mRNA_Ecto-sp13_S_contig18651.5854.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18651.5854.1 vs. uniprot
Match: D7FRT2_ECTSI (EsV-1-164 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT2_ECTSI) HSP 1 Score: 398 bits (1022), Expect = 2.330e-132 Identity = 201/213 (94.37%), Postives = 204/213 (95.77%), Query Frame = 1
Query: 1 TSLQALLDDASPGDTIYIPEGTHDVSLTTVVDGTEDEPITIRNELGTSAEDCVLRGDDRARVLEVLHNHYIIQGFTIDGDDGSGDYKEQLLYIEGSRDPSEVDGVDSSITGVHVQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGIEDFQQDSDGSNGEGVYIGTALNQIDEKNGDDVVDECTGIVVMNNEIDTQACPRRQPGSEGVDIKE 639
+ LQALLDDASPGDTIYIP GTHDVSLTTVVDGTEDEPITIRNELGTSAEDCVLRGDDRARVLEVLHNHYIIQGFTIDGDDGSGDYKEQLLYIEGSRDPSEVDGVDSSITGV+VQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGI+DFQQDSDGSNGEGVYIGTALNQIDEKNGDDVVDECTGIVVMNNEIDTQ GSEGVDIKE
Sbjct: 59 SDLQALLDDASPGDTIYIPAGTHDVSLTTVVDGTEDEPITIRNELGTSAEDCVLRGDDRARVLEVLHNHYIIQGFTIDGDDGSGDYKEQLLYIEGSRDPSEVDGVDSSITGVNVQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGIQDFQQDSDGSNGEGVYIGTALNQIDEKNGDDVVDECTGIVVMNNEIDTQ-------GSEGVDIKE 264
BLAST of mRNA_Ecto-sp13_S_contig18651.5854.1 vs. uniprot
Match: A0A1F7IHP9_9BACT (Uncharacterized protein n=1 Tax=Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_35_13 TaxID=1802055 RepID=A0A1F7IHP9_9BACT) HSP 1 Score: 169 bits (428), Expect = 6.070e-47 Identity = 98/248 (39.52%), Postives = 143/248 (57.66%), Query Frame = 1
Query: 4 SLQALLDDASPGDTIYIPEGTHDVSLTTVVDGTEDEPITIRNELGTSAEDCVLRGDDRARVLEVLHNHYIIQGFTIDGDDGSGD----YKEQLLYIEGSRDPSEVDGVDSSITGVHVQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGIEDFQQDSDGSNGEGVYIGTALNQI-DEKNGDDVVDECTGIVVMNNEIDTQACPRRQPGSEGVDIKEGSYGNVVYGNTIRGQMDEETGGKQPASSKNV 732
S+Q +D+A PG+TI + G ++ + GT ++PITI T ++D V++G +ARV+E+ H+H I+ FT+DG G Y+++L+Y+ G +TG+ + M +KNAG EC+R+RYFA N + N I CGI DF+ G NGEG+YIGTA Q+ D KN +DE ++ +N I+TQ G+E VDIKEGS GN+V N GQ D+E+ G SKN+
Sbjct: 84 SIQKAIDNAQPGETIKLLPGVYNQDFVSKRSGTAEKPITI-----TGSKDVVVKGGGKARVIEINHDHIILSKFTVDGLHGDSGRVEGYRDKLIYVLGK-------SARKGVTGLKILSMNIKNAGGECVRLRYFAQNNEIAYNSINRCGIVDFEFKGGGKNGEGIYIGTAPEQLKDGKNPTSDIDESNNNLIHHNTINTQ-------GNECVDIKEGSSGNIVEYNNCTGQKDKESAGLDSRGSKNI 312
BLAST of mRNA_Ecto-sp13_S_contig18651.5854.1 vs. uniprot
Match: A0A6H5JYT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYT7_9PHAE) HSP 1 Score: 168 bits (426), Expect = 2.540e-44 Identity = 103/251 (41.04%), Postives = 149/251 (59.36%), Query Frame = 1
Query: 1 TSLQALLDDASPGDTIYIPEGTHDVSLTTVVDGTEDEPITIRNELGTS-AEDCVLRGDDRA-RVLEVLHNHYIIQGFTIDGD-------DGSGD-----YKEQLLYIEGSRDPSEVDG-VDSSITGVHVQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGIEDFQQDSDGSNGEGVYIGTALNQID-EKNGDDVVDECTGIVVMNNEIDTQACPRRQPGSEGVDIKEGSYGNVVYGNTIRGQMDEETGG 705
T+ Q LD +PGD I + G + L T DGT D PITIR GT E+ VLRG + RVLE+ H++YI++ FT++GD D D +++ L+Y +R+P+E DG S+I G+ ++ M + NAG EC+R+R T V N I CGI DF++D DG NGEGVY+GT+ +Q D + N DDV D C G ++ +N I T+ G+EG+D+KEGS ++ N + Q D+++GG
Sbjct: 36 TAFQDALDVVNPGDVIELGNGDYWEDLKTRTDGTVDMPITIRGAGGTDDRENVVLRGAGTSTRVLEIKHDYYIVEDFTVNGDAEDDPDRDADSDSPEDMWRDVLIYAVANREPTERDGGYVSAIDGLVIRNMAVTNAGGECIRLRDHVTYAEVYSNHITDCGIFDFREDGDGKNGEGVYVGTSSSQWDNDNNWDDVPDACMGNIIRDNYIRTR-------GNEGIDVKEGSVDTLIEYNEVYMQYDDDSGG 279
BLAST of mRNA_Ecto-sp13_S_contig18651.5854.1 vs. uniprot
Match: A0A6H5L8H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8H5_9PHAE) HSP 1 Score: 167 bits (424), Expect = 4.540e-44 Identity = 103/251 (41.04%), Postives = 149/251 (59.36%), Query Frame = 1
Query: 1 TSLQALLDDASPGDTIYIPEGTHDVSLTTVVDGTEDEPITIRNELGTS-AEDCVLRGDDRA-RVLEVLHNHYIIQGFTIDGD-------DGSGD-----YKEQLLYIEGSRDPSEVDG-VDSSITGVHVQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGIEDFQQDSDGSNGEGVYIGTALNQID-EKNGDDVVDECTGIVVMNNEIDTQACPRRQPGSEGVDIKEGSYGNVVYGNTIRGQMDEETGG 705
T+ Q LD +PGD I + G + L T DGT D PITIR GT E+ VLRG + RVLE+ H++YI++ FT++GD D D +++ L+Y +R+P+E DG S+I G+ ++ M + NAG EC+R+R T V N I CGI D+++D DG NGEGVY+GT+ NQ D + N DDV D C G ++ +N I T+ G+EG+D+KEGS ++ N + Q D+++GG
Sbjct: 37 TAFQDALDVVNPGDVIELGNGDYWEDLKTRTDGTVDMPITIRGAGGTDDRENVVLRGAGTSTRVLEIKHDYYIVEDFTVNGDAEDDPDRDADSDSPEDMWRDVLIYAVANREPTERDGGYVSAIDGLVIRNMAVTNAGGECIRLRDHVTYAEVYSNYIIDCGIYDYREDGDGKNGEGVYVGTSSNQWDSDNNWDDVPDVCMGNIIRDNYIRTR-------GNEGIDVKEGSVDTLIEYNEVYMQYDDDSGG 280
BLAST of mRNA_Ecto-sp13_S_contig18651.5854.1 vs. uniprot
Match: A0A1F7I8U6_9BACT (Uncharacterized protein n=1 Tax=Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_37_12 TaxID=1802056 RepID=A0A1F7I8U6_9BACT) HSP 1 Score: 157 bits (398), Expect = 2.330e-43 Identity = 95/247 (38.46%), Postives = 136/247 (55.06%), Query Frame = 1
Query: 7 LQALLDDASPGDTIYIPEGTHDVSLTTVVDGTEDEPITIRNELGTSAEDCVLRGDDRARVLEVLHNHYIIQGFTIDGDDGSGD----YKEQLLYIEGSRDPSEVDGVDSSITGVHVQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGIEDFQQDSDGSNGEGVYIGTALNQI-DEKNGDDVVDECTGIVVMNNEIDTQACPRRQPGSEGVDIKEGSYGNVVYGNTIRGQMDEETGGKQPASSKNV 732
+Q +D A PGDTI + G + + T GT + PITI + +D V++G +AR+ E+ H+ + GFTIDG G D Y+++L+Y G + +TG+ + M +KNAG EC+R+RYFA + N I CG+ DF G NGEGVYIGTA Q+ D KN DE ++ +N I+T G+E VDIKEGS+GN+V N GQ D+E+GG ++N+
Sbjct: 1 MQKAVDRAQPGDTINLLPGVYFQDVVTKRSGTPENPITI-----SGTKDAVVKGGGKARIFEINHDFISLSGFTIDGQYGELDNKNGYRDKLIYALGKEERK-------GVTGLKIMSMSIKNAGGECIRLRYFAQRNEIAYNTIIRCGVSDFSFSGGGKNGEGVYIGTAPEQLKDGKNPTKDRDESNNNLIHHNTINTL-------GNECVDIKEGSWGNIVEYNNCTGQKDKESGGMDSRGNRNI 228
BLAST of mRNA_Ecto-sp13_S_contig18651.5854.1 vs. uniprot
Match: A0A0G0APH1_9BACT (Beta_helix domain-containing protein n=2 Tax=Candidatus Moranbacteria TaxID=1752737 RepID=A0A0G0APH1_9BACT) HSP 1 Score: 157 bits (396), Expect = 4.460e-42 Identity = 96/248 (38.71%), Postives = 140/248 (56.45%), Query Frame = 1
Query: 4 SLQALLDDASPGDTIYIPEGTHDVSLTTVVDGTEDEPITIRNELGTSAEDCVLRGDDRARVLEVLHNHYIIQGFTIDGDDGSGD----YKEQLLYIEGSRDPSEVDGVDSSITGVHVQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGIEDFQQDSDGSNGEGVYIGTALNQI-DEKNGDDVVDECTGIVVMNNEIDTQACPRRQPGSEGVDIKEGSYGNVVYGNTIRGQMDEETGGKQPASSKNV 732
++Q +D A G+TI + EG + + +G D PI I+ GT +D +++G RV+E+ H++ I+ GFT+DG GS D Y+++L+Y+ G + +TG+ ++ M +KNAG EC+R+RYFAT + N I CG+EDF+ D DG NGEG+Y+GTA Q+ D KN D+ + +N IDTQ G+E VDIKE S GN+V N GQ D E+ G S N
Sbjct: 100 TIQKAIDLAQAGETINLSEGIYLQDFVSKRNGKSDAPIVIK---GT--KDSIIKGGGNGRVIEINHDYIILDGFTVDGFYGSSDKAESYRDKLIYVLGKEKKN-------GVTGLRIKNMNIKNAGGECIRLRYFATKNEIVNNLIENCGVEDFKFDGDGKNGEGIYVGTAPEQLKDGKNPTQDPDQSNENWIHDNVIDTQ-------GNECVDIKEASSGNIVEKNKCTGQKDPESAGLDARGSGNT 328
BLAST of mRNA_Ecto-sp13_S_contig18651.5854.1 vs. uniprot
Match: A0A0G0X4X9_9BACT (Secreted protein n=1 Tax=Candidatus Daviesbacteria bacterium GW2011_GWA2_40_9 TaxID=1618424 RepID=A0A0G0X4X9_9BACT) HSP 1 Score: 156 bits (395), Expect = 8.910e-42 Identity = 94/248 (37.90%), Postives = 137/248 (55.24%), Query Frame = 1
Query: 4 SLQALLDDASPGDTIYIPEGTHDVSLTTVVDGTEDEPITIRNELGTSAEDCVLRGDDRARVLEVLHNHYIIQGFTIDGDDGSGD----YKEQLLYIEGSRDPSEVDGVDSSITGVHVQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGIEDFQQDSDGSNGEGVYIGTALNQI-DEKNGDDVVDECTGIVVMNNEIDTQACPRRQPGSEGVDIKEGSYGNVVYGNTIRGQMDEETGGKQPASSKNV 732
++Q +D A G+TI + GT+ + T +GT D+PI I + ++ V++G + R+ E+ H+ ++GFTIDG GS Y+++LLY++G S +TG+ V GM LKNAG EC+R+RYFA N + N I CG+ DF+ + G NGEG+YIGTA Q+ D KN D+ G + +N IDTQ G+E VDIKE + N++ N GQ D +GG N
Sbjct: 118 TIQKAVDLAQGGETIALAPGTYSQDIITKRNGTSDKPIII-----SGPKEAVIKGGGKGRIFEINHDSITLRGFTIDGLFGSSSSSSGYRDKLLYVQGKE-------TKSGVTGLKVLGMTLKNAGGECIRLRYFAQNNEIAGNTITNCGVYDFKFNGGGKNGEGIYIGTAPEQLGDGKNPTSDPDQSNGNFIHDNTIDTQ-------GNECVDIKEAASANMMENNKCTGQKDSNSGGMDSRGEGNT 346
BLAST of mRNA_Ecto-sp13_S_contig18651.5854.1 vs. uniprot
Match: A0A0G1XWI5_9BACT (Beta_helix domain-containing protein n=3 Tax=Candidatus Moranbacteria TaxID=1752737 RepID=A0A0G1XWI5_9BACT) HSP 1 Score: 154 bits (389), Expect = 3.040e-41 Identity = 96/248 (38.71%), Postives = 136/248 (54.84%), Query Frame = 1
Query: 4 SLQALLDDASPGDTIYIPEGTHDVSLTTVVDGTEDEPITIRNELGTSAEDCVLRGDDRARVLEVLHNHYIIQGFTIDGDDGSGD----YKEQLLYIEGSRDPSEVDGVDSSITGVHVQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGIEDFQQDSDGSNGEGVYIGTALNQIDE-KNGDDVVDECTGIVVMNNEIDTQACPRRQPGSEGVDIKEGSYGNVVYGNTIRGQMDEETGGKQPASSKNV 732
S+Q + A PG I++ +GT+ ++ + DGT PI I T + +++G +RV+E+ H+ ++ FT+DG GS D ++++L+Y++G D +TG+ V M LKNAG EC+R+RYFA + N I CG DF D G NGEG+YIGTA Q D+ KN D D G V N IDTQ G+E VD+KEGS GN+V N GQ D E+GG + N+
Sbjct: 79 SIQKAIYLAGPGSAIHLADGTYMQNIVSKRDGTAKNPIRI-----TGSPSSIVQGGKISRVIEINHSFITLENFTVDGLVGSPDEKSGFRDKLIYVQGKGD-------GKGVTGLKVLKMSLKNAGGECVRLRYFAQKNEIADNTITGCGAYDFLLDGKGKNGEGIYIGTAPEQTDDGKNPTDERDHSNGNWVHGNTIDTQ-------GNECVDVKEGSSGNLVENNVCTGQKDSESGGLDSRGNGNI 307
BLAST of mRNA_Ecto-sp13_S_contig18651.5854.1 vs. uniprot
Match: A0A1F6HQF6_9BACT (DUF1565 domain-containing protein n=1 Tax=Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_40_10 TaxID=1798593 RepID=A0A1F6HQF6_9BACT) HSP 1 Score: 151 bits (381), Expect = 1.760e-40 Identity = 93/248 (37.50%), Postives = 137/248 (55.24%), Query Frame = 1
Query: 4 SLQALLDDASPGDTIYIPEGTHDVSLTTVVDGTEDEPITIRNELGTSAEDCVLRGDDRARVLEVLHNHYIIQGFTIDGDDGS----GDYKEQLLYIEGSRDPSEVDGVDSSITGVHVQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGIEDFQQDSDGSNGEGVYIGTALNQI-DEKNGDDVVDECTGIVVMNNEIDTQACPRRQPGSEGVDIKEGSYGNVVYGNTIRGQMDEETGGKQPASSKNV 732
++Q +D A PGD+I + G + + T +GT+D PI IR +++ VL+G+ R+ E+ HN+ + GF+IDG G ++++LLY++G + +TG+ VQ M KNAG EC+R+RYFA N + + I CG+ F DG NGEG+YIGTA Q+ D +N D + +N+I+TQ G+E VDIKEGS N+V N GQ D E+GG + NV
Sbjct: 34 TIQKAVDKALPGDSITLASGVYRQDVITKRNGTQDLPIIIRG-----SKNAVLKGNKNTRIFEINHNYITLDGFSIDGLYGDLNRRSGFRDKLLYVQGKE-------AKNGVTGLKVQNMTFKNAGGECIRLRYFAHNNEISNSTISNCGVYYFVFKEDGKNGEGIYIGTAPEQLRDGRNPTKDSDNSMDNWIHHNKINTQ-------GNECVDIKEGSTANIVEFNDCTGQKDIESGGLDSRGNNNV 262
BLAST of mRNA_Ecto-sp13_S_contig18651.5854.1 vs. uniprot
Match: A0A0G0AZ49_9BACT (Secreted protein n=1 Tax=Parcubacteria group bacterium GW2011_GWC2_32_10 TaxID=1618918 RepID=A0A0G0AZ49_9BACT) HSP 1 Score: 152 bits (385), Expect = 2.400e-39 Identity = 93/247 (37.65%), Postives = 138/247 (55.87%), Query Frame = 1
Query: 4 SLQALLDDASPGDTIYIPEGTHDVSLTTVVDGTEDEPITIRNELGTSAEDCVLRGDDRARVLEVLHNHYIIQGFTIDGDDGSGD----YKEQLLYIEGSRDPSEVDGVDSSITGVHVQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGIEDFQQDSDGSNGEGVYIGTALNQIDEKNGDDVVDECTGIVVMNNEIDTQACPRRQPGSEGVDIKEGSYGNVVYGNTIRGQMDEETGGKQPASSKNV 732
++Q ++ A PG TIY+ G + + + +G+ PI+I LG +D +++G +RV+E+ H++ II GFT+DG G Y++ L+Y G + +TG+ + M +KN+G EC+R++YFA N + N I CGI DF+ + G NGEG+YIGTA Q+ KN +D+ + NN I T G+EGVDIKEGS GN+V N IRGQ D E+GG N+
Sbjct: 69 TIQKAVNLAQPGQTIYLLPGQYFQDIVSARNGSLQSPISI---LGR--QDAIIKGAGASRVIEINHDNIIISGFTLDGLYGDASKASGYRDMLIYAVGKESKN-------GVTGLKITDMNIKNSGGECIRLKYFAQNNEIANNVIQNCGIYDFKFSAGGKNGEGIYIGTAPEQL-SKNPTLDIDKSNNNYIHNNSIQTN-------GNEGVDIKEGSTGNIVEYNIIRGQKDSESGGLDSRGDSNI 295 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18651.5854.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18651.5854.1 >prot_Ecto-sp13_S_contig18651.5854.1 ID=prot_Ecto-sp13_S_contig18651.5854.1|Name=mRNA_Ecto-sp13_S_contig18651.5854.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=244bp TSLQALLDDASPGDTIYIPEGTHDVSLTTVVDGTEDEPITIRNELGTSAEback to top mRNA from alignment at Ecto-sp13_S_contig18651:118..3435+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18651.5854.1 ID=mRNA_Ecto-sp13_S_contig18651.5854.1|Name=mRNA_Ecto-sp13_S_contig18651.5854.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3318bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18651:118..3435+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18651:118..3435+ >mRNA_Ecto-sp13_S_contig18651.5854.1 ID=mRNA_Ecto-sp13_S_contig18651.5854.1|Name=mRNA_Ecto-sp13_S_contig18651.5854.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=732bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18651:118..3435+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |