prot_Ecto-sp13_S_contig1861.5832.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1861.5832.1
Unique Nameprot_Ecto-sp13_S_contig1861.5832.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length543
Homology
BLAST of mRNA_Ecto-sp13_S_contig1861.5832.1 vs. uniprot
Match: D8LEK5_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK5_ECTSI)

HSP 1 Score: 568 bits (1464), Expect = 7.350e-199
Identity = 342/380 (90.00%), Postives = 345/380 (90.79%), Query Frame = 0
Query:  168 EENYVDSRNGTTRPGELLVADGGMLSPPAVLDVCALYGRSNPSLVVGLLRSLGELDARAAGLSSLAEDLEKAVLAAAGALAEVHAKMAGAQDGLGLGPPIDHTEASDVLSYVTDVAVSVGSLLQASCGARAVGSXXXXXXXXXXXXXXIGLLAQRLQGSDGEVSPEGLAAALALTFEATLPALEGVLLAPISSGKVGAPDSESVRARGRVARQWLLRCLHGLIGPVFLQPLGLQEASPSAAGSGXXXXAGDVGVADGLFSFVTSVTAASGHLAPTGYAGSLLGEYNHRFRLADALDQAQALGTQPIPP---LPPSEKQRTPRVGLAPGKVLGPECTEYLTGVLRALPVSEEGVSKEAXXXXXXXXXXXXXX-MSAALGMG 543
            E+NY DSRN  TRP ELLVADG MLSPPAVLD+CALYGRSNPSLVVGLLRSLGELD  AAG+SSLAE LEKAVLAAAGALAEVHAKMAGAQDGLGLGPPIDHTEASDVLSYVTDVAVSVGSLLQAS G RAVGS  XXXXXXXXX   IGLLAQRLQGSDGEVSPEGLAAALALTFEATLPALEG LLAP SSGKVGAPDSESVRARGRVARQWLLRCLHGLIGPVFLQPLGLQEASPS AGSG    AGD GVADGLFSFVTSVTAASGHLAPTGYAGSLLGEYN RFRLADALDQAQALGTQPIPP      SEKQRTPRVGLAPG VLGPE TEYLTGVLRALPVSEEGVSKEAXXXXXXXXXXXXX  MSAAL MG
Sbjct:    5 EDNYADSRNSATRPAELLVADGSMLSPPAVLDMCALYGRSNPSLVVGLLRSLGELDGGAAGVSSLAEGLEKAVLAAAGALAEVHAKMAGAQDGLGLGPPIDHTEASDVLSYVTDVAVSVGSLLQASSGVRAVGSSGXXXXXXXXXG--IGLLAQRLQGSDGEVSPEGLAAALALTFEATLPALEGFLLAPTSSGKVGAPDSESVRARGRVARQWLLRCLHGLIGPVFLQPLGLQEASPSVAGSGDGDGAGDAGVADGLFSFVTSVTAASGHLAPTGYAGSLLGEYNRRFRLADALDQAQALGTQPIPPHXXXXXSEKQRTPRVGLAPGLVLGPERTEYLTGVLRALPVSEEGVSKEAXXXXXXXXXXXXXRAMSAALDMG 382          
BLAST of mRNA_Ecto-sp13_S_contig1861.5832.1 vs. uniprot
Match: A0A6H5L6J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6J2_9PHAE)

HSP 1 Score: 475 bits (1223), Expect = 1.140e-158
Identity = 264/304 (86.84%), Postives = 267/304 (87.83%), Query Frame = 0
Query:  218 SLGELDARAAGLSSLAEDLEKAVLAAAGALAEVHAKMAGAQDGLGLGPPIDHTEASDVLSYVTDVAVSVGSLLQASCGARAVGSXXXXXXXXXXXXXXIGLLAQRLQGSDGEVSPEGLAAALALTFEATLPALEGVLLAPISSGKVGAPDSESVRARGRVARQWLLRCLHGLIGPVFLQPLGLQEASPSAAGSGXXXXAGDVGVADGLFSFVTSVTAASGHLAPTGYAGSLLGEYNHRFRLADALDQAQALGTQPIPPLPPSEKQRTPRVGLAPGKVLGPECTEYLTGVLRALPVSEEGVSKEA 521
            SLGELD  AAG+SSLAE LEKAV AAAGALAEVHAKMAGAQDGLGLGPPIDHTEASDVLSYVTDVAVSVGSLLQASCG RAVGS              IGLLAQRLQGSDGEVSPEGLAAALALTFEATLPALE  LLAP SSGKVGAPDSESVRARGRVARQWLLRCLHGLIGPVFLQPLGLQEASPS AGS     AG  GVADGLFSFVTSVTAASGHLAPTGYAG+LLGEYN  F LADALDQAQALGTQPIPP  PSEKQRTPRVGL+PG VLGPE TEYLTGVLRALPVSEEGVSKEA
Sbjct:    2 SLGELDGGAAGVSSLAEGLEKAVFAAAGALAEVHAKMAGAQDGLGLGPPIDHTEASDVLSYVTDVAVSVGSLLQASCGVRAVGSGAGGG---------IGLLAQRLQGSDGEVSPEGLAAALALTFEATLPALESFLLAPTSSGKVGAPDSESVRARGRVARQWLLRCLHGLIGPVFLQPLGLQEASPSVAGSWDGDGAGHAGVADGLFSFVTSVTAASGHLAPTGYAGALLGEYNRCFHLADALDQAQALGTQPIPPQSPSEKQRTPRVGLSPGAVLGPERTEYLTGVLRALPVSEEGVSKEA 296          
BLAST of mRNA_Ecto-sp13_S_contig1861.5832.1 vs. uniprot
Match: A0A836CBT6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT6_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.050e-21
Identity = 141/473 (29.81%), Postives = 190/473 (40.17%), Query Frame = 0
Query:   77 ISRANAELGRLLDVGFPTFLSFVLEDESLAKFIDTFLRFRRRHYESTAVGQLQQXXXXXPSEEPAPLQELGRRVFLVLLRAVGPEHASLAKEENYVDSRNGTTRPGELLVADGGMLSPPAVLDVCALYGRSNPSLVVGLLRSLG----ELDARAAG-------------------------LSS--------------------LAEDLEK------------AVLAAAGALAEVHAKMAGAQ---------------DGLGLGPPIDHTEASDVLSYVTDVAVSVGSLLQASCGARAVGSXXXXXXXXXXXXXXIGLLAQRLQGSDGEVSPEGLAAALALTFEATLPALEGVLLAPISSGKVGAPDSESVRARGR----VARQWLLRCLHGLIGPVFLQPLGLQEASPSAAGSGXXXXAGDVGVADGLFSFVTSVTAASGHLAPTGYAGSLLGEYNHRFRLADALDQAQALG 469
            +++AN+ LG LL + FP F S VL+D  L +F+DTFLR RRR +E     +++         E   L +L RRV  +LLR VGPE A+L ++ +           G  L    G+LS PA+LDVCA+YG +N +L+ GL  +L     EL A AA                          LSS                     AE L              A    A A AEVHA+ +                               A+D+  YV DVA ++  L  A CG                      L A+ LQ    ++  EGL AALALT+EATLPALE  L     +            ARGR    VAR+ LL+ +  L+  + L P+   E     A +           ++GL +F          +A  G  G+LLG Y   F LA  L  A A+G
Sbjct:  234 VAQANSALGALLLLPFPDFSSIVLQDSGLGQFLDTFLRHRRRQHEL----EVRSNPAEFTGPESQALVQLTRRVLALLLRLVGPEVAALEQQLHVTPGAPAARAYGGALT-QSGLLSVPALLDVCAIYGVANANLLRGLFAALAALRPELPAEAAAXXXXXXXXXXXXXXXXXXXVVADANLSSERKLPAAAVXXXXXXXXXXXXAEALRARARPRRAGCAGPAAPRRAAAAAEVHAQCSALSAPXXXXXXXXXXXXXXXXXXXXXXXXDTAADLAMYVVDVAATLLQL--ARCGGA--------------------LAARALQA---KLEGEGLCAALALTYEATLPALERALAVTSVTX-----XXXXXAARGRRACLVARRQLLQLVGELVETLNLAPMDSVEVDVEVAEA----------ASEGLLAFALXXXXXXXXVAEGGRVGALLGGYASFFGLAKRLRAAAAVG 661          
BLAST of mRNA_Ecto-sp13_S_contig1861.5832.1 vs. uniprot
Match: A0A176VWQ8_MARPO (CUE domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VWQ8_MARPO)

HSP 1 Score: 64.3 bits (155), Expect = 4.800e-7
Identity = 51/207 (24.64%), Postives = 91/207 (43.96%), Query Frame = 0
Query:   10 LETQRDRSGKALNMAAGSASWRGLCKQHSKVPPLKLVPFLPQDNNTADMSSRSGQAGSSSGSSSGNTISRANAELGRLLDVGFPTFLSFVLEDESLAKFIDTFLRFRRRHYESTAVGQLQQXXXXXPSEEPAPLQELGRRVFLVLLRAVGPEHASLAKEENYVDSRNGTTRPGELLVADGGMLSPPAVLDVCALYGRSNPSLVVGLL 216
            ++   D+  K ++ +  S+S  G   +         VP+LPQD+  A ++    + G    + +       N +L  LL +    F   V+ DESL+ F+D++L FRRR ++S      +        +      +L RR F+VLLR            E+       + +    ++ +  +L  P ++D+CA+YG  NP L   L+
Sbjct:   99 MKPNSDQGAKTISNSIRSSSGVGGGSRSGMAVEQSFVPYLPQDD--AILAGLGEREGGVDAAETQEVTDLLNEQLSALLCLPPRQFWKKVVTDESLSVFLDSYLHFRRRWFDSPLGSPSESKVGVVAGDG-----DLSRRTFMVLLRMSSNSDPGTPPSESL------SAKEHAAILKEKKLLDIPKLMDICAIYGHDNPDLTKRLV 292          
BLAST of mRNA_Ecto-sp13_S_contig1861.5832.1 vs. uniprot
Match: A0A7I4D300_PHYPA (CUE domain-containing protein n=5 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4D300_PHYPA)

HSP 1 Score: 62.8 bits (151), Expect = 1.410e-6
Identity = 60/194 (30.93%), Postives = 88/194 (45.36%), Query Frame = 0
Query:   28 ASWRGLCKQHSKVPPLKL----VPFLPQDNNTADMSSRSGQAGSSSGSSSGNTISRANAELGRLLDVGFPTFLSFVLEDESLAKFIDTFLRFRRRHYESTA-VGQLQQXXXXXPSEEPAPLQELGRRVFLVLLRAVGPEHASLAKEENYVDSRNGTTRPGELLVADGGMLSPPAVLDVCALYGRSNPSLVVGLL 216
            A+ RG   +HS     KL    +P+LPQD+  A  +    + G    S +   +   N +L  LL    P F   V  DESL  FID +L FRRR Y+STA +   +Q       +      +L RRVF++L R    +   L   +        + +    L+ D  +LS P +LD+CA+Y   N  L   L+
Sbjct:  101 AAPRGNEVKHSAFSAAKLQGLFLPYLPQDDAVA--AGLGEKDGGIDASEAQEVVDYLNQQLAFLLRCPPPEFWQKVTMDESLDTFIDNYLHFRRRWYDSTAFITSSKQTAGVIVGDG-----DLSRRVFMLLYRISTHQEPGLPSRQCL------SAKEHAGLLKDFKLLSLPKLLDICAVYEHDNHELTSRLV 281          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1861.5832.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LEK5_ECTSI7.350e-19990.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L6J2_9PHAE1.140e-15886.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CBT6_9STRA1.050e-2129.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A176VWQ8_MARPO4.800e-724.64CUE domain-containing protein n=2 Tax=Marchantia p... [more]
A0A7I4D300_PHYPA1.410e-630.93CUE domain-containing protein n=5 Tax=Physcomitriu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21494:SF0ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2coord: 43..219
NoneNo IPR availablePANTHERPTHR21494ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100coord: 43..219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1861contigEcto-sp13_S_contig1861:8004..12589 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1861.5832.1mRNA_Ecto-sp13_S_contig1861.5832.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1861 8004..12589 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1861.5832.1 ID=prot_Ecto-sp13_S_contig1861.5832.1|Name=mRNA_Ecto-sp13_S_contig1861.5832.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=543bp
SNYCTGRGGLETQRDRSGKALNMAAGSASWRGLCKQHSKVPPLKLVPFLP
QDNNTADMSSRSGQAGSSSGSSSGNTISRANAELGRLLDVGFPTFLSFVL
EDESLAKFIDTFLRFRRRHYESTAVGQLQQQQQQQPSEEPAPLQELGRRV
FLVLLRAVGPEHASLAKEENYVDSRNGTTRPGELLVADGGMLSPPAVLDV
CALYGRSNPSLVVGLLRSLGELDARAAGLSSLAEDLEKAVLAAAGALAEV
HAKMAGAQDGLGLGPPIDHTEASDVLSYVTDVAVSVGSLLQASCGARAVG
SGGGGGGGGSGSGGGIGLLAQRLQGSDGEVSPEGLAAALALTFEATLPAL
EGVLLAPISSGKVGAPDSESVRARGRVARQWLLRCLHGLIGPVFLQPLGL
QEASPSAAGSGDGDGAGDVGVADGLFSFVTSVTAASGHLAPTGYAGSLLG
EYNHRFRLADALDQAQALGTQPIPPLPPSEKQRTPRVGLAPGKVLGPECT
EYLTGVLRALPVSEEGVSKEAEAEAEAAAAAGARAMSAALGMG
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