prot_Ecto-sp13_S_contig18680.5869.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18680.5869.1
Unique Nameprot_Ecto-sp13_S_contig18680.5869.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length153
Homology
BLAST of mRNA_Ecto-sp13_S_contig18680.5869.1 vs. uniprot
Match: A0A6H5JCP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCP2_9PHAE)

HSP 1 Score: 293 bits (751), Expect = 1.850e-96
Identity = 148/152 (97.37%), Postives = 150/152 (98.68%), Query Frame = 0
Query:    1 QVEYVTICVVTAVVTFVLWPVLSRVSVLSHMGTGLDGWLSQAIDTVGLASFAVAATQNGIRRKCHPGTTIVICCITCSGGGILRDVLTSSPVMALSSHAQMYVSTAAFGSGAYLLARKYSKDPLFRICAGFFTVVILRLLACLYDLRLPRMV 152
            QVEYVTICVVTAVVTFVLWPVLSRVSVLSHMGTGLDGWLSQAIDTVGLASFAVAATQNGIRRKCHPGTTIVICCITCSGGGILRDVLTSSPVMALSSHAQMYVSTAA GSGAYLLAR+YSKDPLFRIC GFFTV+ILRLLACLYDLRLPRMV
Sbjct:  279 QVEYVTICVVTAVVTFVLWPVLSRVSVLSHMGTGLDGWLSQAIDTVGLASFAVAATQNGIRRKCHPGTTIVICCITCSGGGILRDVLTSSPVMALSSHAQMYVSTAAIGSGAYLLARRYSKDPLFRICVGFFTVIILRLLACLYDLRLPRMV 430          
BLAST of mRNA_Ecto-sp13_S_contig18680.5869.1 vs. uniprot
Match: D8LLZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLZ7_ECTSI)

HSP 1 Score: 200 bits (509), Expect = 9.280e-63
Identity = 98/103 (95.15%), Postives = 102/103 (99.03%), Query Frame = 0
Query:   38 WLSQAIDTVGLASFAVAATQNGIRRKCHPGTTIVICCITCSGGGILRDVLTSSPVMALSSHAQMYVSTAAFGSGAYLLARKYSKDPLFRICAGFFTVVILRLL 140
            WL +AIDT+GLASFAVAATQNGIRRKCHPGTTIVICCITCSGGGILRDVLTSSPVMALSSHAQMYVSTAAFGSGAYLLAR+YSKDPLFR+CAGFFTVVILRLL
Sbjct:   43 WLVEAIDTIGLASFAVAATQNGIRRKCHPGTTIVICCITCSGGGILRDVLTSSPVMALSSHAQMYVSTAAFGSGAYLLARRYSKDPLFRVCAGFFTVVILRLL 145          
BLAST of mRNA_Ecto-sp13_S_contig18680.5869.1 vs. uniprot
Match: A0A835ZGC7_9STRA (UPF0126 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGC7_9STRA)

HSP 1 Score: 150 bits (379), Expect = 2.540e-42
Identity = 75/151 (49.67%), Postives = 102/151 (67.55%), Query Frame = 0
Query:    1 QVEYVTICVVTAVVTFVLWPVLSRVSVLSHMGTGLDGWLSQAIDTVGLASFAVAATQNGIRRKCHPGTTIVICCITCSGGGILRDVLTSSPVMALSSHAQMYVSTAAFGSGAYLLARKYSKDPLFRICAGFFTVVILRLLACLYDLRLPRM 151
            +VEY+ +C+VT++ TF  WP L  + +LS  G+  DG L + +DT+GL +FAV  TQ+GIRR+ HP  T+VI  ITCS GG+ RDV+T +P+  + SHA++Y +TAA GS AYL+AR    DPL R+ AGF   V  R  A   DLRLP +
Sbjct:  117 EVEYLAMCIVTSIATFYAWPHLRHMPILSASGSSDDGALPRWLDTIGLGAFAVVGTQHGIRRRLHPLATVVIATITCSFGGVTRDVMTKAPIRVMHSHAELYATTAAAGSCAYLIARAAVADPLLRMAAGFGVTVAARFAAWTLDLRLPTL 267          
BLAST of mRNA_Ecto-sp13_S_contig18680.5869.1 vs. uniprot
Match: A0A5J4Z897_PORPP (UPF0126 membrane protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z897_PORPP)

HSP 1 Score: 93.2 bits (230), Expect = 1.380e-19
Identity = 54/147 (36.73%), Postives = 78/147 (53.06%), Query Frame = 0
Query:    3 EYVTICVVTAVVTFVLWPVLSRVSVLSHMGTGLDGWLSQAIDTVGLASFAVAATQNGIRRKCHPGTTIVICCITCSGGGILRDVLTSSPVMALSSHAQMYVSTAAFGSGAYLLARKYSKDPLFRICAGFFTVVILRLLACLYDLRLP 149
            EY+ I V T+++ F  WP +S       +G   D +    ID+  L +F+   T NGIR   +P   +V   +TC+ GG++RD     PV  L S+A++Y +TAA GS AY+ AR      + RI  G  +  I+RL A  Y  RLP
Sbjct:  196 EYIAIAVATSLLAFFFWPDVS-----DALGITEDEYFINVIDSWSLGAFSCIGTMNGIRAGYNPLIVLVCAVVTCTFGGVVRDTFLKRPVRVLHSYAEIYATTAAVGSIAYMAARAMQLPLVLRISLGLSSTFIMRLWAMKYGTRLP 337          
BLAST of mRNA_Ecto-sp13_S_contig18680.5869.1 vs. uniprot
Match: A0A0S4JKV7_BODSA (Uncharacterized protein n=2 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4JKV7_BODSA)

HSP 1 Score: 79.3 bits (194), Expect = 4.060e-15
Identity = 40/104 (38.46%), Postives = 58/104 (55.77%), Query Frame = 0
Query:   44 DTVGLASFAVAATQNGIRRKCHPGTTIVICCITCSGGGILRDVLTSSPVMALSSHAQMYVSTAAFGSGAYLLARKYSKDPLFRICAGFFTVVILRLLACLYDLR 147
            DT+G+ +FAV  T   +R       T+V CCITC+GGG++RD L   PV  + +  ++Y   A  G  AYLLAR        R+  G  T + LR+LA  Y+++
Sbjct:  125 DTLGIGAFAVIGTMYAVRMGFGIIITLVCCCITCTGGGVIRDTLVKRPVRVMHNLEEVYAEAAVSGGAAYLLARGAGLPLQVRVLVGAGTTIALRILATKYNIK 228          
BLAST of mRNA_Ecto-sp13_S_contig18680.5869.1 vs. uniprot
Match: K8EPI8_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EPI8_9CHLO)

HSP 1 Score: 66.2 bits (160), Expect = 7.910e-10
Identity = 50/151 (33.11%), Postives = 71/151 (47.02%), Query Frame = 0
Query:    3 EYVTICVVTAVVTFVLWP-VLSR-VSVLSHMGTGLDGWLSQAIDTVGLASFAVAATQNGIRRKCHPGTTIVICCITCSGGGILRDVLTSSPVMALSSHAQMYVSTAAFGSGAYLLARKY--SKDPLFRICAGFFTVVILRLLACLYDLRLP 149
            EY+ + +V +  TF  WP VLS+ V     M T L+ WL    D + L  F +      + R   P   + +  ITC+GGG++RDV    PV  L SHA++Y +TA  G+  Y +   +        R      T V LR  A    L+LP
Sbjct:  270 EYLIVALVASFFTFFFWPKVLSKEVRESKAMETALN-WL----DALSLGGFCIIGANAALVRNLGPLLAVALSAITCTGGGVVRDVFLRQPVRVLHSHAELYGTTAIAGAAVYTVFACWFPGVSHNLRCLLAASTTVFLRWRAWKRGLKLP 415          
BLAST of mRNA_Ecto-sp13_S_contig18680.5869.1 vs. uniprot
Match: A0A7S2EWJ0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EWJ0_TRICV)

HSP 1 Score: 62.4 bits (150), Expect = 1.370e-8
Identity = 34/111 (30.63%), Postives = 53/111 (47.75%), Query Frame = 0
Query:    3 EYVTICVVTAVVTFVLWPVLSRVSVLSHMGTGLDGWLSQAIDTVGLASFAVAATQNGIRRKCHPGTTIVICCITCSGGGILRDVLTSSPVMALSSHAQMYVSTAAFGSGAY 113
            E++ +CV  +  TF+LWP + R      +G      L    D  GL +F+V  TQ G  +   P   ++   ++C+GGGI+RDVL   P   L     +Y +    G+  Y
Sbjct:  155 EFLYVCVAVSASTFLLWPQIER-----RLGWNDSAHLVCLADAFGLGAFSVVGTQKGADKGLPPPLWVLTALVSCTGGGIIRDVLCRRPARVLHPDRTLYATPPVLGAIVY 260          
BLAST of mRNA_Ecto-sp13_S_contig18680.5869.1 vs. uniprot
Match: A0A557RY04_9GAMM (Trimeric intracellular cation channel family protein n=1 Tax=Sedimenticola selenatireducens TaxID=191960 RepID=A0A557RY04_9GAMM)

HSP 1 Score: 60.8 bits (146), Expect = 2.130e-8
Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 0
Query:    5 VTICVVTAVVTFVLWPVL-SRVSVLSHMGTGLDGWLSQAIDTVGLASFAVAATQNGIRRKCHPGTTIVICCITCSGGGILRDVLTSSPVMALSSHAQMYVSTAAFGSGAYLLARKYSKDPLFRICAGFFTVVILRLLACLYDLRLPR 150
            VT+C+V AV+T+ L P+L SR   L  M            D +GLA+F++  T   +     P   + +  ++ + GGI+RDVL S  ++  S   ++YV+TAA G+ +YL+ +      +      F     LR  A ++ L+LPR
Sbjct:   72 VTLCLVAAVLTYFLAPLLASRYRALIWM------------DAIGLATFSITGTSIALSLGSPPLIAVCMGVMSATFGGIIRDVLCSESLVLTSR--ELYVTTAAAGASSYLVLQLAGVGEIIATLGAFAIGFGLRAAAIVFGLKLPR 204          
BLAST of mRNA_Ecto-sp13_S_contig18680.5869.1 vs. uniprot
Match: A0A1Z5KKM8_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KKM8_FISSO)

HSP 1 Score: 61.2 bits (147), Expect = 3.260e-8
Identity = 50/158 (31.65%), Postives = 74/158 (46.84%), Query Frame = 0
Query:    4 YVTICVVTAVVTFVLWPVLSRVSVLSHMGTGLDGW--LSQAI---DTVGLASFAVAATQNGIRRKCHPGTTIVICCITCSGGGILRDVLTSSPVMALSSHAQMYVSTAAFGSGAYLL------ARKYSKDPLFRICAGFFTVVILRLLACLYDLRLPR 150
            ++++C+ T ++T+V+WP L +            GW    +AI   D +GLA+F V  T+ G      P   IVI  I+C+ GGILRD+L + P   L  +  +Y +    GS  Y L      A   S D        F T ++ RL A    +RLP 
Sbjct:  136 FLSLCLFTTLLTYVVWPRLEQ----------NWGWKDCDKAICVADAIGLAAFVVITTEKGNVYNLPPFYWIVIGFISCTFGGILRDILCARPARVLYPNRTLYATPVLLGSAVYTLCKTSRLAHLLSNDQ--TAALTFCTTLVSRLWAFDNPIRLPH 281          
BLAST of mRNA_Ecto-sp13_S_contig18680.5869.1 vs. uniprot
Match: A0A357JG54_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A357JG54_9FLAO)

HSP 1 Score: 60.1 bits (144), Expect = 4.100e-8
Identity = 31/107 (28.97%), Postives = 54/107 (50.47%), Query Frame = 0
Query:   44 DTVGLASFAVAATQNGIRRKCHPGTTIVICCITCSGGGILRDVLTSSPVMALSSHAQMYVSTAAFGSGAYLLARKYSKDPLFRICAGFFTVVILRLLACLYDLRLPR 150
            DT+GL  F +   Q G+    HP   +V+  ++   GG+ RD+LT++  +      ++Y   +  G   YL A  ++     +  A    V+++RL+A  Y LRLP+
Sbjct:   94 DTIGLGVFTLLGVQKGLVFNLHPFVAVVMGMVSAVMGGVTRDILTNNVPLIFKK--EIYAMASLAGGATYLTASYFNLPDNIQFSATIMVVIVIRLIAVKYKLRLPQ 198          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18680.5869.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5JCP2_9PHAE1.850e-9697.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLZ7_ECTSI9.280e-6395.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZGC7_9STRA2.540e-4249.67UPF0126 domain-containing protein n=1 Tax=Tribonem... [more]
A0A5J4Z897_PORPP1.380e-1936.73UPF0126 membrane protein n=1 Tax=Porphyridium purp... [more]
A0A0S4JKV7_BODSA4.060e-1538.46Uncharacterized protein n=2 Tax=Bodo saltans TaxID... [more]
K8EPI8_9CHLO7.910e-1033.11Uncharacterized protein n=1 Tax=Bathycoccus prasin... [more]
A0A7S2EWJ0_TRICV1.370e-830.63Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A557RY04_9GAMM2.130e-831.29Trimeric intracellular cation channel family prote... [more]
A0A1Z5KKM8_FISSO3.260e-831.65Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A357JG54_9FLAO4.100e-828.97Uncharacterized protein n=1 Tax=Flavobacteriaceae ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005115Uncharacterised domain UPF0126PFAMPF03458UPF0126coord: 42..116
e-value: 9.2E-16
score: 57.5
NoneNo IPR availablePANTHERPTHR30506INNER MEMBRANE PROTEINcoord: 2..151
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..116
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 88..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..87
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..56
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 57..67
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..26
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 117..122
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 123..146
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 147..152
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..37
NoneNo IPR availableTMHMMTMhelixcoord: 37..54
NoneNo IPR availableTMHMMTMhelixcoord: 67..84
NoneNo IPR availableTMHMMTMhelixcoord: 99..116
NoneNo IPR availableTMHMMTMhelixcoord: 5..22
NoneNo IPR availableTMHMMTMhelixcoord: 123..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18680contigEcto-sp13_S_contig18680:110..986 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18680.5869.1mRNA_Ecto-sp13_S_contig18680.5869.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18680 110..986 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18680.5869.1 ID=prot_Ecto-sp13_S_contig18680.5869.1|Name=mRNA_Ecto-sp13_S_contig18680.5869.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=153bp
QVEYVTICVVTAVVTFVLWPVLSRVSVLSHMGTGLDGWLSQAIDTVGLAS
FAVAATQNGIRRKCHPGTTIVICCITCSGGGILRDVLTSSPVMALSSHAQ
MYVSTAAFGSGAYLLARKYSKDPLFRICAGFFTVVILRLLACLYDLRLPR
MV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005115UPF0126