prot_Ecto-sp13_S_contig1863.5842.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1863.5842.1
Unique Name	prot_Ecto-sp13_S_contig1863.5842.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	247

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1863.5842.1 vs. uniprot
Match: D7G509_ECTSI (Uncharacterized protein n=5 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G509_ECTSI)

HSP 1 Score: 334 bits (856), Expect = 1.110e-111
Identity = 195/246 (79.27%), Postives = 199/246 (80.89%), Query Frame = 0

Query:    1 QLFTLHLQFSDLQRSNAATVRDFSHYMWWAERTVDSLTGANALLENKLACLEADAQTGHDLYDQFRSDFLCSPRDGETTLSHKDAEISSLKQDNDQLVKANQDKDEEIKLLKAQLAMQLKQPQEGQHTSDAHTDVSTELPSPRVRFENGMTVARLHSTWGSAENVPGVSSFQAKRHPSVSTDSSAATIATAASGTFVSKASRSGTQSVATTTYLDTTADVKAATEFLIADTALAHWWLAATATSAG 246
            QLFTLHLQFSDLQRSNAATVRDFSHYMW AERTVDSLTGANALLENKLACLEAD QTGHDLYDQFRSDFLCS RDGET LSHKDAEISSLKQDN QLVKANQDKDEEIKLLKAQLAMQLKQPQE           +    +PR                       GVSSFQAK HPSVSTDSSAA IATAASGTFVSKASRSGT+SVATTTYLDTTAD KAA EFLIADTALAHWWL+ATATSAG
Sbjct:  144 QLFTLHLQFSDLQRSNAATVRDFSHYMWCAERTVDSLTGANALLENKLACLEADVQTGHDLYDQFRSDFLCSLRDGETALSHKDAEISSLKQDNAQLVKANQDKDEEIKLLKAQLAMQLKQPQEA---------CTAGGEAPRTSA--------------------GVSSFQAKGHPSVSTDSSAAVIATAASGTFVSKASRSGTKSVATTTYLDTTADDKAAAEFLIADTALAHWWLSATATSAG 360

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1863.5842.1 vs. uniprot
Match: A0A6H5KBI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBI0_9PHAE)

HSP 1 Score: 268 bits (686), Expect = 1.870e-84
Identity = 169/293 (57.68%), Postives = 179/293 (61.09%), Query Frame = 0

Query:    1 QLFTLHLQFSDLQRSNAATVRDFSHYMWWAERTVDSLTGANALLENKLACLEADAQTGHDLYDQFRSDFLCSPRDGETTLSH------------------------------------KDAEISSLKQDNDQLVKANQDKDEEIKLLKAQLAMQLKQPQEGQHT-----------------------------------------SDAHTDVSTELPSPR-----------VRFENGMTVARLHSTWGSAENVPGVSSFQAKRHPSVSTDSSAATIATAASGTFVSKASRSGT 205
            QLFTLHLQFSDLQRS AATVRDFSHYMW AER++DSL GANALLEN+LACLEADAQTGHDLYDQFRSDFLCS RDGETTLSH                                    KDAEISSLKQDN QLVK NQDKDEEIKLLKAQLA+Q KQP+EGQHT                                         ++AHTDVSTELPSPR                        + WGSAENVPGVSSFQ   + SV TDSSAATIATAASGTFVSKA+RSGT
Sbjct:  166 QLFTLHLQFSDLQRSIAATVRDFSHYMWCAERSIDSLAGANALLENRLACLEADAQTGHDLYDQFRSDFLCSLRDGETTLSHXFRLCGWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDAEISSLKQDNAQLVKVNQDKDEEIKLLKAQLAIQFKQPEEGQHTCERVADVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEANAHTDVSTELPSPRGLIXXXXXXXXXXXXXXXXXXXXXTRWGSAENVPGVSSFQTNNNHSVFTDSSAATIATAASGTFVSKATRSGT 458

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1863.5842.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1863.5842.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G509_ECTSI	1.110e-111	79.27	Uncharacterized protein n=5 Tax=Ectocarpus silicul...	[more]
A0A6H5KBI0_9PHAE	1.870e-84	57.68	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 34..54
None	No IPR available	COILS	Coil	Coil	coord: 87..121

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1863	contig	Ecto-sp13_S_contig1863:12493..15159 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1863.5842.1	mRNA_Ecto-sp13_S_contig1863.5842.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1863 12493..15159 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1863.5842.1 ID=prot_Ecto-sp13_S_contig1863.5842.1|Name=mRNA_Ecto-sp13_S_contig1863.5842.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=247bp
QLFTLHLQFSDLQRSNAATVRDFSHYMWWAERTVDSLTGANALLENKLAC
LEADAQTGHDLYDQFRSDFLCSPRDGETTLSHKDAEISSLKQDNDQLVKA
NQDKDEEIKLLKAQLAMQLKQPQEGQHTSDAHTDVSTELPSPRVRFENGM
TVARLHSTWGSAENVPGVSSFQAKRHPSVSTDSSAATIATAASGTFVSKA
SRSGTQSVATTTYLDTTADVKAATEFLIADTALAHWWLAATATSAG*