prot_Ecto-sp13_S_contig18629.5841.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18629.5841.1
Unique Nameprot_Ecto-sp13_S_contig18629.5841.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length196
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18629.5841.1 vs. uniprot
Match: A0A6H5L1B9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1B9_9PHAE)

HSP 1 Score: 351 bits (900), Expect = 3.260e-116
Identity = 180/193 (93.26%), Postives = 182/193 (94.30%), Query Frame = 0 
Query:    1 NPHTPHPGRAPDSPLSDIVELRDLLIPSKPVVAMFPVGVGCGGTVDGLAAESGSGLFGLPENAGVFQIGTNVTHAGRPDGRPFRLVDVQPRPVEDIVSDLKSKFGMALHMEVEYSRRFEGCHHGTETGRSGDSSSDNEEGPGSEESRSPLPPKADVSWAHILAQNQHKLQGLDEWETIRDSQIKPSVMRALDV 193
            NPHTPHPGRAPDSPLSDIVELRDLL PSKPVVAMFPVGVGCG TVDGLAAESGSGL GLPENAG+FQIGTNVTHA RPDGRPFRLVDVQ RPVEDIVSDLKSKFGMALHMEVEYSRRFEG   GTETGRSGDSSSD +EG GSEESRSPLPPKADVSWAHILAQNQHKLQGLDEWETIRDSQIKPSVMRALD 
Sbjct:  249 NPHTPHPGRAPDSPLSDIVELRDLLTPSKPVVAMFPVGVGCGATVDGLAAESGSGLLGLPENAGIFQIGTNVTHARRPDGRPFRLVDVQSRPVEDIVSDLKSKFGMALHMEVEYSRRFEGKQRGTETGRSGDSSSD-DEGAGSEESRSPLPPKADVSWAHILAQNQHKLQGLDEWETIRDSQIKPSVMRALDT 440
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BLAST of mRNA_Ecto-sp13_S_contig18629.5841.1 vs. uniprot
Match: A0A7S2XYW7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYW7_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 9.170e-5
Identity = 21/44 (47.73%), Postives = 32/44 (72.73%), Query Frame = 0 
Query:  150 LPPKADVSWAHILAQNQHKLQGLDEWETIRDSQIKPSVMRALDV 193
            LP K D++W HIL +   +L+GLDEW  I ++Q+ P++ RAL+V
Sbjct:   26 LPKKMDLAWGHILTEKHQELEGLDEWLYILETQVVPTLDRALEV 69
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18629.5841.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L1B9_9PHAE3.260e-11693.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2XYW7_9STRA9.170e-547.73Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18629contigEcto-sp13_S_contig18629:212..2817 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18629.5841.1mRNA_Ecto-sp13_S_contig18629.5841.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18629 212..2817 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18629.5841.1 ID=prot_Ecto-sp13_S_contig18629.5841.1|Name=mRNA_Ecto-sp13_S_contig18629.5841.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=196bp
NPHTPHPGRAPDSPLSDIVELRDLLIPSKPVVAMFPVGVGCGGTVDGLAA
ESGSGLFGLPENAGVFQIGTNVTHAGRPDGRPFRLVDVQPRPVEDIVSDL
KSKFGMALHMEVEYSRRFEGCHHGTETGRSGDSSSDNEEGPGSEESRSPL
PPKADVSWAHILAQNQHKLQGLDEWETIRDSQIKPSVMRALDVSD*
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