prot_Ecto-sp13_S_contig18677.5865.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18677.5865.1
Unique Nameprot_Ecto-sp13_S_contig18677.5865.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length57
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18677.5865.1 vs. uniprot
Match: A0A6H5KZM5_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZM5_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 4.700e-33
Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 0 
Query:    1 MATTASDIICHSCYEPGHIRRNCPKLKNRAKKKTKPAGATKWCSKHNTTSHSNEECY 57
            MATTASDIICHSCYEPGHIRRNCPK+KNRAKKKTKPAGATKWCSKHNTTSHS+EECY
Sbjct:   99 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEECY 155
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18677.5865.1 vs. uniprot
Match: A0A6H5K783_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K783_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 7.450e-33
Identity = 54/57 (94.74%), Postives = 56/57 (98.25%), Query Frame = 0 
Query:    1 MATTASDIICHSCYEPGHIRRNCPKLKNRAKKKTKPAGATKWCSKHNTTSHSNEECY 57
            MATTASDIICHSCYEPGHIRRNCPK+KNRAKKKTKPAGATKWC KHNTTSHS+EECY
Sbjct:  108 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCFKHNTTSHSDEECY 164
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18677.5865.1 vs. uniprot
Match: A0A6H5JF66_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF66_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 1.240e-32
Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 0 
Query:    1 MATTASDIICHSCYEPGHIRRNCPKLKNRAKKKTKPAGATKWCSKHNTTSHSNEECY 57
            MATTASDIICHSCYEPGHIRRNCPK+KNRAKKKTKPAGATKWCSKHNTTSHS+EECY
Sbjct:  236 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEECY 292
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18677.5865.1 vs. uniprot
Match: A0A6H5LLS9_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLS9_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 1.740e-32
Identity = 54/57 (94.74%), Postives = 56/57 (98.25%), Query Frame = 0 
Query:    1 MATTASDIICHSCYEPGHIRRNCPKLKNRAKKKTKPAGATKWCSKHNTTSHSNEECY 57
            MATTASDIICHSCYEPGHIRRNCPK+KNRAKKKTKPAG TKWCSKHNTTSHS+EECY
Sbjct:  122 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGGTKWCSKHNTTSHSDEECY 178
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18677.5865.1 vs. uniprot
Match: A0A6H5KP59_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP59_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 2.790e-32
Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 0 
Query:    1 MATTASDIICHSCYEPGHIRRNCPKLKNRAKKKTKPAGATKWCSKHNTTSHSNEECY 57
            MATTASDIICHSCYEPGHIRRNCPK+KNRAKKKTKPAGATKWCSKHNTTSHS+EECY
Sbjct:   47 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEECY 103
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18677.5865.1 vs. uniprot
Match: A0A6H5K055_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K055_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 7.190e-32
Identity = 50/57 (87.72%), Postives = 55/57 (96.49%), Query Frame = 0 
Query:    1 MATTASDIICHSCYEPGHIRRNCPKLKNRAKKKTKPAGATKWCSKHNTTSHSNEECY 57
            MATT SDI+CHSCYEPGHIRRNCPK+KNRAK+KT+PAGATKWCSKH TTSHS+EECY
Sbjct:    1 MATTTSDIMCHSCYEPGHIRRNCPKIKNRAKQKTRPAGATKWCSKHYTTSHSDEECY 57
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18677.5865.1 vs. uniprot
Match: A0A6H5JZ53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ53_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 8.530e-32
Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 0 
Query:    1 MATTASDIICHSCYEPGHIRRNCPKLKNRAKKKTKPAGATKWCSKHNTTSHSNEECY 57
            MATTASDIICHSCYEPGHIRRNCPK+KNRAKKKTKPAGATKWCSKHNTTSHS+EECY
Sbjct:   99 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEECY 155
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18677.5865.1 vs. uniprot
Match: A0A6H5KXR7_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXR7_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 8.540e-32
Identity = 54/57 (94.74%), Postives = 56/57 (98.25%), Query Frame = 0 
Query:    1 MATTASDIICHSCYEPGHIRRNCPKLKNRAKKKTKPAGATKWCSKHNTTSHSNEECY 57
            MATTASDIICHSCYEPGHIRRNCPK+KNRAKKKTKPAGATKWC KHNTTSHS+EECY
Sbjct:  195 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCCKHNTTSHSDEECY 251
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18677.5865.1 vs. uniprot
Match: A0A6H5L580_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L580_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 1.740e-31
Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 0 
Query:    1 MATTASDIICHSCYEPGHIRRNCPKLKNRAKKKTKPAGATKWCSKHNTTSHSNEECY 57
            MATTASDIICHSCYEPGHIRRNCPK+KNRAKKKTKPAGATKWCSKHNTTSHS+EECY
Sbjct:  254 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEECY 310
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18677.5865.1 vs. uniprot
Match: A0A6H5KMG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMG5_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 1.840e-31
Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 0 
Query:    1 MATTASDIICHSCYEPGHIRRNCPKLKNRAKKKTKPAGATKWCSKHNTTSHSNEECY 57
            MATTASDIICHSCYEPGHIRRNCPK+KNRAKKKTKPAGATKWCSKHNTTSHS+EECY
Sbjct:   29 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEECY 85
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18677.5865.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZM5_9PHAE4.700e-3396.49CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K783_9PHAE7.450e-3394.74CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JF66_9PHAE1.240e-3296.49CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5LLS9_9PHAE1.740e-3294.74CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KP59_9PHAE2.790e-3296.49CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K055_9PHAE7.190e-3287.72CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JZ53_9PHAE8.530e-3296.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXR7_9PHAE8.540e-3294.74CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L580_9PHAE1.740e-3196.49CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KMG5_9PHAE1.840e-3196.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D4.10.60.10coord: 3..55
e-value: 1.2E-6
score: 30.6
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 9..25
e-value: 1.4E-4
score: 21.7
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 10..25
score: 9.373
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 5..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18677contigEcto-sp13_S_contig18677:53..223 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18677.5865.1mRNA_Ecto-sp13_S_contig18677.5865.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18677 53..223 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18677.5865.1 ID=prot_Ecto-sp13_S_contig18677.5865.1|Name=mRNA_Ecto-sp13_S_contig18677.5865.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=57bp
MATTASDIICHSCYEPGHIRRNCPKLKNRAKKKTKPAGATKWCSKHNTTS
HSNEECY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf