prot_Ecto-sp13_S_contig18694.5880.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18694.5880.1
Unique Nameprot_Ecto-sp13_S_contig18694.5880.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length106
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18694.5880.1 vs. uniprot
Match: D7FY58_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY58_ECTSI)

HSP 1 Score: 177 bits (449), Expect = 1.580e-54
Identity = 96/106 (90.57%), Postives = 99/106 (93.40%), Query Frame = 0 
Query:    1 MSDLPNWAKGEDGEPKADLADKLVDEAAGVKPEESADAAAAAATDPAAAGSDHAHEDSGLASRALCFFRFLAVLTVVLALVVIGTNCYIIYDKYTEIKGEPAKVRV 106
            MSDLPNWAKGE GEPKADLADKLVDEAAGVKPEESADAAAAAAT+PAAAGSDHA EDSGLASRALCFFRFLAVLTV+LALVVIGTNCYIIYDKYTEIK     +RV
Sbjct:    1 MSDLPNWAKGEGGEPKADLADKLVDEAAGVKPEESADAAAAAATEPAAAGSDHAREDSGLASRALCFFRFLAVLTVLLALVVIGTNCYIIYDKYTEIKARGILLRV 106
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18694.5880.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FY58_ECTSI1.580e-5490.57Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..66
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 92..106
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 67..91
NoneNo IPR availableTMHMMTMhelixcoord: 68..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18694contigEcto-sp13_S_contig18694:2992..3309 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18694.5880.1mRNA_Ecto-sp13_S_contig18694.5880.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18694 2992..3309 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18694.5880.1 ID=prot_Ecto-sp13_S_contig18694.5880.1|Name=mRNA_Ecto-sp13_S_contig18694.5880.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=106bp
MSDLPNWAKGEDGEPKADLADKLVDEAAGVKPEESADAAAAAATDPAAAG
SDHAHEDSGLASRALCFFRFLAVLTVVLALVVIGTNCYIIYDKYTEIKGE
PAKVRV
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