mRNA_Ecto-sp13_S_contig1864.5847.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1864.5847.1 vs. uniprot
Match: A0A6H5LR29_9PHAE (GT23 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LR29_9PHAE) HSP 1 Score: 419 bits (1078), Expect = 2.580e-137 Identity = 222/292 (76.03%), Postives = 229/292 (78.42%), Query Frame = 2
Query: 641 MRRKGVPKEDLVEAPKVHWQRIRTRQAWRAQEEALKEYGVDTFGALSV--------------------------------------------------------MARLLWKNLTPWLQEDVRKALERPDLDVFRRKPFVGLHVRRGDKVAEGEANKVETKEYLSAAVKFFDNEASQDKQDIEAIWVASDDHNVVEEVRSIARQYFPNVLDEDIVWVSGGARGGAVTTHTKSEGYPGFVMVFADLEMLAAGSVFVGTYTSNVSRLVALLREGIHGHARDSCISLDKTEFGLQY 1348
M RKGV KEDLVEAPKVHWQRIRT+QAWRAQEEALKEYGVDTFGALSV MARLLWKNLTPWLQEDVRKALERPDLDVFRRKPFVGLHVRRGDKV EGEA KVETKEYLSAA +FFDN+ASQDKQDIEAIWVASDDH VVEEVR+IARQYFPNVLDEDIVWVSGGARGGAVTTHTKS+GY GFVMVFADL+MLAAGS+FVGTYTSNVSRLVALLREGIHGHARDSCISLDKTEFGLQY
Sbjct: 1 MTRKGVSKEDLVEAPKVHWQRIRTQQAWRAQEEALKEYGVDTFGALSVRQQWLSKGPLLLWGIRTEERCPGHAKGAEGCEDLPTAHSAPRREHLRDSFAPDTQVMARLLWKNLTPWLQEDVRKALERPDLDVFRRKPFVGLHVRRGDKVGEGEAQKVETKEYLSAAARFFDNKASQDKQDIEAIWVASDDHKVVEEVRAIARQYFPNVLDEDIVWVSGGARGGAVTTHTKSQGYQGFVMVFADLKMLAAGSLFVGTYTSNVSRLVALLREGIHGHARDSCISLDKTEFGLQY 292
BLAST of mRNA_Ecto-sp13_S_contig1864.5847.1 vs. uniprot
Match: A0A6H5JTL0_9PHAE (GT23 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTL0_9PHAE) HSP 1 Score: 286 bits (733), Expect = 3.170e-84 Identity = 155/337 (45.99%), Postives = 210/337 (62.31%), Query Frame = 2
Query: 338 LFSREWESMYASGHVGCDLGRKRYYWRPCGLGSNIVHLLNAFVYALTVNKWSDVAVMSPPGTLKFLQCQGDQG-QSLRGYHCLFRPMPHVCNFGTEKEWKNFMRRKGVPKEDLVEAPKVHWQRIRTRQAWRAQE--EALKEYGVDTFGALSVMARLLWKNLTPWLQEDVRKALERPDLDVFRRKPFVGLHVRRGDKVAEGEANKVETKEYLSAAVKFFDNEASQ-DKQDIEAIWVASDDHNVVEEVRSIARQYFPNVLDEDIVWVSGGARGGA----VTTHTKSEGYPGFVMVFADLEMLAAGSVFVGTYTSNVSRLVALLREGIHGHARDSCISLD 1324
LFS EW + YA G GCDL R + WR GLGSN+ ++LNA+VYAL+V KWSD+ V+ +K + C+ + G ++ G+ CLF+PMPH+C F + +E M KG+PK DLVEA ++ +R + +E +L+ GVD AL+ MA+ LW N+TPWLQ DV DVF+ PF+GLH+RRGDKV++GEA+ +EYL AV+F + SQ DI+ IWVASD+ V+ +V+ IA+ Y PNV + DI W SGG GG T T E Y FV FADL+ L A +FVGT++SN+ RL+ LLRE I R S +S+D
Sbjct: 101 LFSSEWAAEYARGEAGCDLARGSFMWRGHGLGSNVNNMLNAWVYALSVEKWSDMTVVVDENQMKQVDCEEESGGEAQAGWDCLFKPMPHLCTFPSAEE---HMVSKGLPKADLVEAARLDQDAVR----FHPEEIVASLEGSGVDHIAALAAMAKYLWSNVTPWLQADVDFVTRASPSDVFQESPFLGLHIRRGDKVSQGEASMYLCEEYLETAVEFLEGNDSQLSVGDIKGIWVASDEPKVIAKVKQIAQDYLPNVSEGDIFWASGGVEGGPEIERTATRTDQETYADFVYTFADLQQLTAADLFVGTFSSNIGRLLVLLRESIGLKDRASAVSID 430
BLAST of mRNA_Ecto-sp13_S_contig1864.5847.1 vs. uniprot
Match: D7G435_ECTSI (Alpha-(1,6)-fucosyltransferase, family GT23 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G435_ECTSI) HSP 1 Score: 281 bits (719), Expect = 4.170e-82 Identity = 152/338 (44.97%), Postives = 207/338 (61.24%), Query Frame = 2
Query: 338 LFSREWESMYASGHVGCDLGRKRYYWRPCGLGSNIVHLLNAFVYALTVNKWSDVAVMSPPGTLKFLQCQGDQG-QSLRGYHCLFRPMPHVCNFGTEKEWKNFMRRKGVPKEDLVEAPKVHWQRIRTRQAWRAQE--EALKEYGVDTFGALSVMARLLWKNLTPWLQEDVRKALERPDLDVFRRKPFVGLHVRRGDKVAEGE-ANKVETKEYLSAAVKFFDNEASQ-DKQDIEAIWVASDDHNVVEEVRSIARQYFPNVLDEDIVWVSGGARGGA----VTTHTKSEGYPGFVMVFADLEMLAAGSVFVGTYTSNVSRLVALLREGIHGHARDSCISLD 1324
LFS EW YA G GCDL R + WR GLGSNI ++LNA+VYAL+V KWSD+ V+ +K++ C + G ++ G+ C+F+PMPH+C F + + WK +M K +P+ +LVE ++ +R + +E +L+ GVD AL+ MA+ LW N+TPWLQ DV DVF+ PF+GLH+RRGDKV G A+ KEYL AAV+F + + SQ DI+ IWVASD+ V+ +V+ IA Y PNV ++DI W SGG GG T T E Y FV ADL+ L A +FVGT++SN+ RL+ LLRE I R S +S+D
Sbjct: 105 LFSSEWAVEYARGEEGCDLARGSFMWRGQGLGSNINNMLNAWVYALSVEKWSDMTVVVGENQMKWVDCGEESGGEAQTGWDCIFKPMPHLCTFPSAESWKEYMVSKDLPEAELVEVARLDQDAVR----FHPEEIVASLEGSGVDHIAALAAMAKYLWSNVTPWLQADVDFVTRASPSDVFQESPFLGLHIRRGDKVTHGRRASMYLCKEYLEAAVEFLEGDDSQLSVGDIKGIWVASDEPKVIAKVKQIAPDYLPNVSEDDIFWASGGVEGGPEIGRTATRTDKETYADFVYTLADLQQLTAADLFVGTFSSNMGRLLVLLRESIGLKDRASAVSID 438
BLAST of mRNA_Ecto-sp13_S_contig1864.5847.1 vs. uniprot
Match: D8LU00_ECTSI (Similar to putative alpha-6-fucosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU00_ECTSI) HSP 1 Score: 93.2 bits (230), Expect = 2.850e-18 Identity = 56/153 (36.60%), Postives = 89/153 (58.17%), Query Frame = 2
Query: 869 FRRKPFVGLHVRRGDKVAEGEANKVETKEYLSAAVKFFDNEASQ-DKQDIEAIWVASDDHNVVEEVRSIARQYFPNVLDEDIVWVSGGARGGAVTTHTKSEGYPGFVMVFADLEMLAAGSVFVGTYTSNVSRLVALLREGIHGHARDSCISLD 1324
R +VGLH+RR DK E V+TK YL+ AV + + + +I IWV+SDD V +EV+ +A ++FP + +++V+GG + Y V + A+LEMLA +VF GT++SNV R+VAL+R+ ++ +S +S+D
Sbjct: 1 MRSGKYVGLHIRRTDKA--NEVQPVKTKAYLAKAVNYLASPTNDMAATNITGIWVSSDDEAVFDEVKQLASEFFPGIAPNAVLYVTGGKPVQLMRGAADRNSYEAMVYLRAELEMLAGSAVFSGTFSSNVGRMVALMRKTLN-MPDESAVSVD 150
BLAST of mRNA_Ecto-sp13_S_contig1864.5847.1 vs. uniprot
Match: A0A450SPZ8_9GAMM (FUT8_N_cat domain-containing protein n=1 Tax=Candidatus Kentron sp. DK TaxID=2126562 RepID=A0A450SPZ8_9GAMM) HSP 1 Score: 65.9 bits (159), Expect = 8.780e-8 Identity = 53/186 (28.49%), Postives = 87/186 (46.77%), Query Frame = 2
Query: 761 DTFGALSVMARLLWKNLTPWLQEDVRKALERPDLDVFRRKPFVGLHVRRGDKVAEGEANKVETKEYLSAAVKFFDNEASQDKQDIEAIWVASDDHNVVEEVRSIARQYFPNVLDEDIVWVSGGARGGAVTTH----TKSEGYPGFVMVFADLEMLAAGSVFVGTYTSNVSRLVALLREGIHGHARD 1306
D F A ++ +L+ + +D+ ++ D ++G+HVRRGDKV GE EY + + + ++VA+DD+ V+ E R+I FP D I+ R G H +K E + +F D+ L+ FVGT++SN+ RL+AL R+G + H+ D
Sbjct: 139 DVFHAKRILLQLIHR-----FNDDIVNEMKVKDRLKDEMNTYIGVHVRRGDKVTTGEGASFHAAEYSDLIREKY--------PECRQLFVATDDYAVITEFRNI----FPE--DYRIMTFCSQERIGHDQEHFNGKSKYERKKEMIDLFLDIRFLSDAKAFVGTFSSNIGRLIALFRDGKNCHSLD 305
BLAST of mRNA_Ecto-sp13_S_contig1864.5847.1 vs. uniprot
Match: UPI0009959EE2 (alpha-(1,6)-fucosyltransferase n=1 Tax=Pseudomyrmex gracilis TaxID=219809 RepID=UPI0009959EE2) HSP 1 Score: 66.2 bits (160), Expect = 1.950e-7 Identity = 58/186 (31.18%), Postives = 88/186 (47.31%), Query Frame = 2
Query: 824 QEDVRKALERPDLDVFRRKPFVGLHVRRGDKVAEGEANKVETKEYLSAAVKFFDNEASQDKQDIEAIWVASDDHNVVEEVRSIARQYFPN---VLDEDIVWVSGGARGGAVTTHTKSEGYPGFVMVFADLEMLAAGSVFVGTYTSNVSRLVALLREGIHGHARDSCISLDKTEFGLQY*AAANPLP 1372
Q+ V+K LER + +KP VG+HVRR DKV EA + EY+S ++FD + K D+ +++ASDD V+ AR+ +PN + D +I A +V G ++ D+ +L+ V T++S V R+ L + H A D SLD + Y NP P
Sbjct: 349 QDHVKKTLERAKEKLGFKKPIVGVHVRRTDKVGT-EAAYHDIDEYMSKVEQYFDE--LETKPDVRRVFLASDDPKVI----LTARKRYPNYEIIGDPEI------AETASVAKRYSDTSLQGIII---DIHLLSECDYLVCTFSSQVCRVAYELMQTFHTDAYDKFTSLDD----IYYYGGQNPHP 514
BLAST of mRNA_Ecto-sp13_S_contig1864.5847.1 vs. uniprot
Match: E2AA08_CAMFO (Alpha-(1,6)-fucosyltransferase n=2 Tax=Formicinae TaxID=7479 RepID=E2AA08_CAMFO) HSP 1 Score: 64.7 bits (156), Expect = 5.890e-7 Identity = 80/324 (24.69%), Postives = 143/324 (44.14%), Query Frame = 2
Query: 416 RPCGLGSNIVHLLNAFVYALTVNKWSDVAVMSPPGTLKFLQCQGDQGQSLRGYHCLFRPMPHVCNFGTEKEWKNFMRRKGVPKEDLVEAPKVH--WQRIRTRQAWRAQEEALKEYGVDTFGALSVMARLLWKNLTPWLQEDVRKALERPDLDVFRRKPFVGLHVRRGDKVAEGEANKVETKEYLSAAVKFFDNEASQDKQDIEAIWVASDDHNVVEEVRSIARQYFPN---VLDEDIVWVSGGARGGAVTTHTKSEGYPGFVMVFADLEMLAAGSVFVGTYTSNVSRLVALLREGIHGHARDSCISLDKTEFGLQY*AAANPLP 1372
+ CG G I H+ F+ A + TL ++ +G + Q G+ +F+P+ + C T N+ G P + ++ P V + + R + + A + + + + ++L + P Q+ V++ LE+ + +KP VG+HVRR DKV EA + EY+S ++FD + K D++ +++ASDD V+ + AR+ + N + D DI A +V G ++ D+++L+ V T++S V R+ L + + A D SLD + Y NP P
Sbjct: 230 KGCGFGCQIHHITYCFLVAYGTER-----------TL-IIKSKGWRYQK-EGWESVFKPLSNTCLSTTGVSHSNWP---GDPSKQVISLPIVDNVYPKPRFQPPSVPADLAPRLEKIHGHPLVWWVGQVLKYLMRP--QDHVKRTLEKARERLGFKKPIVGVHVRRTDKVGT-EAAYHDIDEYMSKVEQYFDE--LETKPDVKRVFLASDDPKVI----TTARKRYTNYEIIGDPDI------AETASVAKRYSDVSLQGIII---DIQLLSECDYLVCTFSSQVCRVAYELMQTYYADAYDRFSSLDD----IYYYGGQNPHP 515
BLAST of mRNA_Ecto-sp13_S_contig1864.5847.1 vs. uniprot
Match: A0A4Y7NI76_9CRUS (Alpha-(1,6)-fucosyltransferase n=1 Tax=Moina brachiata TaxID=675436 RepID=A0A4Y7NI76_9CRUS) HSP 1 Score: 63.9 bits (154), Expect = 1.020e-6 Identity = 52/171 (30.41%), Postives = 83/171 (48.54%), Query Frame = 2
Query: 824 QEDVRKALERPDLDVFRRKPFVGLHVRRGDKVAEGEANKVETKEYLSAAVKFFDNEASQDKQDIEAIWVASDDHNVVEEVRSIARQYFPNVLDEDIVWVSGGARGGAVTTHTKSEGYPGFVMVFADLEMLAAGSVFVGTYTSNVSRLVALLREGIHGHARDSCISLDKTEF 1336
Q + ++ L+ + RKP VG+HVRR DKV EA EY++ +F+ + K D+ +++ASDD +V+ E A++ +PN V + A+G AV T G ++ D+ MLA V T++S V RL + + +H A SLD +
Sbjct: 349 QPETQRMLDEAKEKMNFRKPIVGVHVRRTDKVGT-EAAFHSVDEYMTYVDDYFNQLELRQKVDVRRVYMASDDPSVLPE----AKKKYPNYEFLGDVSI---AKGAAVATRYTDSSLRGILI---DIHMLAHADYLVCTFSSQVCRLAYEIMQALHPDASSKFKSLDDIYY 508
BLAST of mRNA_Ecto-sp13_S_contig1864.5847.1 vs. uniprot
Match: A0A8J1TRN2_OWEFU (Ofus.G053333 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1TRN2_OWEFU) HSP 1 Score: 61.2 bits (147), Expect = 2.850e-6 Identity = 52/161 (32.30%), Postives = 78/161 (48.45%), Query Frame = 2
Query: 875 RKPFVGLHVRRGDKVAEG---EANKVETKEYLSAAVKFFDNEASQDKQDIEAIWVASDDHNVVEEVRSIARQYFPNVLDEDIVWVSGGARGGAVTTHTKSEGYPGFVMVFADLEMLAAGSVFVGTYTSNVSRLVALLREGIHGHARDSCISLDKTEFGLQY 1348
R+P +G+HVRRGDKVA G EA+ +Y++ KF +Q + AI+VA+DD +V+ E R+ QY D + T T F+ + D+ +LA FVGT+TSN+ LV LR+ + +D T+F L +
Sbjct: 140 RRPIIGVHVRRGDKVAPGPLKEADLTPLTKYMNEIDKFVLQ--TQTNKTRYAIFVATDDVHVLNEARNTYEQYTFIRYDSN------------QTIRTN------FLPILTDILLLAETDYFVGTFTSNIGLLVHELRQQRY---KDGSCMAKSTDFPLYH 277
BLAST of mRNA_Ecto-sp13_S_contig1864.5847.1 vs. uniprot
Match: W4WWN8_ATTCE (Alpha-(1,6)-fucosyltransferase n=24 Tax=Formicidae TaxID=36668 RepID=W4WWN8_ATTCE) HSP 1 Score: 62.4 bits (150), Expect = 3.100e-6 Identity = 77/324 (23.77%), Postives = 135/324 (41.67%), Query Frame = 2
Query: 416 RPCGLGSNIVHLLNAFVYALTVNKWSDVAVMSPPGTLKFLQCQGDQGQSLRGYHCLFRPMPHVCNFGTEKEWKNFMRRKGVPKEDLVEAPKVH--WQRIRTRQAWRAQEEALKEYGVDTFGALSVMARLLWKNLTPWLQEDVRKALERPDLDVFRRKPFVGLHVRRGDKVAEGEANKVETKEYLSAAVKFFDNEASQDKQDIEAIWVASDDHNVVEEVRSIARQYFPN---VLDEDIVWVSGGARGGAVTTHTKSEGYPGFVMVFADLEMLAAGSVFVGTYTSNVSRLVALLREGIHGHARDSCISLDKTEFGLQY*AAANPLP 1372
+ CG G I H+ F+ A + +M G G+ +F+P+ C T N+ G P + ++ P V + + R + + A + + + + ++L + P Q+ V++ LE+ + +KP VG+HVRR DKV EA + EY+ ++FD + K D+ +++ASDD V+ + AR+ +PN + D +I A +V G ++ D+ +L+ V T++S V R+ L + + A D SLD + Y NP P
Sbjct: 237 KGCGFGCQIHHITYCFLVAYGTER---TLIMKSKGWRYHKD----------GWESVFKPLSDTCLSTTGTSHSNWP---GDPSKQVISLPIVDNVYPKPRFQPPSVPADLAPRLEKIHGHPLVWWVGQVLKYLMRP--QDHVKRTLEKAKERLGFKKPIVGVHVRRTDKVGT-EAAYHDIDEYMIKVEQYFDE--LETKPDVRRVFLASDDPKVI----TTARKRYPNYEIIGDPEI------AETASVAKRYSDTSLQGIII---DIHLLSECDYLVCTFSSQVCRVAYELMQTFYADAYDRFASLDD----IYYYGGQNPHP 522 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1864.5847.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1864.5847.1 >prot_Ecto-sp13_S_contig1864.5847.1 ID=prot_Ecto-sp13_S_contig1864.5847.1|Name=mRNA_Ecto-sp13_S_contig1864.5847.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=399bp MMALWRRRVGFKSSAIIFILLQHFRTLTGTPHLSTIGVEAHADGHVLGSVback to top mRNA from alignment at Ecto-sp13_S_contig1864:3992..13599- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1864.5847.1 ID=mRNA_Ecto-sp13_S_contig1864.5847.1|Name=mRNA_Ecto-sp13_S_contig1864.5847.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9608bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1864:3992..13599- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1864:3992..13599- >mRNA_Ecto-sp13_S_contig1864.5847.1 ID=mRNA_Ecto-sp13_S_contig1864.5847.1|Name=mRNA_Ecto-sp13_S_contig1864.5847.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1197bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1864:3992..13599- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |