mRNA_Ecto-sp13_S_contig18651.5854.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig18651.5854.1
Unique NamemRNA_Ecto-sp13_S_contig18651.5854.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig18651.5854.1 vs. uniprot
Match: D7FRT2_ECTSI (EsV-1-164 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT2_ECTSI)

HSP 1 Score: 398 bits (1022), Expect = 2.330e-132
Identity = 201/213 (94.37%), Postives = 204/213 (95.77%), Query Frame = 1
Query:    1 TSLQALLDDASPGDTIYIPEGTHDVSLTTVVDGTEDEPITIRNELGTSAEDCVLRGDDRARVLEVLHNHYIIQGFTIDGDDGSGDYKEQLLYIEGSRDPSEVDGVDSSITGVHVQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGIEDFQQDSDGSNGEGVYIGTALNQIDEKNGDDVVDECTGIVVMNNEIDTQACPRRQPGSEGVDIKE 639
            + LQALLDDASPGDTIYIP GTHDVSLTTVVDGTEDEPITIRNELGTSAEDCVLRGDDRARVLEVLHNHYIIQGFTIDGDDGSGDYKEQLLYIEGSRDPSEVDGVDSSITGV+VQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGI+DFQQDSDGSNGEGVYIGTALNQIDEKNGDDVVDECTGIVVMNNEIDTQ       GSEGVDIKE
Sbjct:   59 SDLQALLDDASPGDTIYIPAGTHDVSLTTVVDGTEDEPITIRNELGTSAEDCVLRGDDRARVLEVLHNHYIIQGFTIDGDDGSGDYKEQLLYIEGSRDPSEVDGVDSSITGVNVQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGIQDFQQDSDGSNGEGVYIGTALNQIDEKNGDDVVDECTGIVVMNNEIDTQ-------GSEGVDIKE 264          
BLAST of mRNA_Ecto-sp13_S_contig18651.5854.1 vs. uniprot
Match: A0A1F7IHP9_9BACT (Uncharacterized protein n=1 Tax=Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_35_13 TaxID=1802055 RepID=A0A1F7IHP9_9BACT)

HSP 1 Score: 169 bits (428), Expect = 6.070e-47
Identity = 98/248 (39.52%), Postives = 143/248 (57.66%), Query Frame = 1
Query:    4 SLQALLDDASPGDTIYIPEGTHDVSLTTVVDGTEDEPITIRNELGTSAEDCVLRGDDRARVLEVLHNHYIIQGFTIDGDDGSGD----YKEQLLYIEGSRDPSEVDGVDSSITGVHVQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGIEDFQQDSDGSNGEGVYIGTALNQI-DEKNGDDVVDECTGIVVMNNEIDTQACPRRQPGSEGVDIKEGSYGNVVYGNTIRGQMDEETGGKQPASSKNV 732
            S+Q  +D+A PG+TI +  G ++    +   GT ++PITI     T ++D V++G  +ARV+E+ H+H I+  FT+DG  G       Y+++L+Y+ G             +TG+ +  M +KNAG EC+R+RYFA N  +  N I  CGI DF+    G NGEG+YIGTA  Q+ D KN    +DE    ++ +N I+TQ       G+E VDIKEGS GN+V  N   GQ D+E+ G     SKN+
Sbjct:   84 SIQKAIDNAQPGETIKLLPGVYNQDFVSKRSGTAEKPITI-----TGSKDVVVKGGGKARVIEINHDHIILSKFTVDGLHGDSGRVEGYRDKLIYVLGK-------SARKGVTGLKILSMNIKNAGGECVRLRYFAQNNEIAYNSINRCGIVDFEFKGGGKNGEGIYIGTAPEQLKDGKNPTSDIDESNNNLIHHNTINTQ-------GNECVDIKEGSSGNIVEYNNCTGQKDKESAGLDSRGSKNI 312          
BLAST of mRNA_Ecto-sp13_S_contig18651.5854.1 vs. uniprot
Match: A0A6H5JYT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYT7_9PHAE)

HSP 1 Score: 168 bits (426), Expect = 2.540e-44
Identity = 103/251 (41.04%), Postives = 149/251 (59.36%), Query Frame = 1
Query:    1 TSLQALLDDASPGDTIYIPEGTHDVSLTTVVDGTEDEPITIRNELGTS-AEDCVLRGDDRA-RVLEVLHNHYIIQGFTIDGD-------DGSGD-----YKEQLLYIEGSRDPSEVDG-VDSSITGVHVQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGIEDFQQDSDGSNGEGVYIGTALNQID-EKNGDDVVDECTGIVVMNNEIDTQACPRRQPGSEGVDIKEGSYGNVVYGNTIRGQMDEETGG 705
            T+ Q  LD  +PGD I +  G +   L T  DGT D PITIR   GT   E+ VLRG   + RVLE+ H++YI++ FT++GD       D   D     +++ L+Y   +R+P+E DG   S+I G+ ++ M + NAG EC+R+R   T   V  N I  CGI DF++D DG NGEGVY+GT+ +Q D + N DDV D C G ++ +N I T+       G+EG+D+KEGS   ++  N +  Q D+++GG
Sbjct:   36 TAFQDALDVVNPGDVIELGNGDYWEDLKTRTDGTVDMPITIRGAGGTDDRENVVLRGAGTSTRVLEIKHDYYIVEDFTVNGDAEDDPDRDADSDSPEDMWRDVLIYAVANREPTERDGGYVSAIDGLVIRNMAVTNAGGECIRLRDHVTYAEVYSNHITDCGIFDFREDGDGKNGEGVYVGTSSSQWDNDNNWDDVPDACMGNIIRDNYIRTR-------GNEGIDVKEGSVDTLIEYNEVYMQYDDDSGG 279          
BLAST of mRNA_Ecto-sp13_S_contig18651.5854.1 vs. uniprot
Match: A0A6H5L8H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8H5_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 4.540e-44
Identity = 103/251 (41.04%), Postives = 149/251 (59.36%), Query Frame = 1
Query:    1 TSLQALLDDASPGDTIYIPEGTHDVSLTTVVDGTEDEPITIRNELGTS-AEDCVLRGDDRA-RVLEVLHNHYIIQGFTIDGD-------DGSGD-----YKEQLLYIEGSRDPSEVDG-VDSSITGVHVQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGIEDFQQDSDGSNGEGVYIGTALNQID-EKNGDDVVDECTGIVVMNNEIDTQACPRRQPGSEGVDIKEGSYGNVVYGNTIRGQMDEETGG 705
            T+ Q  LD  +PGD I +  G +   L T  DGT D PITIR   GT   E+ VLRG   + RVLE+ H++YI++ FT++GD       D   D     +++ L+Y   +R+P+E DG   S+I G+ ++ M + NAG EC+R+R   T   V  N I  CGI D+++D DG NGEGVY+GT+ NQ D + N DDV D C G ++ +N I T+       G+EG+D+KEGS   ++  N +  Q D+++GG
Sbjct:   37 TAFQDALDVVNPGDVIELGNGDYWEDLKTRTDGTVDMPITIRGAGGTDDRENVVLRGAGTSTRVLEIKHDYYIVEDFTVNGDAEDDPDRDADSDSPEDMWRDVLIYAVANREPTERDGGYVSAIDGLVIRNMAVTNAGGECIRLRDHVTYAEVYSNYIIDCGIYDYREDGDGKNGEGVYVGTSSNQWDSDNNWDDVPDVCMGNIIRDNYIRTR-------GNEGIDVKEGSVDTLIEYNEVYMQYDDDSGG 280          
BLAST of mRNA_Ecto-sp13_S_contig18651.5854.1 vs. uniprot
Match: A0A1F7I8U6_9BACT (Uncharacterized protein n=1 Tax=Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_37_12 TaxID=1802056 RepID=A0A1F7I8U6_9BACT)

HSP 1 Score: 157 bits (398), Expect = 2.330e-43
Identity = 95/247 (38.46%), Postives = 136/247 (55.06%), Query Frame = 1
Query:    7 LQALLDDASPGDTIYIPEGTHDVSLTTVVDGTEDEPITIRNELGTSAEDCVLRGDDRARVLEVLHNHYIIQGFTIDGDDGSGD----YKEQLLYIEGSRDPSEVDGVDSSITGVHVQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGIEDFQQDSDGSNGEGVYIGTALNQI-DEKNGDDVVDECTGIVVMNNEIDTQACPRRQPGSEGVDIKEGSYGNVVYGNTIRGQMDEETGGKQPASSKNV 732
            +Q  +D A PGDTI +  G +   + T   GT + PITI     +  +D V++G  +AR+ E+ H+   + GFTIDG  G  D    Y+++L+Y  G  +          +TG+ +  M +KNAG EC+R+RYFA    +  N I  CG+ DF     G NGEGVYIGTA  Q+ D KN     DE    ++ +N I+T        G+E VDIKEGS+GN+V  N   GQ D+E+GG     ++N+
Sbjct:    1 MQKAVDRAQPGDTINLLPGVYFQDVVTKRSGTPENPITI-----SGTKDAVVKGGGKARIFEINHDFISLSGFTIDGQYGELDNKNGYRDKLIYALGKEERK-------GVTGLKIMSMSIKNAGGECIRLRYFAQRNEIAYNTIIRCGVSDFSFSGGGKNGEGVYIGTAPEQLKDGKNPTKDRDESNNNLIHHNTINTL-------GNECVDIKEGSWGNIVEYNNCTGQKDKESGGMDSRGNRNI 228          
BLAST of mRNA_Ecto-sp13_S_contig18651.5854.1 vs. uniprot
Match: A0A0G0APH1_9BACT (Beta_helix domain-containing protein n=2 Tax=Candidatus Moranbacteria TaxID=1752737 RepID=A0A0G0APH1_9BACT)

HSP 1 Score: 157 bits (396), Expect = 4.460e-42
Identity = 96/248 (38.71%), Postives = 140/248 (56.45%), Query Frame = 1
Query:    4 SLQALLDDASPGDTIYIPEGTHDVSLTTVVDGTEDEPITIRNELGTSAEDCVLRGDDRARVLEVLHNHYIIQGFTIDGDDGSGD----YKEQLLYIEGSRDPSEVDGVDSSITGVHVQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGIEDFQQDSDGSNGEGVYIGTALNQI-DEKNGDDVVDECTGIVVMNNEIDTQACPRRQPGSEGVDIKEGSYGNVVYGNTIRGQMDEETGGKQPASSKNV 732
            ++Q  +D A  G+TI + EG +     +  +G  D PI I+   GT  +D +++G    RV+E+ H++ I+ GFT+DG  GS D    Y+++L+Y+ G    +        +TG+ ++ M +KNAG EC+R+RYFAT   +  N I  CG+EDF+ D DG NGEG+Y+GTA  Q+ D KN     D+     + +N IDTQ       G+E VDIKE S GN+V  N   GQ D E+ G     S N 
Sbjct:  100 TIQKAIDLAQAGETINLSEGIYLQDFVSKRNGKSDAPIVIK---GT--KDSIIKGGGNGRVIEINHDYIILDGFTVDGFYGSSDKAESYRDKLIYVLGKEKKN-------GVTGLRIKNMNIKNAGGECIRLRYFATKNEIVNNLIENCGVEDFKFDGDGKNGEGIYVGTAPEQLKDGKNPTQDPDQSNENWIHDNVIDTQ-------GNECVDIKEASSGNIVEKNKCTGQKDPESAGLDARGSGNT 328          
BLAST of mRNA_Ecto-sp13_S_contig18651.5854.1 vs. uniprot
Match: A0A0G0X4X9_9BACT (Secreted protein n=1 Tax=Candidatus Daviesbacteria bacterium GW2011_GWA2_40_9 TaxID=1618424 RepID=A0A0G0X4X9_9BACT)

HSP 1 Score: 156 bits (395), Expect = 8.910e-42
Identity = 94/248 (37.90%), Postives = 137/248 (55.24%), Query Frame = 1
Query:    4 SLQALLDDASPGDTIYIPEGTHDVSLTTVVDGTEDEPITIRNELGTSAEDCVLRGDDRARVLEVLHNHYIIQGFTIDGDDGSGD----YKEQLLYIEGSRDPSEVDGVDSSITGVHVQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGIEDFQQDSDGSNGEGVYIGTALNQI-DEKNGDDVVDECTGIVVMNNEIDTQACPRRQPGSEGVDIKEGSYGNVVYGNTIRGQMDEETGGKQPASSKNV 732
            ++Q  +D A  G+TI +  GT+   + T  +GT D+PI I     +  ++ V++G  + R+ E+ H+   ++GFTIDG  GS      Y+++LLY++G           S +TG+ V GM LKNAG EC+R+RYFA N  +  N I  CG+ DF+ +  G NGEG+YIGTA  Q+ D KN     D+  G  + +N IDTQ       G+E VDIKE +  N++  N   GQ D  +GG       N 
Sbjct:  118 TIQKAVDLAQGGETIALAPGTYSQDIITKRNGTSDKPIII-----SGPKEAVIKGGGKGRIFEINHDSITLRGFTIDGLFGSSSSSSGYRDKLLYVQGKE-------TKSGVTGLKVLGMTLKNAGGECIRLRYFAQNNEIAGNTITNCGVYDFKFNGGGKNGEGIYIGTAPEQLGDGKNPTSDPDQSNGNFIHDNTIDTQ-------GNECVDIKEAASANMMENNKCTGQKDSNSGGMDSRGEGNT 346          
BLAST of mRNA_Ecto-sp13_S_contig18651.5854.1 vs. uniprot
Match: A0A0G1XWI5_9BACT (Beta_helix domain-containing protein n=3 Tax=Candidatus Moranbacteria TaxID=1752737 RepID=A0A0G1XWI5_9BACT)

HSP 1 Score: 154 bits (389), Expect = 3.040e-41
Identity = 96/248 (38.71%), Postives = 136/248 (54.84%), Query Frame = 1
Query:    4 SLQALLDDASPGDTIYIPEGTHDVSLTTVVDGTEDEPITIRNELGTSAEDCVLRGDDRARVLEVLHNHYIIQGFTIDGDDGSGD----YKEQLLYIEGSRDPSEVDGVDSSITGVHVQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGIEDFQQDSDGSNGEGVYIGTALNQIDE-KNGDDVVDECTGIVVMNNEIDTQACPRRQPGSEGVDIKEGSYGNVVYGNTIRGQMDEETGGKQPASSKNV 732
            S+Q  +  A PG  I++ +GT+  ++ +  DGT   PI I     T +   +++G   +RV+E+ H+   ++ FT+DG  GS D    ++++L+Y++G  D          +TG+ V  M LKNAG EC+R+RYFA    +  N I  CG  DF  D  G NGEG+YIGTA  Q D+ KN  D  D   G  V  N IDTQ       G+E VD+KEGS GN+V  N   GQ D E+GG     + N+
Sbjct:   79 SIQKAIYLAGPGSAIHLADGTYMQNIVSKRDGTAKNPIRI-----TGSPSSIVQGGKISRVIEINHSFITLENFTVDGLVGSPDEKSGFRDKLIYVQGKGD-------GKGVTGLKVLKMSLKNAGGECVRLRYFAQKNEIADNTITGCGAYDFLLDGKGKNGEGIYIGTAPEQTDDGKNPTDERDHSNGNWVHGNTIDTQ-------GNECVDVKEGSSGNLVENNVCTGQKDSESGGLDSRGNGNI 307          
BLAST of mRNA_Ecto-sp13_S_contig18651.5854.1 vs. uniprot
Match: A0A1F6HQF6_9BACT (DUF1565 domain-containing protein n=1 Tax=Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_40_10 TaxID=1798593 RepID=A0A1F6HQF6_9BACT)

HSP 1 Score: 151 bits (381), Expect = 1.760e-40
Identity = 93/248 (37.50%), Postives = 137/248 (55.24%), Query Frame = 1
Query:    4 SLQALLDDASPGDTIYIPEGTHDVSLTTVVDGTEDEPITIRNELGTSAEDCVLRGDDRARVLEVLHNHYIIQGFTIDGDDGS----GDYKEQLLYIEGSRDPSEVDGVDSSITGVHVQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGIEDFQQDSDGSNGEGVYIGTALNQI-DEKNGDDVVDECTGIVVMNNEIDTQACPRRQPGSEGVDIKEGSYGNVVYGNTIRGQMDEETGGKQPASSKNV 732
            ++Q  +D A PGD+I +  G +   + T  +GT+D PI IR      +++ VL+G+   R+ E+ HN+  + GF+IDG  G       ++++LLY++G           + +TG+ VQ M  KNAG EC+R+RYFA N  +  + I  CG+  F    DG NGEG+YIGTA  Q+ D +N     D      + +N+I+TQ       G+E VDIKEGS  N+V  N   GQ D E+GG     + NV
Sbjct:   34 TIQKAVDKALPGDSITLASGVYRQDVITKRNGTQDLPIIIRG-----SKNAVLKGNKNTRIFEINHNYITLDGFSIDGLYGDLNRRSGFRDKLLYVQGKE-------AKNGVTGLKVQNMTFKNAGGECIRLRYFAHNNEISNSTISNCGVYYFVFKEDGKNGEGIYIGTAPEQLRDGRNPTKDSDNSMDNWIHHNKINTQ-------GNECVDIKEGSTANIVEFNDCTGQKDIESGGLDSRGNNNV 262          
BLAST of mRNA_Ecto-sp13_S_contig18651.5854.1 vs. uniprot
Match: A0A0G0AZ49_9BACT (Secreted protein n=1 Tax=Parcubacteria group bacterium GW2011_GWC2_32_10 TaxID=1618918 RepID=A0A0G0AZ49_9BACT)

HSP 1 Score: 152 bits (385), Expect = 2.400e-39
Identity = 93/247 (37.65%), Postives = 138/247 (55.87%), Query Frame = 1
Query:    4 SLQALLDDASPGDTIYIPEGTHDVSLTTVVDGTEDEPITIRNELGTSAEDCVLRGDDRARVLEVLHNHYIIQGFTIDGDDGSGD----YKEQLLYIEGSRDPSEVDGVDSSITGVHVQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGIEDFQQDSDGSNGEGVYIGTALNQIDEKNGDDVVDECTGIVVMNNEIDTQACPRRQPGSEGVDIKEGSYGNVVYGNTIRGQMDEETGGKQPASSKNV 732
            ++Q  ++ A PG TIY+  G +   + +  +G+   PI+I   LG   +D +++G   +RV+E+ H++ II GFT+DG  G       Y++ L+Y  G    +        +TG+ +  M +KN+G EC+R++YFA N  +  N I  CGI DF+  + G NGEG+YIGTA  Q+  KN    +D+     + NN I T        G+EGVDIKEGS GN+V  N IRGQ D E+GG       N+
Sbjct:   69 TIQKAVNLAQPGQTIYLLPGQYFQDIVSARNGSLQSPISI---LGR--QDAIIKGAGASRVIEINHDNIIISGFTLDGLYGDASKASGYRDMLIYAVGKESKN-------GVTGLKITDMNIKNSGGECIRLKYFAQNNEIANNVIQNCGIYDFKFSAGGKNGEGIYIGTAPEQL-SKNPTLDIDKSNNNYIHNNSIQTN-------GNEGVDIKEGSTGNIVEYNIIRGQKDSESGGLDSRGDSNI 295          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18651.5854.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRT2_ECTSI2.330e-13294.37EsV-1-164 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A1F7IHP9_9BACT6.070e-4739.52Uncharacterized protein n=1 Tax=Candidatus Roizman... [more]
A0A6H5JYT7_9PHAE2.540e-4441.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L8H5_9PHAE4.540e-4441.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1F7I8U6_9BACT2.330e-4338.46Uncharacterized protein n=1 Tax=Candidatus Roizman... [more]
A0A0G0APH1_9BACT4.460e-4238.71Beta_helix domain-containing protein n=2 Tax=Candi... [more]
A0A0G0X4X9_9BACT8.910e-4237.90Secreted protein n=1 Tax=Candidatus Daviesbacteria... [more]
A0A0G1XWI5_9BACT3.040e-4138.71Beta_helix domain-containing protein n=3 Tax=Candi... [more]
A0A1F6HQF6_9BACT1.760e-4037.50DUF1565 domain-containing protein n=1 Tax=Candidat... [more]
A0A0G0AZ49_9BACT2.400e-3937.65Secreted protein n=1 Tax=Parcubacteria group bacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18651contigEcto-sp13_S_contig18651:118..3435 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score400.2
Seed ortholog evalue6.9e-109
Seed eggNOG ortholog2880.D7FRT2
Model size732
KEGG koko:K06560
KEGG Pathwayko04145,ko05152,map04145,map05152
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
Cds size732
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04090,ko04091,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18651.5854.1prot_Ecto-sp13_S_contig18651.5854.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig18651 118..3435 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462956.4749959-CDS-Ecto-sp13_S_contig18651:117..2071681462956.4749959-CDS-Ecto-sp13_S_contig18651:117..207Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18651 118..207 +
1681462956.48455-CDS-Ecto-sp13_S_contig18651:1040..11691681462956.48455-CDS-Ecto-sp13_S_contig18651:1040..1169Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18651 1041..1169 +
1681462956.4945705-CDS-Ecto-sp13_S_contig18651:1306..13701681462956.4945705-CDS-Ecto-sp13_S_contig18651:1306..1370Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18651 1307..1370 +
1681462956.5063226-CDS-Ecto-sp13_S_contig18651:1663..18701681462956.5063226-CDS-Ecto-sp13_S_contig18651:1663..1870Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18651 1664..1870 +
1681462956.5147233-CDS-Ecto-sp13_S_contig18651:2743..28651681462956.5147233-CDS-Ecto-sp13_S_contig18651:2743..2865Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18651 2744..2865 +
1681462956.524206-CDS-Ecto-sp13_S_contig18651:3315..34351681462956.524206-CDS-Ecto-sp13_S_contig18651:3315..3435Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18651 3316..3435 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig18651.5854.1

>prot_Ecto-sp13_S_contig18651.5854.1 ID=prot_Ecto-sp13_S_contig18651.5854.1|Name=mRNA_Ecto-sp13_S_contig18651.5854.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=244bp
TSLQALLDDASPGDTIYIPEGTHDVSLTTVVDGTEDEPITIRNELGTSAE
DCVLRGDDRARVLEVLHNHYIIQGFTIDGDDGSGDYKEQLLYIEGSRDPS
EVDGVDSSITGVHVQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGIED
FQQDSDGSNGEGVYIGTALNQIDEKNGDDVVDECTGIVVMNNEIDTQACP
RRQPGSEGVDIKEGSYGNVVYGNTIRGQMDEETGGKQPASSKNV
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mRNA from alignment at Ecto-sp13_S_contig18651:118..3435+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig18651.5854.1 ID=mRNA_Ecto-sp13_S_contig18651.5854.1|Name=mRNA_Ecto-sp13_S_contig18651.5854.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3318bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18651:118..3435+ (Ectocarpus species13 EcNAP12_S_4_19m)
ACGTCACTGCAGGCGTTGCTGGACGATGCATCGCCAGGGGACACCATCTA CATCCCGGAAGGCACGCACGACGTCAGCTTGACTACGGTGGTAAGTCTTA AGAACGTGGTTTTTCATCGTTGCTGCTGTTGGTTTGCTTTGTCATTTTCG GCGTCGGATTGCAACGTGGTTCAATGCTCTTGTCATCGGTGCCCTAGGCG CTGATATGATCCTACCCTTTGACGAGCTTGGACCAAAGCTTCCATAGGGA AAAGACGAGTCTCTCGGCGTTATAAGCCAATTCTTCCAGTCTCCGGGGAA AGTTTTTTTTTCGCGGGGGTTGAGCTTGTTGGCTTCCTCGTCAACAACGT GGCGGTGACCTCACCACGACGGTGGAGTATTGTCCTGATGCCAAATCCAT GGGGGCTTCGCCATTGTATCTGCCGCTGTGTGCACACCTTTCCGTGTCGT GTCAGCCTGCTGCGGCAACGTTTTTGTATTTCGGTTGGAACTTCAGGAAG CGGTAAGGAGTTGCGGGGGGCGGAGGGGGGGGGTGTACTCATAGTCGTGC ATGCCGTAGTCGTTAGACCATCGACCTCGCATCCCTATTAAGCCGGGACG GAGCACGCCGGCTTCTCACCGGACCAGGCTCTCATATCACCAAGTGCGAA TACCTCATGGAGTTGGGGCTCATTGTTGCCCGTGTGTTCCCGCCAGAACA CGCGACCGTTACTATTCGGCACCATGGTAGTAGTGATAATCTTACACAGG GCTTTGGCTGTGCCCTGAGGTTTTACAGGCATTGAACCGGCACCGGCTCT CGTATATGGCACGGACATGCCGTGGATCGAGGTCGAAGTATCAAGTTGTC GTAACCAGGTAAATAGCCCGACGAAAGCATGCAACCGACGGCAATTGCAA CGCTAAATGATGTGATGATGCAGGTGGATGGGACGGAAGACGAGCCGATC ACGATCAGGAACGAGTTGGGGACGTCCGCAGAGGACTGCGTGCTGAGAGG GGATGACCGCGCGAGGGTGCTGGAAGTCTTGCACAACCACTACATCATTC AGGTGGGTGGGTAGCCGGGATCCCCCTGTGCGTCGCGCATCTCGGCACAC AAGTGTCCGTTCCTCCACAGAGATACCGGTATCGAATTTCCCAAATTAAA GCTTACCCTTGTAACTTGCGGTCTATTCATTTTCTTCAGGGCTTCACGAT CGACGGGGACGACGGTTCGGGCGACTACAAGGAACAACTCCTCTACATAG AAGGTGAACCAAAACAAAACGAAACTACTCATCTCAGTTCTTATTTTAGG GTAAGCAAGATAAATCGTTTTTTGTGCGAAAATCAACAGAAGCAACAACG GCATGTTGTACGAGGATACTTGTTCCCCCCCCACTGGCAGTTGCCTTTTT CCCCCGGCCGCGACTAACCATCGGTGATCGATCCTTCCTCTCGAGGATGC GTGGTCAACTTGCTAGCGACTACGGCATGCATTTACATTAGTATGCCCCC CCCCCCCTCCCTCCCGATCGTTCCCAATGGTTGAATGAACCCCCAGGTTC GCGGGACCCCAGTGAAGTCGACGGTGTCGATTCGTCGATCACCGGTGTCC ATGTCCAGGGGATGGTGTTGAAAAACGCCGGCAAGGAGTGCTTGAGGATA AGGTACTTCGCCACAAACTGCGTTGTCCAGGTGAACGAGATCGGCCCCTG CGGGATTGAGGACTTCCAGCAGGACTCGGACGGTTCCAACGGAGAGGGCG TTTGTGAGTTTTAATGGTATATTTCTTGTTTTGTAGGTTAAGGAAATGCA TGCAACCGTTTTACTTTGAAGTGTATCTTCAGGAAATATACATTTGTTAC GACTAAAGAAAGACGATGTACCAGTTAGAAATAAAACCGGAGTCGAAGGG GATGGGGTGTTTATAGGAACAGCTCGGGTATCGTGTTGGTACTTCTGTCA CGAGTTTTCTGCTGGACAGGTATGAGGCGTTCACGATTGAGTTTCGTCTT GTACTTTTTTTTGTTTTCTAAATACGTCGTGACGAATCCATCTGTATCTG CAGAAAAGAAAATCACAACAGCTAAGAAGAGTGTGTCGTTTTTGGTAGTT CTCTCTTTTCGTCACGAGTTTTCTGCTGGACAGATGCGATGCGTTTTTGT TTTCGTCAAGTCGAGGTCGGCGAGATTTCGCCTGCTCTGCGGTCGTGTGT CGTGTGTGTTGGTAGTAATGTGACCTAGGTAGATGCCAGTTTTGTTTCTT TCGCCGAAACGTGCGTTACCAGGTTTGTCTCAACCGAGGGTTTTGTTTCG AGTTGGCTAGAAAGAGGCCTCCTCTTCCCTTTGGAGGCGCTCCGCAAGAA ATTCAAGAAGCAGAGTCAGAGGGGGGGAGAGAGAGAGAATGAGTGTTTGA ACGGCAAGACCGTTGTTCTCAGGGACGCGTGAGACACTCGCTCAGACTGT CGGGACACGGACGCAGTAGTTTACGCGCGTCAGCAGCGAATCCGTTGCTG CTTCCCCGATGTGTACAATGTTATTAATGTGTTGACTCTACAGTAGGGAG TGTTTGACGATAGGTCTTCCCCCCGGTCCCCCCCCCCGCTACCGATGGCC TCTGTATCCCTGTGTCTCGACGGCAGACATCGGGACGGCTTTGAATCAGA TCGATGAGAAGAACGGGGACGACGTGGTGGACGAGTGCACAGGCATCGTG GTCATGAACAACGAGATCGACACGCAGGCATGTCCCCGAAGACAGCCTGT ACACGTGCTGAATCGACTTTTGTGTTGTATGGCACAAACTCCAGTGCAAA AATTATCTTGGCATGAGTTGTCTTGCGGTTTGTTTGCTGAAGTCATCTTG CGTCGGTGCATGACGCCCATTTGTTCGTGTTTGATGCGGTGCTTGAAAGG TCCCGATTTATTGCCGGTATGTGCCCAGAGATGGCTTGGGTTATCCCGGC TGTGCCTGCCGGAAACACGGCGCTGTACCTGAGAGTACGGAATGGCTTGG GTCATTCCGGCTTTGCAAGCCGAAAACGCGGCGCAATACCTGGCACCGGA ACTGTGTAACCGGCGATAACCACCCCCCTCCCGAACTGTAGTTTGTTGAA ACCGTTTCCGCTCGTCCTTGTAGTAGATGGGGTGACGCCAGCCAGCCCAC CAACGCCGATCTCCTCTGCCAATTTCGCGCTTCTTTGTGGTTGCGCAGGG TAGCGAGGGCGTTGACATCAAGGAAGGGTCGTACGGTAACGTGGTCTACG GCAACACCATCAGGGGGCAGATGGACGAAGAAACCGGGGGTAAGCAACCA GCAAGCAGTAAGAATGTT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18651:118..3435+

>mRNA_Ecto-sp13_S_contig18651.5854.1 ID=mRNA_Ecto-sp13_S_contig18651.5854.1|Name=mRNA_Ecto-sp13_S_contig18651.5854.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=732bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18651:118..3435+ (Ectocarpus species13 EcNAP12_S_4_19m)
ACGTCACTGCAGGCGTTGCTGGACGATGCATCGCCAGGGGACACCATCTA
CATCCCGGAAGGCACGCACGACGTCAGCTTGACTACGGTGGTGGATGGGA
CGGAAGACGAGCCGATCACGATCAGGAACGAGTTGGGGACGTCCGCAGAG
GACTGCGTGCTGAGAGGGGATGACCGCGCGAGGGTGCTGGAAGTCTTGCA
CAACCACTACATCATTCAGGGCTTCACGATCGACGGGGACGACGGTTCGG
GCGACTACAAGGAACAACTCCTCTACATAGAAGGTTCGCGGGACCCCAGT
GAAGTCGACGGTGTCGATTCGTCGATCACCGGTGTCCATGTCCAGGGGAT
GGTGTTGAAAAACGCCGGCAAGGAGTGCTTGAGGATAAGGTACTTCGCCA
CAAACTGCGTTGTCCAGGTGAACGAGATCGGCCCCTGCGGGATTGAGGAC
TTCCAGCAGGACTCGGACGGTTCCAACGGAGAGGGCGTTTACATCGGGAC
GGCTTTGAATCAGATCGATGAGAAGAACGGGGACGACGTGGTGGACGAGT
GCACAGGCATCGTGGTCATGAACAACGAGATCGACACGCAGGCATGTCCC
CGAAGACAGCCTGGTAGCGAGGGCGTTGACATCAAGGAAGGGTCGTACGG
TAACGTGGTCTACGGCAACACCATCAGGGGGCAGATGGACGAAGAAACCG
GGGGTAAGCAACCAGCAAGCAGTAAGAATGTT
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