prot_Ecto-sp13_S_contig18696.5881.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig18696.5881.1
Unique Name	prot_Ecto-sp13_S_contig18696.5881.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	97

Homology

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BLAST of mRNA_Ecto-sp13_S_contig18696.5881.1 vs. uniprot
Match: A0A6H5JQV0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV0_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 1.520e-48
Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 0

Query:    1 DNVPYADFDAPVDSDNPKDSSATAIVTSALFELYELTGESSHLEKAQEFLSSLLLSSTSFDSSATDGWQAILRNSAAAWGDEAVGSATADYFLLESM 97
            DNVPYADFDAPVDSDNPKDSSATAIVTSALFEL+ELTGE ++LEKAQEFL+SLLLSST FDSSATDGWQAILRNSAAAWGDEAVGS TADYFLLESM
Sbjct:  213 DNVPYADFDAPVDSDNPKDSSATAIVTSALFELFELTGEPTYLEKAQEFLTSLLLSSTYFDSSATDGWQAILRNSAAAWGDEAVGSVTADYFLLESM 309

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BLAST of mRNA_Ecto-sp13_S_contig18696.5881.1 vs. uniprot
Match: D7FUK3_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUK3_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 1.380e-46
Identity = 83/97 (85.57%), Postives = 87/97 (89.69%), Query Frame = 0

Query:    1 DNVPYADFDAPVDSDNPKDSSATAIVTSALFELYELTGESSHLEKAQEFLSSLLLSSTSFDSSATDGWQAILRNSAAAWGDEAVGSATADYFLLESM 97
            DNVPYADFD PVDSDNP DSSATAIVTSALFEL+ELTGE S+LEKAQEFL SLLLSST FDSSATDGWQ ILRNS AAWGD A+G  TADYFLLES+
Sbjct:   58 DNVPYADFDDPVDSDNPNDSSATAIVTSALFELFELTGEPSYLEKAQEFLPSLLLSSTYFDSSATDGWQTILRNSTAAWGDAAMGFVTADYFLLESI 154

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BLAST of mRNA_Ecto-sp13_S_contig18696.5881.1 vs. uniprot
Match: D7FUJ9_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ9_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 2.630e-45
Identity = 87/97 (89.69%), Postives = 89/97 (91.75%), Query Frame = 0

Query:    1 DNVPYADFDAPVDSDNPKDSSATAIVTSALFELYELTGESSHLEKAQEFLSSLLLSSTSFDSSATDGWQAILRNSAAAWGDEAVGSATADYFLLESM 97
            DNVPYADFDAPVDSDNPKDSSATAIVTSALFEL+E TGE S+LEK QEFLSSLLLS   FDSSATDGWQAILRNSAAAWGD AVGS TADYFLLESM
Sbjct:  271 DNVPYADFDAPVDSDNPKDSSATAIVTSALFELFEQTGEPSYLEKGQEFLSSLLLSPNYFDSSATDGWQAILRNSAAAWGDAAVGSVTADYFLLESM 367

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BLAST of mRNA_Ecto-sp13_S_contig18696.5881.1 vs. uniprot
Match: D7FQV4_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV4_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 1.200e-42
Identity = 81/97 (83.51%), Postives = 90/97 (92.78%), Query Frame = 0

Query:    1 DNVPYADFDAPVDSDNPKDSSATAIVTSALFELYELTGESSHLEKAQEFLSSLLLSSTSFDSSATDGWQAILRNSAAAWGDEAVGSATADYFLLESM 97
            DNVPYADFDAP +SDNPKDSSATAIV SALFEL+ELTGE ++LEKAQEFLSSLLLSST FDSSATDGWQA+LR SAAAWG+++VGS T DYFLLE+M
Sbjct:  213 DNVPYADFDAPENSDNPKDSSATAIVASALFELFELTGEPTYLEKAQEFLSSLLLSSTYFDSSATDGWQALLRESAAAWGEDSVGSVTGDYFLLEAM 309

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BLAST of mRNA_Ecto-sp13_S_contig18696.5881.1 vs. uniprot
Match: A0A6H5JQR3_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQR3_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 3.380e-39
Identity = 76/85 (89.41%), Postives = 78/85 (91.76%), Query Frame = 0

Query:    1 DNVPYADFDAPVDSDNPKDSSATAIVTSALFELYELTGESSHLEKAQEFLSSLLLSSTSFDSSATDGWQAILRNSAAAWGDEAVG 85
            DNVPYADFDAPVDSDNPKDSS TAIVTSAL EL+EL GE S+LEKAQEFLSSLLLSST FDS ATDGWQAILRNSA AWGDEAVG
Sbjct:  170 DNVPYADFDAPVDSDNPKDSSVTAIVTSALLELFELIGEPSYLEKAQEFLSSLLLSSTYFDSLATDGWQAILRNSAPAWGDEAVG 254

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BLAST of mRNA_Ecto-sp13_S_contig18696.5881.1 vs. uniprot
Match: R9PSV9_AGAAL (Putative unsaturated glucuronyl hydrolase n=4 Tax=Agarivorans TaxID=261825 RepID=R9PSV9_AGAAL)

HSP 1 Score: 85.5 bits (210), Expect = 1.700e-17
Identity = 46/95 (48.42%), Postives = 65/95 (68.42%), Query Frame = 0

Query:    3 VPYADFDAPVDSDNPKDSSATAIVTSALFELYELTGESSHLEKAQEFLSSLLLSSTSFDSSATDGWQAILRNSAAAWGDEAVGSATADYFLLESM 97
            VPY+DFDAP+D DNP+DSSATAIV SAL ELY++T +  +L  AQ+ L+SL   ST    +  + +Q+IL   +  WG+  VG+   DYF +E++
Sbjct:  304 VPYSDFDAPIDDDNPRDSSATAIVASALIELYKITQQEKYLNDAQQMLASL---STPKYLAMDNNYQSILLKGSEKWGEPEVGTIFGDYFFIEAL 395

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BLAST of mRNA_Ecto-sp13_S_contig18696.5881.1 vs. uniprot
Match: A0A6N6ZAI7_9BACT (Putative unsaturated glucuronyl hydrolase n=1 Tax=Puniceicoccaceae bacterium 5H TaxID=2508868 RepID=A0A6N6ZAI7_9BACT)

HSP 1 Score: 84.0 bits (206), Expect = 7.100e-17
Identity = 45/97 (46.39%), Postives = 66/97 (68.04%), Query Frame = 0

Query:    1 DNVPYADFDAPVDSDNPKDSSATAIVTSALFELYELTGESSHLEKAQEFLSSLLLSSTSFDSSATDGWQAILRNSAAAWGDEAVGSATADYFLLESM 97
            D VPY+DFDAP+DS+NP+D+SA AIV SA  ELY+ TGE  +L  A+  L+SL  +   + S  TD ++++L   +  WG+  VG+ T DY+ +E+M
Sbjct:  294 DYVPYSDFDAPIDSENPRDTSAAAIVASAALELYQTTGEQKYLTAAENMLNSL--TQAPYLSIGTD-YESVLAKGSEKWGEPEVGAVTGDYYFIEAM 387

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BLAST of mRNA_Ecto-sp13_S_contig18696.5881.1 vs. uniprot
Match: UPI00200F5605 (glycoside hydrolase family 88 protein n=1 Tax=Agarivorans sp. TSD2052 TaxID=2937286 RepID=UPI00200F5605)

HSP 1 Score: 82.4 bits (202), Expect = 2.140e-16
Identity = 45/95 (47.37%), Postives = 63/95 (66.32%), Query Frame = 0

Query:    3 VPYADFDAPVDSDNPKDSSATAIVTSALFELYELTGESSHLEKAQEFLSSLLLSSTSFDSSATDGWQAILRNSAAAWGDEAVGSATADYFLLESM 97
            +PYADFDAP+D  NP+DSSATAIV SAL ELY++T E  +L  A+  L+SL   +T    +    +Q+IL   +  WG+E VG+   DYF +E++
Sbjct:  298 IPYADFDAPIDDKNPRDSSATAIVASALLELYKITNEEKYLVDAESMLTSL---ATPEFLAMDPEYQSILLKGSEKWGEEEVGTIFGDYFFIEAL 389

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BLAST of mRNA_Ecto-sp13_S_contig18696.5881.1 vs. uniprot
Match: A0A4Y7ZV10_9GAMM (Glucuronyl hydrolase n=2 Tax=Psychromonas sp. RZ22 TaxID=2555643 RepID=A0A4Y7ZV10_9GAMM)

HSP 1 Score: 81.6 bits (200), Expect = 4.240e-16
Identity = 46/95 (48.42%), Postives = 62/95 (65.26%), Query Frame = 0

Query:    3 VPYADFDAPVDSDNPKDSSATAIVTSALFELYELTGESSHLEKAQEFLSSLLLSSTSFDSSATDGWQAILRNSAAAWGDEAVGSATADYFLLESM 97
            VPYADFDAP+D DNP+DSSA AIV SAL ELY++T E  +L  AQ  L+SL   +T    +    +++IL   +  WG+  VGS   DYF +E++
Sbjct:  310 VPYADFDAPLDKDNPRDSSAAAIVASALIELYKITKEEQYLNDAQAMLNSL---ATPTYLANNPDYESILLKGSEKWGEPEVGSIFGDYFFVEAL 401

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BLAST of mRNA_Ecto-sp13_S_contig18696.5881.1 vs. uniprot
Match: A0A6H5KCI0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI0_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 8.760e-15
Identity = 48/98 (48.98%), Postives = 66/98 (67.35%), Query Frame = 0

Query:    3 VPYADFDAPVDS-DNPKDSSATAIVTSALFELYELTGESSHLEKAQEFLSSLLLSSTSFDSSATDGWQAILRNSAAAWGDE--AVGSATADYFLLESM 97
            +P ADFDAP  + DN KDSSA AIV+S L EL+  T + ++L K+Q +LS+L  + T +   ATDG+Q+ILR +   WGDE   +G+   DYF LE+M
Sbjct:  339 IPPADFDAPESATDNGKDSSAAAIVSSGLLELFLETEDPTYLVKSQTYLSALF-AGTCYQPDATDGYQSILRRAMREWGDEDGEIGAVFGDYFFLETM 435

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig18696.5881.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig18696.5881.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17


Match Name	E-value	Identity	Description
A0A6H5JQV0_9PHAE	1.520e-48	92.78	GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
D7FUK3_ECTSI	1.380e-46	85.57	Unsaturated glucuronyl hydrolase, family GH88 n=1 ...	[more]
D7FUJ9_ECTSI	2.630e-45	89.69	Unsaturated glucuronyl hydrolase, family GH88 n=3 ...	[more]
D7FQV4_ECTSI	1.200e-42	83.51	Unsaturated glucuronyl hydrolase, family GH88 n=1 ...	[more]
A0A6H5JQR3_9PHAE	3.380e-39	89.41	GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
R9PSV9_AGAAL	1.700e-17	48.42	Putative unsaturated glucuronyl hydrolase n=4 Tax=...	[more]
A0A6N6ZAI7_9BACT	7.100e-17	46.39	Putative unsaturated glucuronyl hydrolase n=1 Tax=...	[more]
UPI00200F5605	2.140e-16	47.37	glycoside hydrolase family 88 protein n=1 Tax=Agar...	[more]
A0A4Y7ZV10_9GAMM	4.240e-16	48.42	Glucuronyl hydrolase n=2 Tax=Psychromonas sp. RZ22...	[more]
A0A6H5KCI0_9PHAE	8.760e-15	48.98	GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012341	Six-hairpin glycosidase-like superfamily	GENE3D	1.50.10.10		coord: 1..97 e-value: 1.6E-15 score: 58.6
IPR008928	Six-hairpin glycosidase superfamily	SUPERFAMILY	48208	Six-hairpin glycosidases	coord: 1..95

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig18696	contig	Ecto-sp13_S_contig18696:32..624 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig18696.5881.1	mRNA_Ecto-sp13_S_contig18696.5881.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig18696 32..624 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig18696.5881.1 ID=prot_Ecto-sp13_S_contig18696.5881.1|Name=mRNA_Ecto-sp13_S_contig18696.5881.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=97bp
DNVPYADFDAPVDSDNPKDSSATAIVTSALFELYELTGESSHLEKAQEFL
SSLLLSSTSFDSSATDGWQAILRNSAAAWGDEAVGSATADYFLLESM

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012341	6hp_glycosidase-like_sf
IPR008928	6-hairpin_glycosidase_sf