVSTGRRPFTKNIGLEALGIETDKIGRIKVDHHFQTKVPSIFAIGDAIDGPMLAHKAEEEGIACVENIAGFAGHVNYDAIPGVIYTHPEVASVGQTEEQLIKAGIKYTKGTFPFQANSRARATLDADGLVKVLADKETDKILGMHIIGSNAGEMIAEGVLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF 496
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BLAST of mRNA_Ecto-sp13_S_contig1870.5885.1 vs. uniprot
Match: A0A7S4QKQ4_9STRA (Dihydrolipoyl dehydrogenase n=6 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S4QKQ4_9STRA)

HSP 1 Score: 693 bits (1788), Expect = 4.600e-244
Identity = 354/526 (67.30%), Postives = 409/526 (77.76%), Query Frame = 3 
Query:   75 HERERGTMAQIGVHFRATRQLVGTM--RASPLLVSRSRAFSASA--------------DPYDVVVVGGGPGGYVAAIKSSQLGLKTAVVESRGKLGGTCLNVGCIPSKALLHSSHLYHEATHNMASHGISVGDVSMDVGKMMENKDSKVEGLTGGIEYLCKKYKVDYIKGFGKLGGPNTVNVDLTEGGLQSLETRNIIIATGSEVTPLPPVPVDNAQQKIVDSTGALELKEVPKSLVLIGGGVIGLEMGSVWARLGSKVTVVEFLDRVCPSMDHEITKAFTRVLKKQGLKFKLKTKVTSSEVTESGVKLTMEPSKGGASSTMDADVVLVATGRRPFTANLGCDELGISLDKMGRIEVDPHFRTAVPSVFAIGDCISGPMLAHKAEEEGIACVEGIAGFAGHVNYDAIPGVVYTYPEVAEVGKTEEALKEAGVAYNKGTFPFSANSRASCVGDKDGMVKILSDKETDRILGAHILGPNAGEMIAEVVLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF 1604
            H   +  +A+I       +++  TM  RAS LL +RSRA  A++              D YDVVV+GGGPGGYVAAIK+ QLGLKTA VE RG LGGTCLNVGCIPSKALL SSH YH+A  + A HGI + D+ MD+ KM E K   V GLTGGIE+L KK+KVDY KG G L GPN V+V L +G  QSL+ +NII+ATGSEVTPLPPVPVDNA  KIVDSTGALE+ ++P+++ ++GGGVIGLEMGSVW+RLG+KVTV+EF+DR+CP+MD E+TK F + LKKQG KF+LKTKVT S V E GV LT E + GG       D+VLVATGRRP+T  LG ++LGI  DK+GRIEVD HF+TA+PS++AIGDCI GPMLAHKAEEEGIA VE IAGFAGHVNYDAIPGV+YTYPEVA VGKTEE LKEAG+ Y KGTFPF ANSRA   G  DG VK+L+DK TDRILG HI+GPN GEMIAE VL MEYGASSEDIARTCHAHPTLSEA KEACM TYDKPIHF
Sbjct:    2 HSNPKSGVARIPCEPSKNQKVFATMLSRAS-LLANRSRASFATSGGIRSFSSTNAILGDQYDVVVLGGGPGGYVAAIKAGQLGLKTACVEMRGTLGGTCLNVGCIPSKALLQSSHHYHDAKEHFADHGIVISDIKMDIDKMQEAKAKTVSGLTGGIEHLLKKHKVDYFKGKGSLSGPNGVSVALNDGSAQSLDAKNIILATGSEVTPLPPVPVDNAAGKIVDSTGALEINKIPETMAVVGGGVIGLEMGSVWSRLGTKVTVIEFMDRLCPAMDQELTKKFQQTLKKQGFKFQLKTKVTKSVVGEDGVTLTTEAAAGGKEKEEKYDIVLVATGRRPYTDGLGLEKLGIQTDKLGRIEVDEHFKTAIPSIYAIGDCIDGPMLAHKAEEEGIAAVETIAGFAGHVNYDAIPGVIYTYPEVAAVGKTEEELKEAGIEYTKGTFPFQANSRARANGSSDGFVKVLADKATDRILGVHIMGPNGGEMIAEGVLGMEYGASSEDIARTCHAHPTLSEAFKEACMDTYDKPIHF 526
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BLAST of mRNA_Ecto-sp13_S_contig1870.5885.1 vs. uniprot
Match: A0A7S1Y515_9STRA (Dihydrolipoyl dehydrogenase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y515_9STRA)

HSP 1 Score: 690 bits (1780), Expect = 2.830e-243
Identity = 345/479 (72.03%), Postives = 398/479 (83.09%), Query Frame = 3 
Query:  180 RAFSASA---DPYDVVVVGGGPGGYVAAIKSSQLGLKTAVVESRGKLGGTCLNVGCIPSKALLHSSHLYHEATHNMASHGISV-GDVSMDVGKMMENKDSKVEGLTGGIEYLCKKYKVDYIKGFGKLGGPNTVNVDLTEGGLQSLETRNIIIATGSEVTPLPPVPVDNAQQKIVDSTGALELKEVPKSLVLIGGGVIGLEMGSVWARLGSKVTVVEFLDRVCPSMDHEITKAFTRVLKKQGLKFKLKTKVTSSEVTESGVKLTMEPSKGGASSTMDADVVLVATGRRPFTANLGCDELGISLDKMGRIEVDPHFRTAVPSVFAIGDCISGPMLAHKAEEEGIACVEGIAGFAGHVNYDAIPGVVYTYPEVAEVGKTEEALKEAGVAYNKGTFPFSANSRASCVGDKDGMVKILSDKETDRILGAHILGPNAGEMIAEVVLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF 1604
            R+FS ++   D YDVVVVGGGPGGYVAAIK+ QLGLKTA VE RG+LGGTCLNVGCIPSKALL SSH YH+A  + + HGI + GDV+MD+ KM+  K  KVEGLTGGIEYL KKYKVDY KG GKL GPN V V L +GG +SL+T+N+I+ATGSEV+PLPPVPVDN   KIVDSTGAL++ ++P+++ +IGGGVIG+EMGSVW+RLGSKVTVVEF+D +CPSMD E+TK F   LKKQG KF+LKTKVT+S+V + GV LT E SKGG   T   D+VLVATGRRP+T  LG +E+GI+ DK+GRI+VD HFRTAVPS++AIGD I GPMLAHKAEEEGIA VE IAGFAGHVNYDAIPGV+YTYPEVA VGKTEE LKEAG+AY+KG FPFSANSRA   G  +G VKIL+D  TDRILG HI+GPNAGEMIAE V+ MEYGASSEDIARTCHAHPTLSEA KEACM  +  PIHF
Sbjct:   21 RSFSQTSVVGDQYDVVVVGGGPGGYVAAIKAGQLGLKTACVEMRGRLGGTCLNVGCIPSKALLQSSHHYHDAKEHFSDHGIVINGDVTMDIDKMLSVKAEKVEGLTGGIEYLLKKYKVDYFKGKGKLTGPNGVEVTLNDGGTESLDTKNVILATGSEVSPLPPVPVDNETGKIVDSTGALDISKIPETMAVIGGGVIGVEMGSVWSRLGSKVTVVEFMDGICPSMDKELTKKFQTSLKKQGFKFQLKTKVTASQVEDDGVLLTTEASKGGKEKTEKYDIVLVATGRRPYTDGLGLEEMGIATDKLGRIDVDEHFRTAVPSIYAIGDVIDGPMLAHKAEEEGIAAVETIAGFAGHVNYDAIPGVIYTYPEVASVGKTEEELKEAGIAYSKGNFPFSANSRARANGSSEGFVKILTDASTDRILGVHIIGPNAGEMIAEGVIGMEYGASSEDIARTCHAHPTLSEAFKEACMDAHGSPIHF 499
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BLAST of mRNA_Ecto-sp13_S_contig1870.5885.1 vs. uniprot
Match: A0A7R9UB69_9STRA (Dihydrolipoyl dehydrogenase n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UB69_9STRA)

HSP 1 Score: 690 bits (1780), Expect = 3.780e-243
Identity = 341/468 (72.86%), Postives = 388/468 (82.91%), Query Frame = 3 
Query:  201 DPYDVVVVGGGPGGYVAAIKSSQLGLKTAVVESRGKLGGTCLNVGCIPSKALLHSSHLYHEATHNMASHGISVGDVSMDVGKMMENKDSKVEGLTGGIEYLCKKYKVDYIKGFGKLGGPNTVNVDLTEGGLQSLETRNIIIATGSEVTPLPPVPVDNAQQKIVDSTGALELKEVPKSLVLIGGGVIGLEMGSVWARLGSKVTVVEFLDRVCPSMDHEITKAFTRVLKKQGLKFKLKTKVTSSEVTESGVKLTMEPSKGGASSTMDADVVLVATGRRPFTANLGCDELGISLDKMGRIEVDPHFRTAVPSVFAIGDCISGPMLAHKAEEEGIACVEGIAGFAGHVNYDAIPGVVYTYPEVAEVGKTEEALKEAGVAYNKGTFPFSANSRASCVGDKDGMVKILSDKETDRILGAHILGPNAGEMIAEVVLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF 1604
            D YD+ V+GGGPGGYVAAIK++QLG+KTA VESRG+LGGTCLNVGCIPSKALLHSSHLY EA H  A HGI +  V +D+  MM NK   V GLTGGIEYL KKY VDY+KGFG L    TV+V L +GG Q ++T+N++IATGSE TPLPP PVDNA ++IVDSTGALEL+ VP+ +++IG GVIGLEMGSVW RLG+ VTVVEFLD   P MD EI+K F ++LKKQG+ FKL TKVT++EVT SGVK+TMEPSKGG +  MD DVVLVATGRRPFT NLG + LGI  D++GRI VD HFRT V  V+AIGD I GPMLAHKAEEEGIA VE +AG+AGHVNYDAIPGV+YT PE+A VGKTE+ LKEAGVAYNKGTFPF+ANSRA  V   DG +K+LSD  TDRILG HI+GPNAGEMI+E VL MEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF
Sbjct:   40 DDYDICVIGGGPGGYVAAIKAAQLGMKTACVESRGRLGGTCLNVGCIPSKALLHSSHLYEEANHEFAGHGIKLSGVELDLPTMMANKQDAVVGLTGGIEYLFKKYGVDYVKGFGTLQDSQTVDVSLLDGGNQVVKTKNVVIATGSEPTPLPPAPVDNAGKRIVDSTGALELESVPEKMIVIGAGVIGLEMGSVWRRLGADVTVVEFLDHSTPGMDSEISKKFQQILKKQGVNFKLSTKVTNTEVTSSGVKVTMEPSKGGDAEQMDVDVVLVATGRRPFTNNLGLENLGIETDRLGRIPVDDHFRTKVQGVYAIGDVIDGPMLAHKAEEEGIAVVETLAGYAGHVNYDAIPGVIYTMPELANVGKTEDELKEAGVAYNKGTFPFTANSRARAVKTVDGFIKVLSDASTDRILGVHIIGPNAGEMISEAVLGMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF 507
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1870.5885.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBF4_ECTSI0.000e+098.61Dihydrolipoyl dehydrogenase n=2 Tax=Ectocarpus Tax... [more]
A0A835YXI3_9STRA2.320e-27480.76Dihydrolipoyl dehydrogenase n=1 Tax=Tribonema minu... [more]
A0A7S1UDP3_9STRA1.660e-25075.59Dihydrolipoyl dehydrogenase n=1 Tax=Phaeomonas par... [more]
A0A7R9W9U4_9STRA7.330e-24872.51Dihydrolipoyl dehydrogenase n=1 Tax=Pseudictyota d... [more]
A0A1E7EUM2_9STRA7.420e-24672.23Dihydrolipoyl dehydrogenase n=1 Tax=Fragilariopsis... [more]
A0A7S2DGH1_9STRA2.000e-24472.65Dihydrolipoyl dehydrogenase n=1 Tax=Dictyocha spec... [more]
A0A7S3H026_9STRA3.110e-24473.09Dihydrolipoyl dehydrogenase n=1 Tax=Spumella elong... [more]
A0A7S4QKQ4_9STRA4.600e-24467.30Dihydrolipoyl dehydrogenase n=6 Tax=Lithodesmiacea... [more]
A0A7S1Y515_9STRA2.830e-24372.03Dihydrolipoyl dehydrogenase n=1 Tax=Grammatophora ... [more]
A0A7R9UB69_9STRA3.780e-24372.86Dihydrolipoyl dehydrogenase n=2 Tax=Pinguiococcus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1870contigEcto-sp13_S_contig1870:5537..10245 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score695.3
Seed ortholog evalue2.1e-197
Seed eggNOG ortholog159749.K0RDB2
Preferred nameDLD
Model size1957
KEGG rclassRC00004,RC00022,RC00583,RC02742,RC02833,RC02834
KEGG koko:K00382,ko:K17583
KEGG ReactionR00209,R01221,R01698,R03815,R07618,R08549
KEGG Pathwayko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00009,M00011,M00036,M00307,M00532
Hectar predicted targeting categorymitochondrion
GOsGO:0000003,GO:0000166,GO:0001505,GO:0001669,GO:0003006,GO:0003674,GO:0003824,GO:0004148,GO:0004375,GO:0004591,GO:0004738,GO:0004739,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0005773,GO:0005929,GO:0005947,GO:0005960,GO:0005967,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006091,GO:0006099,GO:0006101,GO:0006103,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006508,GO:0006520,GO:0006544,GO:0006546,GO:0006549,GO:0006550,GO:0006551,GO:0006552,GO:0006563,GO:0006564,GO:0006573,GO:0006574,GO:0006629,GO:0006631,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006748,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007369,GO:0007568,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009060,GO:0009063,GO:0009069,GO:0009070,GO:0009071,GO:0009081,GO:0009083,GO:0009106,GO:0009108,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009152,GO:0009161,GO:0009165,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009260,GO:0009295,GO:0009353,GO:0009653,GO:0009790,GO:0009987,GO:0012505,GO:0015980,GO:0016053,GO:0016054,GO:0016310,GO:0016491,GO:0016624,GO:0016638,GO:0016642,GO:0016651,GO:0016667,GO:0016668,GO:0016903,GO:0016999,GO:0017144,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019464,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0019953,GO:0021700,GO:0022412,GO:0022414,GO:0022900,GO:0022904,GO:0030062,GO:0030141,GO:0030154,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032991,GO:0033218,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036094,GO:0036211,GO:0042133,GO:0042135,GO:0042391,GO:0042645,GO:0042737,GO:0042743,GO:0042773,GO:0042775,GO:0042995,GO:0043159,GO:0043167,GO:0043168,GO:0043170,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043544,GO:0043603,GO:0043604,GO:0043648,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0045333,GO:0046034,GO:0046390,GO:0046394,GO:0046395,GO:0046483,GO:0046496,GO:0048037,GO:0048232,GO:0048240,GO:0048468,GO:0048469,GO:0048515,GO:0048598,GO:0048609,GO:0048856,GO:0048869,GO:0050660,GO:0050662,GO:0051068,GO:0051186,GO:0051188,GO:0051287,GO:0051704,GO:0055086,GO:0055114,GO:0061732,GO:0065007,GO:0065008,GO:0070013,GO:0071616,GO:0071704,GO:0072350,GO:0072521,GO:0072522,GO:0072524,GO:0072593,GO:0090407,GO:0097159,GO:0097223,GO:0097708,GO:0098798,GO:0099503,GO:0106077,GO:0120025,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1901681,GO:1902494,GO:1990204,GO:1990234
Exons7
EggNOG free text desc.FAD dependent oxidoreductase
EggNOG OGs2XA5H@2836,COG1249@1,KOG1335@2759
Ec32 ortholog descriptiondihydrolipoamide dehydrogenase
Ec32 orthologEc-27_004160.1
EC1.8.1.4
Cds size1512
COG Functional cat.C
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEbr01601,ko00000,ko00001,ko00002,ko01000,ko01009,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1870.5885.1prot_Ecto-sp13_S_contig1870.5885.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1870 5887..10150 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462958.748996-UTR-Ecto-sp13_S_contig1870:5536..58861681462958.748996-UTR-Ecto-sp13_S_contig1870:5536..5886Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1870 5537..5886 -
1681462958.8460612-UTR-Ecto-sp13_S_contig1870:10150..102451681462958.8460612-UTR-Ecto-sp13_S_contig1870:10150..10245Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1870 10151..10245 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462958.763183-CDS-Ecto-sp13_S_contig1870:5886..62101681462958.763183-CDS-Ecto-sp13_S_contig1870:5886..6210Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1870 5887..6210 -
1681462958.7801683-CDS-Ecto-sp13_S_contig1870:6482..68511681462958.7801683-CDS-Ecto-sp13_S_contig1870:6482..6851Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1870 6483..6851 -
1681462958.7914834-CDS-Ecto-sp13_S_contig1870:7317..75121681462958.7914834-CDS-Ecto-sp13_S_contig1870:7317..7512Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1870 7318..7512 -
1681462958.8033655-CDS-Ecto-sp13_S_contig1870:7645..78461681462958.8033655-CDS-Ecto-sp13_S_contig1870:7645..7846Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1870 7646..7846 -
1681462958.8175964-CDS-Ecto-sp13_S_contig1870:7983..81511681462958.8175964-CDS-Ecto-sp13_S_contig1870:7983..8151Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1870 7984..8151 -
1681462958.8287501-CDS-Ecto-sp13_S_contig1870:9668..98401681462958.8287501-CDS-Ecto-sp13_S_contig1870:9668..9840Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1870 9669..9840 -
1681462958.837618-CDS-Ecto-sp13_S_contig1870:10067..101501681462958.837618-CDS-Ecto-sp13_S_contig1870:10067..10150Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1870 10068..10150 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1870.5885.1

>prot_Ecto-sp13_S_contig1870.5885.1 ID=prot_Ecto-sp13_S_contig1870.5885.1|Name=mRNA_Ecto-sp13_S_contig1870.5885.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=504bp
MAQIGVHFRATRQLVGTMRASPLLVSRSRAFSASADPYDVVVVGGGPGGY
VAAIKSSQLGLKTAVVESRGKLGGTCLNVGCIPSKALLHSSHLYHEATHN
MASHGISVGDVSMDVGKMMENKDSKVEGLTGGIEYLCKKYKVDYIKGFGK
LGGPNTVNVDLTEGGLQSLETRNIIIATGSEVTPLPPVPVDNAQQKIVDS
TGALELKEVPKSLVLIGGGVIGLEMGSVWARLGSKVTVVEFLDRVCPSMD
HEITKAFTRVLKKQGLKFKLKTKVTSSEVTESGVKLTMEPSKGGASSTMD
ADVVLVATGRRPFTANLGCDELGISLDKMGRIEVDPHFRTAVPSVFAIGD
CISGPMLAHKAEEEGIACVEGIAGFAGHVNYDAIPGVVYTYPEVAEVGKT
EEALKEAGVAYNKGTFPFSANSRASCVGDKDGMVKILSDKETDRILGAHI
LGPNAGEMIAEVVLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKP
IHF*
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mRNA from alignment at Ecto-sp13_S_contig1870:5537..10245-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1870.5885.1 ID=mRNA_Ecto-sp13_S_contig1870.5885.1|Name=mRNA_Ecto-sp13_S_contig1870.5885.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4709bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1870:5537..10245- (Ectocarpus species13 EcNAP12_S_4_19m)
GACGCGGGACAAACATACATCCTTTCCGTCCCAGGTTCCGCGTGCGCGGC
GACACAACCCGACCCTACCTCGATCACGAGAGAGAGAGGGGGACTATGGC
TCAGATAGGTGTCCACTTCCGCGCAACTCGCCAACTTGTGGGTACTATGC
GAGCCTCTCCCCTGCTCGTCTCCAGAAGGTGATGGGATGATGGTGCTTTC
ACGCGAAGAACATGCCGCACTTATCTTGCACAATGCCCGCATCTTGAAGT
ATAGTGACGCACACCCACGGACACGTGATGGTATTTGGTTTGCCTACCAG
ACAGCATCGCTCTTTTTTCGTCGAACGTCTACACGCGTGCACCTCGGAGA
GAATGGCTTGCTGTAACTTTCTCACTGCTGCTGTTGATTCTCTCGGTGGA
TCTAGCAGGGCTTTCTCGGCATCTGCTGACCCCTATGATGTCGTCGTAGT
AGGAGGAGGTCCCGGCGGGTATGTAGCTGCCATCAAGTCGAGCCAACTGG
GGCTTAAGACCGCTGTCGTGGAGTCTCGAGGCAAGCTAGGAGGTACCTGC
CTCAACGTTGGGTGCATCCCTTCCAAGGTGTGGGAGGTCATGTGCTGGGA
TGGAGTTTCATGTCAGTTTTCGATGGTATCGATGTTTCGATGATTCGATC
ACGACCCCGTTGTTCTGGCACCTTTTTCGTGTTCGTGAAGTATGTTCGAA
CAGTTCTGCAGCACAGCAGTTATGCAGCACTATTGCTGTACCTGGTATTT
TGTATGTGGAAGTTGTGGATAGCAGAGGTTGATGGGTTGATCCTGACAGG
TACTAGAACATGCAACCGGGGAAGCAACAGGTTGACGAAGGAACTCTTTC
GGCAGCCAGTTTTTACTCATGTCAATCGATGTCAAATGTACAATATTTTT
TACATTCCGCAGTATAATCCTCGTGTTCACCGGATGTACCGCGGTGTTAG
CCGGTGAGGCCGGCGATCTGAACACTCGGTAGTTGGTGACCTCGACAACT
GCTGTTTACCGGTTGCGCTCGAATTGGCGTCCCGCCGAGATGTGTTCCGC
ATTTCGCACCAAGTGGTGGAGAGCTGTTCGTGATTCTTTGGTACAGAAAC
AAGGGTAAAACCCTCCCAAAAAACACCGCTTGTACAAATAGGATATGTAG
TAAAAAAGTTTCTTCGGTGTGACCCCGCATTGGAACTGAGAGGAACGCTT
GTACTTGCGCATTAATAGTGTAGCATTCCGGAACAGCAGCGTGTAAATAA
CGTTACAGAGAACGAAGCTGATCGAGCAGTGTCTTAGGGCTCGTTCGCAA
AGTACACATTATTCATTATTCGACCCAGGGTTAATGGTGACGGGGAGGCT
ACTAACTATTTCGCGCCAGCGGTGTCGTGCGCTGAGAGGGAAGGTTGGCG
AGCTGAGGTAGAGGGAGCTCATGCGAACGCGGCGCAACCACGAGGAGTGC
TGGTGTCGATGTAGGAAACACTAATTCGGAACCCTCTTGATGTCTCGATA
GTGGAGAACTCGCTTTTGTACGTTTCGTAGTGAGAGGAGCGCAGCCAACC
TTGCCGTTCCCTTTAGCCCTTGGAGTAAAATGAAAGAATGGAGGGCTCCG
AGAAGGAGAGCTGTGGAACGTATGGGTCCACATAGAATGTCAATTCCGGG
CACTTCTTTAACCGACCGGTAAGGTTCCGGTAAGGTTTCATCTGCAAAAC
TGTAGCGTTGACAATGGTTGCACGCGAGTTTGTCGTAGCTGCAAGTCGTA
GGCATGATTTATGCGGTCTTGGAGTAACATCACTGTATTTATCCGTGAAG
CTGCAGGTGCCACAGCTGCGCTAAAATTGCGAGAAAAGCGCAGGGCCCCT
CAGGTTCTGATATCCATGTCACGGACTGTGTGTGTTGCAAGTCGTGTCGC
GCGATTCATCTCTCGCTGGAACTGTTGAAGCGCCTGTGAGCCGCAGGTGT
ATCGGCGGGTACATTGAACACGGCAACATCAAACGTGCAGGTTTAGAGCA
CTGCTTATCTTTCTTGTGAGGAGTCAAGATTTGCAACGTTTTTGCTGGTT
TACGCCTCATCCTTGGCTCTTACCCCCGCTCCGCCCTGTGGCAGGCATTG
CTGCATTCGTCCCACCTGTACCACGAGGCCACTCACAATATGGCTTCTCA
TGGAATCAGCGTGGGGGATGTTTCCATGGATGTTGGCAAGATGATGGAGA
ACAAAGACTCAAAAGTCGAGGGGCTTACTGGAGGAATCGAGTACCTCTGC
AAAAAGTACAAGGTACGCGATCACGTTGTGGTGGGTGTTGTAAAAAGCGC
TCTCAGTTGCAACACTGACATTGTAGGGTCTCGTTTCTTCCTTCCATCCA
CGCTTGTCCGCCCAACACGTGACGTGGCTCGCGTTTAAACTTGGCTCAGG
TGGACTACATCAAAGGGTTTGGCAAGCTTGGTGGGCCGAACACCGTGAAC
GTGGACCTGACGGAGGGTGGACTGCAATCCTTGGAGACGAGAAACATTAT
CATCGCCACTGGTTCGGAGGTGACTCCTCTCCCTCCTGTGCCCGTAGACA
ACGCGCAGCAGAAGATTGTGGACTCGACAGGCGCGCTGGAACTCAAAGAG
GTGACTATGTGTTCCAGATCAGCTCATGGTGCCATCATAACTTGTGCCGA
TCATGCTTGTCGAGTGCAGCGTCGCGTGCCCCAAGCACAGCTACGGCTCA
TTGATCTAGTTTATCGCGCTACTCGTTGCACAGGTCCCCAAGAGCCTGGT
ACTGATTGGGGGTGGCGTGATCGGGCTAGAGATGGGCTCTGTTTGGGCTC
GGCTGGGCTCAAAGGTTACGGTTGTGGAGTTCCTGGACCGGGTGTGTCCT
TCAATGGACCACGAGATCACCAAGGCCTTCACCCGTGTTCTCAAGAAGCA
GGGGCTCAAGTTCAAACTCAAAACTAAGGTTGGTGATACGCTCGTGGTAC
TGGTAGGCGTTCAGCGCCGTTTCTGAAATGGTCGCAGATGATGCGAGAAC
TGGTGGTTTCGACGTGTAATCTCGAAACAGGATACGTCCGGGCCCACTCA
CTTCAGCCCAACCCCCCAAAGTTGTCGTAGTGGTACACAGCTTTCAAGTA
AAGCGTGCTATGTGTTCTACTTTCATGAGTTCGTTCATGAGTCCGTTCTG
CTTGTTTCGACTCAGAGGCGATACGGACGGACGTGTATTTGGTGTGGTGT
ATCATGGTGTTCTCTTTTGTGCTTTCTCTTCAGTTTGATGCAGAAAAAAC
TGGTACAGCATTCGCGTCGTTGGCATCAATCGTAGGGTGCAGCCCTGCCT
CGGGCATGGTCGTTCAGAGGGCACCCTGCTCGCTCGATACGTCAGAAAAG
AAGTCAGCAACTAAGTCTTGATACGTATCGTCCTTTGAACGAAGGTCACG
TCTTCTGAGGTGACCGAATCAGGTGTCAAGCTCACCATGGAACCTTCAAA
GGGAGGAGCGTCTTCAACCATGGACGCGGACGTGGTGCTCGTCGCGACCG
GCCGGCGGCCGTTCACGGCCAACCTGGGCTGTGACGAGTTGGGCATCTCA
CTCGATAAGATGGGCCGTATCGAGGTGGACCCGCACTTCCGCACGGCAGT
GCCTTCAGTGTTTGCCATCGGTGACTGTATCTCGGGTCCCATGTTGGCAC
ATAAGGCCGAGGAAGAGGGCATCGCGTGCGTGGAAGGTATCGCAGGCTTC
GCTGGGCACGTGAACTACGACGCTATACCTGGAGTGGTTTACACGTACCC
GGAGGTCGCAGAGGTACGCGGGATCCTGGGATGTGATGGGTTCGGCTGTT
TTTTTTGTTGTTGTTGCCTTCGCATGAAACATCATTCTGGTCGCTGCCAA
GTACCTTTTAGTATCCGCACCGGCTCAACTGACGCGGTTGCCTTCCGTGG
TCACAGGCCAACTACCAAAAACACAAGTACAAATTCTACGCATCACACAT
GTTTTGTGATTGATTTTTCATGTGTCCTCCGCAAAGATTTTGCCAAGCAC
AAACCATCCTGGATTGCATTTTCGTCGCTCCCCAGGTGGGCAAGACAGAG
GAAGCGTTGAAAGAGGCGGGGGTGGCGTACAACAAGGGAACGTTCCCGTT
CTCCGCCAACAGTCGTGCCTCGTGCGTGGGTGACAAAGATGGAATGGTCA
AAATCCTCAGCGATAAGGAGACAGACCGTATTCTTGGCGCTCACATTCTG
GGGCCGAACGCCGGCGAAATGATCGCGGAGGTGGTGCTTGCCATGGAGTA
CGGAGCTTCGAGCGAAGATATTGCCAGAACGTGCCACGCCCACCCTACCC
TCAGTGAGGCGCTGAAAGAGGCTTGCATGGCAACGTACGACAAGCCTATC
CACTTCTAGTTTTCGTCTGCACCCTTTTGTTTCCTCGGCCAAGGGACGTG
CTTGGTTTTCTAAGTGCTGTTATTAAGTGTCGTTTGCTGTGTAGGATTCA
GGGCGAAGGTTGAGACGGGGCGGTATTATTCATTGAGCGGGTGAATTTTA
GGACGCGTGCCTTGTTCTACCGGCTGTGGGGCACTATTTCTTTCCCTTCT
TCTTTTTCGTAGATTTGGCAGCCTCGGCCTTCTTCTCTGCTTCCAGCTTT
TCTTGAATGAGCCGAGCCGCCTCTGCCTCCATTGCGGCTTGTTGGGCAAA
CCTGAATGTGAATTGTGTGTGCGGTTGATTCATCTCGTTGGAATGGCGAA
ACAATGCAT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1870:5537..10245-

>mRNA_Ecto-sp13_S_contig1870.5885.1 ID=mRNA_Ecto-sp13_S_contig1870.5885.1|Name=mRNA_Ecto-sp13_S_contig1870.5885.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1512bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1870:5537..10245- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCTCAGATAGGTGTCCACTTCCGCGCAACTCGCCAACTTGTGGGTAC
TATGCGAGCCTCTCCCCTGCTCGTCTCCAGAAGCAGGGCTTTCTCGGCAT
CTGCTGACCCCTATGATGTCGTCGTAGTAGGAGGAGGTCCCGGCGGGTAT
GTAGCTGCCATCAAGTCGAGCCAACTGGGGCTTAAGACCGCTGTCGTGGA
GTCTCGAGGCAAGCTAGGAGGTACCTGCCTCAACGTTGGGTGCATCCCTT
CCAAGGCATTGCTGCATTCGTCCCACCTGTACCACGAGGCCACTCACAAT
ATGGCTTCTCATGGAATCAGCGTGGGGGATGTTTCCATGGATGTTGGCAA
GATGATGGAGAACAAAGACTCAAAAGTCGAGGGGCTTACTGGAGGAATCG
AGTACCTCTGCAAAAAGTACAAGGTGGACTACATCAAAGGGTTTGGCAAG
CTTGGTGGGCCGAACACCGTGAACGTGGACCTGACGGAGGGTGGACTGCA
ATCCTTGGAGACGAGAAACATTATCATCGCCACTGGTTCGGAGGTGACTC
CTCTCCCTCCTGTGCCCGTAGACAACGCGCAGCAGAAGATTGTGGACTCG
ACAGGCGCGCTGGAACTCAAAGAGGTCCCCAAGAGCCTGGTACTGATTGG
GGGTGGCGTGATCGGGCTAGAGATGGGCTCTGTTTGGGCTCGGCTGGGCT
CAAAGGTTACGGTTGTGGAGTTCCTGGACCGGGTGTGTCCTTCAATGGAC
CACGAGATCACCAAGGCCTTCACCCGTGTTCTCAAGAAGCAGGGGCTCAA
GTTCAAACTCAAAACTAAGGTCACGTCTTCTGAGGTGACCGAATCAGGTG
TCAAGCTCACCATGGAACCTTCAAAGGGAGGAGCGTCTTCAACCATGGAC
GCGGACGTGGTGCTCGTCGCGACCGGCCGGCGGCCGTTCACGGCCAACCT
GGGCTGTGACGAGTTGGGCATCTCACTCGATAAGATGGGCCGTATCGAGG
TGGACCCGCACTTCCGCACGGCAGTGCCTTCAGTGTTTGCCATCGGTGAC
TGTATCTCGGGTCCCATGTTGGCACATAAGGCCGAGGAAGAGGGCATCGC
GTGCGTGGAAGGTATCGCAGGCTTCGCTGGGCACGTGAACTACGACGCTA
TACCTGGAGTGGTTTACACGTACCCGGAGGTCGCAGAGGTGGGCAAGACA
GAGGAAGCGTTGAAAGAGGCGGGGGTGGCGTACAACAAGGGAACGTTCCC
GTTCTCCGCCAACAGTCGTGCCTCGTGCGTGGGTGACAAAGATGGAATGG
TCAAAATCCTCAGCGATAAGGAGACAGACCGTATTCTTGGCGCTCACATT
CTGGGGCCGAACGCCGGCGAAATGATCGCGGAGGTGGTGCTTGCCATGGA
GTACGGAGCTTCGAGCGAAGATATTGCCAGAACGTGCCACGCCCACCCTA
CCCTCAGTGAGGCGCTGAAAGAGGCTTGCATGGCAACGTACGACAAGCCT
ATCCACTTCTAG
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