mRNA_Ecto-sp13_S_contig1860.5826.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1860.5826.1
Unique NamemRNA_Ecto-sp13_S_contig1860.5826.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1860.5826.1 vs. uniprot
Match: D7FU50_ECTSI (CBF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU50_ECTSI)

HSP 1 Score: 531 bits (1368), Expect = 8.160e-177
Identity = 277/292 (94.86%), Postives = 279/292 (95.55%), Query Frame = 1
Query:   13 RKRHQAFGDAWLACLRLPLPPALYRRVLLFLPGNVIPYMPSPLRLADFLTAAYGLGGVRSVLALDALFLLMQAHDLDYPDFYDSLYRLVTPDMMYAKYRARFFRMVDLCLTSSHVPAYVVAAFLKRFARATLQAPPSGALFTLALVRKLIGRHPECLPLISSRAPAVSDSKHRLLTSSGALSGTTGLKNRPLPSSDGSAPGGAASPPAGAAVDGGAADEYDPGCEDTKGAGAMKTSLWELAALQNHYHPGVATLARGFLREADKKEAEGEAFAGPSKLAAETYQSLFDQEMR 888
            R   +AFGDAWLACLRLPLPPALYRRVLLFLPGNVIPYMPSP+RLADFLTAAYGLGGVRSVLALDALFLLMQAHDLDYPDFYDSLYRLVT DMMYAKYRARFFRMVDLCLTSSHVPAYVVAAFLKRFARATLQAPPSGALFTLALVRKLIGRHPECLPLISSRAPAVSDSKHRLLTSSGALSGTTGLKNRPLPSSDGSA GGAAS     AVDGGAADEYDPGCEDTKGAGAM TSLWELAALQNHYHPGVATLARGFLREADKKEAEGEAFAGPSKLAAETYQSLFDQ  R
Sbjct:  491 RYHKKAFGDAWLACLRLPLPPALYRRVLLFLPGNVIPYMPSPVRLADFLTAAYGLGGVRSVLALDALFLLMQAHDLDYPDFYDSLYRLVTSDMMYAKYRARFFRMVDLCLTSSHVPAYVVAAFLKRFARATLQAPPSGALFTLALVRKLIGRHPECLPLISSRAPAVSDSKHRLLTSSGALSGTTGLKNRPLPSSDGSATGGAASXXXXXAVDGGAADEYDPGCEDTKGAGAMNTSLWELAALQNHYHPGVATLARGFLREADKKEAEGEAFAGPSKLAAETYQSLFDQAGR 782          
BLAST of mRNA_Ecto-sp13_S_contig1860.5826.1 vs. uniprot
Match: A0A7S1CDG6_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CDG6_9STRA)

HSP 1 Score: 206 bits (525), Expect = 9.370e-56
Identity = 133/324 (41.05%), Postives = 185/324 (57.10%), Query Frame = 1
Query:   16 KRHQAFGDAWLACLRLPLPPALYRRVLLFLPGNVIPYMPSPLRLADFLTAAYGLGGVRSVLALDALFLLMQAHDLDYPDFYDSLYRLVTPDMMYAKYRARFFRMVDLCLTSSHVPAYVVAAFLKRFARATLQAPPSGALFTLALVRKLIGRHPECLPLISSRAPAVSDSKHRLLTSSGALSGTTGLKNRPLPSSDGSAPGGAASPPAGAAVDGGAADEYDPGCEDTKGAGAMKTSLWELAALQNHYHPGVATLARGFLREADKKEAEGEAFAGPSKLAAETYQSLFDQEMRRKMGTTVP-LAFRRPKGLFDDVPEEGGGVFAAV 984
            K  +AF DAWLA +R PLPP ++R+ LL LP  +IP+M  PL L DFLT +Y  GGV ++LAL  L++L+  H+LDYPDFY +LYRL+TP  M AK+RARF  +++L L+SSH+P Y+VAAF+KR AR +L +PP+ A+F +  +  L+ RHP C+ ++        D       + G ++            SD    GGAA        DG   D +    +D K   A+ +SLWE+ AL +HY P VA+LA  F  + +K     + F+      A TY+SLF+ E +RK       LA   P  LF     EGG VFA +
Sbjct:  242 KLRRAFEDAWLAMMRRPLPPDVFRKTLLLLPKRIIPHMLHPLLLCDFLTDSYDEGGVVALLALHGLWVLISQHNLDYPDFYPALYRLLTPATMLAKHRARFLNLLNLFLSSSHLPVYIVAAFIKRIARLSLSSPPAVAIFAVPFMYNLLKRHPACVSMVHR------DEDEPKTAAEGGVA------------SDSEDEGGAAXXXX-XXTDGPGNDPFIEDEDDMKKCKALDSSLWEVDALLHHYTPAVASLASVFKTKMNKVPYTVDDFS------AYTYKSLFEAEFKRKSAQRDQHLAVAAPAALF-----EGGDVFAEI 535          
BLAST of mRNA_Ecto-sp13_S_contig1860.5826.1 vs. uniprot
Match: A0A7S2JY12_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JY12_9STRA)

HSP 1 Score: 197 bits (502), Expect = 1.680e-53
Identity = 128/330 (38.79%), Postives = 178/330 (53.94%), Query Frame = 1
Query:   16 KRHQAFGDAWLACLRLPLPP-----ALYRRVLLFLPGNVIPYMPSPLRLADFLTAAYGL--GGVRSVLALDALFLLMQAHDLDYPDFYDSLYRLVTPDMMYAKYRARFFRMVDLCLTSSHV-PAYVVAAFLKRFAR-ATLQAPPSGALFTLALVRKLIGRHPECLPLISSRAPAVSDSKHRLLTSSGALSGTTGLKNRPLPSSDGSAPGGAASPPAGAAVDGGAADEYDPGCEDTKGAGAMKTSLWELAALQNHYHPGVATLARGFLREADKKEAEGEAFAGPSKLAAETYQSLFDQEMRRKM-------GTTVPLAFRRPKGLF--DDV 951
            K  +    AWL  L++   P     A+++R L  LP +VIP+M +PLRLAD+LTAAY    GGV S+LAL  LF+LM  ++L+YP FY SLY L+ P   YA+YR RF R+++ CL SS++ P ++VAAF KR  R A +  PPSG LF L+LV  L+ +HP C  L+  +A   SD                                          +D    D +DPGC+D +   A+++SLWEL+AL+ HYHP V++LA+   +E +K           ++  + TY+SLFDQE+  K            PLAF  PKGLF  DD+
Sbjct:  169 KHRRILSQAWLYILQINTAPGSNNKAVHKRALQHLPKHVIPHMHAPLRLADYLTAAYSSDGGGVMSLLALHGLFILMTEYNLEYPKFYSSLYALIKPAAFYARYRTRFLRLLNSCLMSSYMLPGHIVAAFCKRLCRTALIGIPPSGVLFVLSLVSNLVRKHPVCRCLVYRKAGDESD-----------------------------------------VMD----DVFDPGCDDPEECRALESSLWELSALEKHYHPSVSSLAKTCGKEDNKSP-----LYDLNEFVSLTYKSLFDQELNEKKLAKKSASSKVTPLAFHEPKGLFPEDDI 448          
BLAST of mRNA_Ecto-sp13_S_contig1860.5826.1 vs. uniprot
Match: A0A1Z5JIV6_FISSO (U3 small nucleolar RNA-associated protein 19 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JIV6_FISSO)

HSP 1 Score: 200 bits (508), Expect = 1.680e-53
Identity = 123/310 (39.68%), Postives = 163/310 (52.58%), Query Frame = 1
Query:   28 AFGDAWLACLRLPLPPALYRRVLLFLPGNVIPYMPSPLRLADFLTAAYGLGGVRSVLALDALFLLMQAHDLDYPDFYDSLYRLVTPDMMYAKYRARFFRMVDLCLTSSHV-PAYVVAAFLKRFARATLQAPPSGALFTLALVRKLIGRHPECLPLISSRAPAVSDSKHRLLTSSGALSGTTGLKNRPLPSSDGSAPGGAASPPAGAAVDGGAADEYDPGCEDTKGAGAMKTSLWELAALQNHYHPGVATLARGFLREADKKEAEGEAFAGPSKLAAETYQSLFDQEMRRKMGT----TVPLAFRRPKGLF 942
            A+  AWLA L+L LPP   ++ L FLPGNV+P +P PLR +DF   AY  GGV SVLALD LFLL+  H L+YP+FY  LYRL+TP ++Y KYR RFFR++D CLT + + P +VVAAF+KR  R TL AP    LF LAL   L+ +  E   L+       +D + +                                            D +D   +D + A A+++SLWE+ AL+ HY+P V+TLA+   RE +                A TYQSLF+QE  ++       TVPL F RP  LF
Sbjct:  271 AWSKAWLAMLKLDLPPIALKKALRFLPGNVLPLVPHPLRFSDFFMEAYNHGGVVSVLALDGLFLLITTHGLEYPNFYKQLYRLITPSLLYVKYRTRFFRLLDKCLTRNEMLPTHVVAAFVKRLLRCTLVAPVPSVLFVLALCSNLLRKRLEMACLVHR-----NDDEWK--------------------------------------------DGFDAETDDPEEANALQSSLWEICALERHYYPAVSTLAKSVGREQELSTP----LYNLDDFLAHTYQSLFEQERNKRKQQKGKGTVPLTFVRPDSLF 527          
BLAST of mRNA_Ecto-sp13_S_contig1860.5826.1 vs. uniprot
Match: A0A226N954_CALSU (CBF domain-containing protein n=1 Tax=Callipepla squamata TaxID=9009 RepID=A0A226N954_CALSU)

HSP 1 Score: 194 bits (493), Expect = 7.740e-53
Identity = 120/306 (39.22%), Postives = 165/306 (53.92%), Query Frame = 1
Query:   25 QAFGDAWLACLRLPLPPALYRRVLLFLPGNVIPYMPSPLRLADFLTAAYGLGGVRSVLALDALFLLMQAHDLDYPDFYDSLYRLVTPDMMYAKYRARFFRMVDLCLTSSHVPAYVVAAFLKRFARATLQAPPSGALFTLALVRKLIGRHPECLPLISSRAPAVSDSKHRLLTSSGALSGTTGLKNRPLPSSDGSAPGGAASPPAGAAVDGGAADEYDPGCEDTKGAGAMKTSLWELAALQNHYHPGVATLARGFLREADKKEAEGEAFAGPSKLAAETYQSLFDQEMRRKMGTTVPLAFRRPKGLF 942
            QAF   WL  L+  LP  LY++VL+ L  +++PYM  P  + DFLTAAYG+GG  S+LAL+ LF+L+  H+L+YPDFY  LY L+ P + + KYRARFF + DL L+SSH+PAY+VAAF+KR +R  L APP   L  +  +  L  RHP C  L+           HR               N P   S+                     D Y    E+   + A+++SLWEL +LQNHYHPGVA  A    +   + E +    +G  +L+A     +FD+E++ K    VPL F R +GLF
Sbjct:  128 QAFERMWLTFLKHQLPSGLYKKVLVILHDSILPYMNEPTLMIDFLTAAYGVGGAISLLALNGLFILIHQHNLEYPDFYKKLYSLLDPSIYHVKYRARFFHLADLFLSSSHLPAYLVAAFIKRLSRLALTAPPEALLMVIPFICNLFRRHPACKVLV-----------HR--------------PNGPQDLSE---------------------DPYIMEQEEPSESRALESSLWELQSLQNHYHPGVAQAAAILNQSLSELEDD---ISGLLELSA---SEIFDKEIK-KTSANVPLEFERVRGLF 380          
BLAST of mRNA_Ecto-sp13_S_contig1860.5826.1 vs. uniprot
Match: A0A210QDA1_MIZYE (Nucleolar complex protein 4-like B n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210QDA1_MIZYE)

HSP 1 Score: 197 bits (501), Expect = 8.520e-53
Identity = 122/309 (39.48%), Postives = 163/309 (52.75%), Query Frame = 1
Query:   13 RKRHQAFGDAWLACLRLPLPPALYRRVLLFLPGNVIPYMPSPLRLADFLTAAYGLGGVRSVLALDALFLLMQAHDLDYPDFYDSLYRLVTPDMMYAKYRARFFRMVDLCLTSSHVPAYVVAAFLKRFARATLQAPPSGALFTLALVRKLIGRHPECLPLISSRAPAVSDSKHRLLTSSGALSGTTGLKNRPLPSSDGSAPGGAASPPAGAAVDGGAADEYDPGCEDTKGAGAMKTSLWELAALQNHYHPGVATLARGFLREADKKEAEGEAFAGPSKLAAETYQSLFDQEMRRKMGTTVPLAFRRPKGL 939
            ++  + F  +W+  L   LP  LYRR L+ L   V+PYM SPL L DFLT +Y +GG  S+LAL+ +F+L+Q ++LDYPDFY  LY L  P + +AKYRARFF + DL LTS+H+PAY+V AF KR AR +L APPSG   ++  +  LI RHP C  L+           HR         G + + +                            D YDP   D     AM++SLWEL  LQ+H+HP VA  A+    E    E +       S L   +Y  LFD+E R+K+   VP+ F  PKGL
Sbjct:  245 KEHKRLFTTSWVTFLAFQLPTNLYRRTLVILHDKVMPYMTSPLMLCDFLTESYNIGGAISLLALNGIFVLVQQYNLDYPDFYGKLYALFEPSVFHAKYRARFFYLADLFLTSTHLPAYLVGAFAKRLARISLAAPPSGLTVSIPFIYNLIHRHPNCRVLL-----------HR-------TEGPSEIHD----------------------------DPYDPNEPDPTKCHAMESSLWELKTLQSHFHPDVARSAQRIDGEIQTIETD------LSDLFETSYDDLFDKETRKKV-KFVPVNFETPKGL 500          
BLAST of mRNA_Ecto-sp13_S_contig1860.5826.1 vs. uniprot
Match: A0A699YWQ0_HAELA (CBF domain-containing protein n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699YWQ0_HAELA)

HSP 1 Score: 196 bits (498), Expect = 1.330e-52
Identity = 133/324 (41.05%), Postives = 181/324 (55.86%), Query Frame = 1
Query:   13 RKRHQAFGDAWLACLRLPLPPALYRRVLLFLPGNVIPYMPSPLRLADFLTAAYGLGGVRSVLALDALFLLMQAHDLDYPDFYDSLYRLVTPDMMYAKYRARFFRMVDLCLTSSHVPAYVVAAFLKRFARATLQAPPSGALFTLALVRKLIGRHPECLPLISSRAPAVSDSKHRLLTSSGALSGTTGLKNRPLPSSDGSAPGGAASPPAGAA-VDGGAADEYDPGCEDTKGAGAMKTSLWELAALQNHYHPGVATLARGFLREADKKEAEGEAFAGPSKLAAETYQSLFDQEMRRKMGTTVPLAFRR--PKGLFDD--VPEEGGG 969
            +   ++F +AWLA L LP+P  L R+VLL +  +VIP M +P  LADFLT A   GG+  +LAL+ +FLL+  H L+YP F+  LY L+T D   AK RA+FF +VD+ L S  VPAY  AAF+KRFAR +LQAPP+GAL  +A +  LI RHP C+ ++   +   S   H      G + G        LP      PG +  P AG +   G   D Y  G ED   + A+++SLWE+ AL+ H+ P VATL     ++   +    E   GP  L + +Y SLF QE+ R++   VP+AF    P  LF    V EE  G
Sbjct:  181 KSHKRSFTEAWLAVLSLPIPDDLLRKVLLRIHESVIPNMLNPNSLADFLTYALDQGGLTGILALNGIFLLVTQHRLEYPAFFQRLYNLLTVDAFAAKQRAQFFALVDIFLASPMVPAYTAAAFIKRFARLSLQAPPAGALLAVAFIHNLIRRHPACMTMLHRPSQPASTPAHADAGGEGDVRG--------LP------PGSSMQPAAGKSDPQGPGCDVYLEGEEDPAKSRAVESSLWEVEALRTHFCPQVATLTAVLDKDLGDRVKTSEVDLGP--LLSASYASLFSQEVERRI-KQVPVAFYNSPPSHLFSSSAVAEEWPG 487          
BLAST of mRNA_Ecto-sp13_S_contig1860.5826.1 vs. uniprot
Match: A0A397HJB3_9GLOM (CBF domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397HJB3_9GLOM)

HSP 1 Score: 199 bits (505), Expect = 1.850e-52
Identity = 121/316 (38.29%), Postives = 166/316 (52.53%), Query Frame = 1
Query:   25 QAFGDAWLACLRLPLPPALYRRVLLFLPGNVIPYMPSPLRLADFLTAAYGLGGVRSVLALDALFLLMQAHDLDYPDFYDSLYRLVTPDMMYAKYRARFFRMVDLCLTSSHVPAYVVAAFLKRFARATLQAPPSGALFTLALVRKLIGRHPECLPLISSRAPAVSDSKHRLLTSSGALSGTTGLKNRPLPSSDGSAPGGAASPPAGAAVDGGAADEYDPGCEDTKGAGAMKTSLWELAALQNHYHPGVATLARGFLREADKKEAEGEAFAGPSKLAAETYQSLFDQEMRRKMGTTVP----LAFRRPKGLFDDVPEE 960
            + F D WLA L+LP+   LY++VLL +   +IPYM  P+ L DFLT +Y  GG  S+LAL+ LF L+  H+LDYPDFY  LY L   ++M+ KYRARFFR+VDL L+S+H+P  +VA+F+KR +R +L +PP G +  + ++  LI RHP C+ LI           HR   S+ + S  +                                D YD    D   + A+ +SLWE+  LQNHY P +ATLA+ F  +  K     E F         TY SLF+ E +R      P    LAF +PK +F  V  E
Sbjct:  339 RVFSDCWLALLKLPMTQELYKKVLLIMHKKIIPYMSQPIMLMDFLTESYNAGGAISILALNGLFTLINEHNLDYPDFYKKLYNLFDRNLMHVKYRARFFRLVDLFLSSTHLPVQLVASFIKRMSRLSLTSPPHGIVIIMPMIYNLIRRHPSCMVLI-----------HRPSDSTSSTSDES--------------------------------DPYDFDEPDPMKSNAIDSSLWEMKTLQNHYFPNIATLAKIFQEKFTKISYNLEDFLD------HTYTSLFETETKRNKSKKNPKKLALAFEKPKLVFPVVENE 605          
BLAST of mRNA_Ecto-sp13_S_contig1860.5826.1 vs. uniprot
Match: A0A662WG64_9STRA (CBF domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WG64_9STRA)

HSP 1 Score: 198 bits (504), Expect = 2.250e-52
Identity = 139/329 (42.25%), Postives = 189/329 (57.45%), Query Frame = 1
Query:   16 KRHQ-AFGDAWLACLRLPLPPALYRRVLLFLPGNVIPYMPSPLRLADFLTAAYGLGGVRSVLALDALFLLMQAHDLDYPDFYDSLYRLVT-PDMMYAKYRARFFRMVDLCLTSSHVPAYVVAAFLKRFARATLQAPPSGALFTLALVRKLIGRHPECLPLISSRAPAVSDSKHRLLTSSGALSGTTGLKNRPLPSSDGSAPGGAASPPAGAAVDGGAADEYDPGC---EDTKGAGAMKTSLWELAALQNHYHPGVATLARGFLREADKKEAEGEAFAGPSKLAAETYQSLFDQEMRRKMGTTVPLAFRRPKGLF---DDVPEEGGGVFA 978
            K+HQ AF  AW+A LR  LP A Y++VL+ LP +++P++ +PL LADFLT +Y +GGV S+LAL++LF+L+Q ++ D PDFY+ LY L+  P ++ AK R RFF ++DL L+S+H+PAY+VAAF KR +R+ L A P   LF + +V  LI RH ECL LI           HR    +GA S       R    S  SA   AA   +G   D    D +DP     +D     A+++SLWEL  ++ HY+  VA  AR F      +E     F         TY+SLFDQ+++RK    VPLAF+  K LF   DD   E   VFA
Sbjct:  310 KQHQHAFSLAWIATLRHKLPQAAYKKVLVQLPDDIMPHLANPLLLADFLTDSYNIGGVTSLLALNSLFILIQDYNFDSPDFYNKLYALLDDPSLLTAKQRGRFFGLLDLFLSSTHLPAYMVAAFAKRLSRSALTAEPGAILFIIPMVYNLILRHKECLQLI-----------HR----TGAFSAAEKASKRREELSSSSAVDAAAKKLSGEKTDIVLKDGHDPFVSEEQDPIKCNALQSSLWELHTMKLHYNADVALKARMF------EEKLRHQFLDLDDSLDITYKSLFDQQLKRKAKGKVPLAFQPCKALFTAGDDDEAEHEDVFA 617          
BLAST of mRNA_Ecto-sp13_S_contig1860.5826.1 vs. uniprot
Match: A0A1Y2BF24_9FUNG (CBF-domain-containing protein n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2BF24_9FUNG)

HSP 1 Score: 197 bits (500), Expect = 3.040e-52
Identity = 118/305 (38.69%), Postives = 164/305 (53.77%), Query Frame = 1
Query:   13 RKRHQAFGDAWLACLRLPLPPALYRRVLLFLPGNVIPYMPSPLRLADFLTAAYGLGGVRSVLALDALFLLMQAHDLDYPDFYDSLYRLVTPDMMYAKYRARFFRMVDLCLTSSHVPAYVVAAFLKRFARATLQAPPSGALFTLALVRKLIGRHPECLPLISSRAPAVSDSKHRLLTSSGALSGTTGLKNRPLPSSDGSAPGGAASPPAGAAVDGGAADEYDPGCEDTKGAGAMKTSLWELAALQNHYHPGVATLARGFLREADKKEAEGEAFAGPSKLAAETYQSLFDQEMRRKMGTTVPLAFRR 927
            +   Q FGDAWLA L+LPL   +Y+RVLL +   +IP+M +P+RL DFLT AY  GG  S+LAL+ LF LM  H+LDYP+F+  LY L   D+M+ KYR+RFFR+VDL  TSSH+PAY+VAAF+K+ AR  L APPSG +  L L+  L+ RHP C+ +I           HR             LK                             D++D   +D   +GAM++SLWEL AL+ HY+  +A+L   F  +   +  + E F         TY S  + E+ +K+     +A  +
Sbjct:  268 KSHSQVFGDAWLAFLKLPLTVPIYKRVLLIINKRIIPFMTNPVRLIDFLTDAYNEGGAVSLLALNGLFTLMNEHNLDYPEFFTKLYALFDNDLMHIKYRSRFFRLVDLFFTSSHMPAYIVAAFIKKMARLALYAPPSGVVIVLPLIYSLMKRHPSCMVMI-----------HR----------EGNLKT----------------------------DKFDMNEKDPLKSGAMESSLWELNALRKHYYGDLASLGDIFTSDFKNEPYDLEDFLD------RTYSSFVETELNKKVKKAPAMAIMK 517          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1860.5826.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU50_ECTSI8.160e-17794.86CBF domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S1CDG6_9STRA9.370e-5641.05Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S2JY12_9STRA1.680e-5338.79Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A1Z5JIV6_FISSO1.680e-5339.68U3 small nucleolar RNA-associated protein 19 n=2 T... [more]
A0A226N954_CALSU7.740e-5339.22CBF domain-containing protein n=1 Tax=Callipepla s... [more]
A0A210QDA1_MIZYE8.520e-5339.48Nucleolar complex protein 4-like B n=1 Tax=Mizuhop... [more]
A0A699YWQ0_HAELA1.330e-5241.05CBF domain-containing protein n=1 Tax=Haematococcu... [more]
A0A397HJB3_9GLOM1.850e-5238.29CBF domain-containing protein n=1 Tax=Diversispora... [more]
A0A662WG64_9STRA2.250e-5242.25CBF domain-containing protein n=2 Tax=Nothophytoph... [more]
A0A1Y2BF24_9FUNG3.040e-5238.69CBF-domain-containing protein n=1 Tax=Neocallimast... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1860contigEcto-sp13_S_contig1860:10572..15385 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score464.9
Seed ortholog evalue2.7e-128
Seed eggNOG ortholog2880.D7FU50
Preferred nameNOC4L
Model size1687
KEGG koko:K12767,ko:K14771
KEGG Pathwayko04113,ko04138,ko04213,map04113,map04138,map04213
Hectar predicted targeting categorysignal peptide
GOsGO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000472,GO:0000478,GO:0000479,GO:0000480,GO:0000966,GO:0000967,GO:0000981,GO:0003674,GO:0003700,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006355,GO:0006357,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016072,GO:0019219,GO:0019222,GO:0022613,GO:0030490,GO:0030684,GO:0030686,GO:0030688,GO:0030689,GO:0030692,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032040,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140110,GO:1901360,GO:1903506,GO:1990904,GO:2000112,GO:2001141
Exons5
EggNOG free text desc.maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
EggNOG OGsKOG2154@1,KOG2154@2759
EC2.7.11.1
Cds size876
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1860.5826.1prot_Ecto-sp13_S_contig1860.5826.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1860 11257..15259 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462954.469595-UTR-Ecto-sp13_S_contig1860:10571..112561681462954.469595-UTR-Ecto-sp13_S_contig1860:10571..11256Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1860 10572..11256 -
1681462954.5423355-UTR-Ecto-sp13_S_contig1860:15259..153851681462954.5423355-UTR-Ecto-sp13_S_contig1860:15259..15385Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1860 15260..15385 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462954.4873607-CDS-Ecto-sp13_S_contig1860:11256..113791681462954.4873607-CDS-Ecto-sp13_S_contig1860:11256..11379Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1860 11257..11379 -
1681462954.4960432-CDS-Ecto-sp13_S_contig1860:11770..118751681462954.4960432-CDS-Ecto-sp13_S_contig1860:11770..11875Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1860 11771..11875 -
1681462954.5104642-CDS-Ecto-sp13_S_contig1860:12647..130231681462954.5104642-CDS-Ecto-sp13_S_contig1860:12647..13023Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1860 12648..13023 -
1681462954.5213823-CDS-Ecto-sp13_S_contig1860:13734..139041681462954.5213823-CDS-Ecto-sp13_S_contig1860:13734..13904Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1860 13735..13904 -
1681462954.531822-CDS-Ecto-sp13_S_contig1860:15157..152591681462954.531822-CDS-Ecto-sp13_S_contig1860:15157..15259Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1860 15158..15259 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1860.5826.1

>prot_Ecto-sp13_S_contig1860.5826.1 ID=prot_Ecto-sp13_S_contig1860.5826.1|Name=mRNA_Ecto-sp13_S_contig1860.5826.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=292bp
MPSPLRLADFLTAAYGLGGVRSVLALDALFLLMQAHDLDYPDFYDSLYRL
VTPDMMYAKYRARFFRMVDLCLTSSHVPAYVVAAFLKRFARATLQAPPSG
ALFTLALVRKLIGRHPECLPLISSRAPAVSDSKHRLLTSSGALSGTTGLK
NRPLPSSDGSAPGGAASPPAGAAVDGGAADEYDPGCEDTKGAGAMKTSLW
ELAALQNHYHPGVATLARGFLREADKKEAEGEAFAGPSKLAAETYQSLFD
QEMRRKMGTTVPLAFRRPKGLFDDVPEEGGGVFAAVNFSIS*
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mRNA from alignment at Ecto-sp13_S_contig1860:10572..15385-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1860.5826.1 ID=mRNA_Ecto-sp13_S_contig1860.5826.1|Name=mRNA_Ecto-sp13_S_contig1860.5826.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4814bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1860:10572..15385- (Ectocarpus species13 EcNAP12_S_4_19m)
GCCTACCCGAAACGAAAACGGCACCAGGCGTTCGGCGACGCGTGGCTGGC CTGCCTTCGACTGCCCCTCCCGCCGGCCCTGTACCGCAGGGTGCTGCTCT TCCTCCCCGGCAACGTGATCCCGTATATGCCTTCCCCTTTGAGGCTGGCG GACTTCTTGACGGCGGCGTACGGCCTGGGCGGGGTGCGGTCGGTACTGGC GCTCGACGCCCTGTTCCTTCTCATGCAGGTGGGTGGGTGTGTTTGTTGTT TGCATCGACCGCCGCTGAACAGTGAAAGGACGTCAGTCTCAGCGCGGTTG CAAACAGAAAATGCTGCTAAAGGCTACTATATGATGTGGGATCAGGCGTG TGCGCGTGTATGTTTAATGTGTGCATTGACCGCACTAGTCAAAAAAAGAA TGTCAGCCTCAGCGGCGGGCGGCTGATCATTGAAAGACATCGGTGTCAGT GCGACTTAACCGGCTGACCAATGAAAGAGACGTCTGGGTCAGTGCGGCGG AATACAGAAAATGTTGCTATTACTATTTTACCAGGTGTGTGCGTGGTTGA TTACCATTTGATCTGAGGGTGGCGCAGACGGCGGTGTCATTGCTGGCGTG GTGGTGATTGATGTGGTTGCCGCTGTGGTTTCAGGCTGAAGTCGGGGTGT TGTTTATGCTGGCGTTGGAGAGCTGTTCAGTACTTGGTAGTTGTGACGCA GGCTCCCTAGTGCCACAGGCAGCACCGTGACAGAGAGACGCAAGGGGTGT TCAGACCGCCCCGCCCCCCTCACATGGGTTGCTCCGCCTGTCCTAGTTTC TTTGCCGCTGAGAACATCCGGCCAAGGCCTTTGTCGCCCCCGATGCTTGG TCCCATCGAAGACCTCCACGACTTGCAATAATGTCAGCTGAACGGAGGCT TCCATGATAGCATTAGCATCACTATCCCCTTTGCACCGTTTGGAGACGGA AACCTTGAAACGATATAGCTTATCGTGGAGGGACGGGGTTGACAAGATTT CACGGGTTACGATAGCGGAGAGGGGAAGAGTGTTGAAATTGGAATCAAGA ATCTTGGTACGCCGGTGCGTGCCAGCTGCCGGGAACCCACCGAACGAAAG CAGCGGAAAGGGGGGCACGGTCTGACTCTGCTGTCATCCAGCCACGGCCG CAATGTCAGCAGGGTACCGAGTTCGGTAACCTTAGTGACGTTAACGGTTC ACCACCCCACCCTCCTCGTCTCCGTAGATGTTATCTCTTTCCAGTGCCCG ATGAGAATGGCATCTCTTTCCTGTGCCGTTCGAAATGGATACCTTCCCAA TTGCGAGGGTCAACGGATGTTTCCCCGCGGAGCTAAATGGATCTGTTCCC TCGCCATGCTCAACGGATCTTTCCCCGAGAAGCTCCACGGATCTATCCCC GGGAAACTCAAGAGATGTTTCTCCGCACATTCCGCCCTTTGCTCGAACGC ACCTAAACCTCCCGACGATCTCCCGAAACAGGCGCACGACCTGGACTACC CCGACTTCTACGACTCGCTGTACCGGCTGGTGACACCCGACATGATGTAC GCTAAGTACCGCGCGAGGTTCTTCCGCATGGTGGACCTCTGCCTGACCTC CTCGCACGTGCCCGCTTACGTCGTCGCTGCCTTCCTGAAGAGGTTTGCCA GGTGAGGAGGCGTTAATTTTTTTCGGGAGGGGGGGGCAAGCGTTTCCTCT CGCGGAGCCCCGGGTTACCTAATAGTGTTGGAAGGGGAGGTGAGTCGGTT GTCATCGACATCAATTCGCTTGACCCTGGAAGACCTCGGCTGCTCGACTG GAAAAAAACGTTTGTGTCACAACGTACGCCCAAGTCACGTCACTGACATC TAGTTTGTACCAGAGCACAACCGATGCAAAATTCTTTTTGAACGCCACAC CTCTCTCCATTTTGGGCAGTATTTTGTCGTCCTACGATCTTTTGCTGCAG CCCCGCCGTGGGTGTTGGCCTCCTTTTCTTGTAGAGCCAGTCTCGAAGAT GTCCCTCTTTTGCTACCGCCGCTCATGACCCTGAGTACTCCCCACTTGTC TCCTCACCACGACCCAGAGACCATCGACCCCCCCACTCCGTGCTCTGTCC TCTCGAGAGGGCACGAGGTCAACGTTCTAACTAACAACGGCATGCGTTTA CATGAGTACCCCCCCCCCCCCCCCCCCCCCCCTGTCCTCGCGTTTTTTTT TTTTTTCCTCATCCAACACCCACGCCCCCCCCCCCCNNNNNNNNNNCCCC CCGCGCGCCCCCCGGCCCACCGTTTTCCCCCACCACGGCGCGCGTTTACT TCAGTCCCCCCCCCCCCCCCCCCTCCTCCGGTTGTTGCCACGTTTTTTTT TGCCCGCGACAGAGCCACGCTCCAGGCCCCTCCTTCCGGGGCCCTCTTCA CCCTCGCCCTCGTCCGAAAGCTCATCGGAAGGCACCCCGAGTGCCTGCCG CTCATCAGCAGCAGGGCGCCCGCGGTCTCGGACTCCAAGCACCGCCTCCT TACATCTTCGGGGGCCCTCAGCGGCACCACCGGCCTCAAGAACCGCCCTC TTCCCTCGTCCGATGGTAGCGCTCCCGGCGGGGCTGCATCCCCCCCCGCG GGGGCTGCCGTGGATGGGGGCGCTGCGGACGAGTACGACCCAGGGTGCGA GGATACCAAGGGGGCCGGGGCCATGAAGACGAGCTTGTGGGAGCTTGCGG CGCTGCAGAATCACTATCATCCCGGGGTAGCCACACTGGTGAGAACGGGG GTAATCATGCCGTTGTCGTTGGACCACTGACCTCGCATCCGTACGAAGCC GGGACGGAGCACGCCGGGTTCTCATGAAGCGCAGAGCGCCGTAGCGGGGG GTAGGAGAACTTGTGGATGGAGGGGATTGTCTTTTCGGAGGGCGTTGGGG CCGCTTTGGATCCTATTAGGCGTTTGTTGTGATGTGGTTTGATTTTGTGT TGTTAATTTTGTTTCTCACCGACAGCGAAAGTAGCCTACCTCGTCATTGG TGAGGTTGTGTTCGTGGGGAAGGCCGAACTCAGCTCCCCGCTGGTGGTGG TGCTGGGCTACAAAAATTGATGGACCCACGTATCCAAGGAGTTTCGAACG TCACAAGAGAGTGGTGGCGGTTGTGTGCAAGTTTGAACGGCCATGAGCTC TGTCGTCACGATCATGTTCTCATGTCAACAGAAATGCTCAATAGTGAAAC ACCGCAATGAATAGGGAGGACAACATGTATTCTTCCGCCGAATTTACACG CGTCGTGTTGGCAAAAAAGGGGCTCAACAACTTCATCGGAAGCTTCCACC GGACCCGGTAGCTGTAGACTGATCTGTTCGTTTCTGTAAGGACCGCGTTT TCGATCACTGATTTTTTTTCAATCGTTTTTGTACTTGTCTTTCAAAAACA ACCGGTATCGTATATTCATTCTCTGTACTCTATCCACAGAACAGAGGATC GAGGACAAACGGTGGTAATTATTTCATAGCAGTGATGCATTGACCTACCC GTGTTTCTAGGCTCGAGGGTTTCTCCGTGAGGCGGACAAGAAGGAAGCAG AGGGCGAGGCCTTCGCGGGACCGTCCAAGCTCGCGGCGGAGACATACCAG TCTCTCTTCGATCAGGTGAGCAAGAGAGAGAGAAAGAGAGAAGAGAGAGA GGGAGAGAGAGAGCCGAGATGAGTCTTCTGACCGGTTGTCTGACGAGGTT ACCTTATTTTCTGTGGCATTCGCCGAACGGGCGGTATATTTTGGGTTGGA AGCTGATTTGTTTGGATTCCTTTTCGCATGATTTTTGTACATGCCGCAAT TATTTCGCTTGAGCTCTCTTTTTGACTCAAGCACCACGTTTACGTTTCTT GGCGACAGACAAACGTCTCTGTAAATATCATTTTGTTTTTGACAGCAGTA CGGATATTAGAAGGTACCGATCGGAGACCGGAACGGTTTTTGATGTGAAG ACAACCACGCCCCCCGTTCTGTCCCGGCGTTCTCTTTCGTGACGTACGTG CACCAGGAAATGCGCCGCAAGATGGGAACTACTGTTCCCCTCGCGTTCCG CCGCCCCAAGGGGCTCTTCGACGATGTCCCCGAGGAAGGCGGAGGCGTGT TTGCGGCCGTGAACTTCTCCATATCTTGATTGCCACCTGAGTAGCGGTGA TTTGGTTACTCTTTGGGCTATGAGTTCCACTGCCGGTCATTCGACGGCGA ATAAGTGCCATAGTAGTTTGCTGAGTGAAACGACGCGTATTGCACCTCCA ACTTTGTTGTTGTTGTAGTCTGGCAACTGTCACGTACATGAAGCTTTCAA GGCAGCAGCACAGCTGTTCGGAATCACGCAAGCGTTCGTGTTCGAGATTT GTTCCAAAAAAATTTTTTGCGCCAATGTCGTCTTGTCGGTGAGTTGACGG CGATGTGCTTGAACACCACACTTGTCTGGGGGAGTTATCGTTGACTGGCA TCGCAGCTTGCCTCGGACAACGGTGCTGGTCCTCCAAGAGATTTTCGTTT TTTTATCAAGGTGGTGTAGAGAGCAGTGAAGGAAGCGATGAAGATTCGCA CAAAAAGTAGTGTGATAAATCTTGTTGCATCCTCAGGACGACGGTCAGGG CAAGAAAAAACGTTAGGTAGTCCATAAACATAGTTTAGATGGACAACACC TAATACTCAGTCTGATGCAGAGGGAACAGACGAGGGTAAGATTTTCTGTG CTGCGTGCAAAACTACGCGCATTGGGTTGTTACAAAATTGGAGAGCAACA GCTGTGACAAATCCGCATGCCTTGGACTGAGGGAAAGCGTGTTTTGCATG TCTTCGCACGTTCC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1860:10572..15385-

>mRNA_Ecto-sp13_S_contig1860.5826.1 ID=mRNA_Ecto-sp13_S_contig1860.5826.1|Name=mRNA_Ecto-sp13_S_contig1860.5826.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=876bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1860:10572..15385- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCTTCCCCTTTGAGGCTGGCGGACTTCTTGACGGCGGCGTACGGCCT
GGGCGGGGTGCGGTCGGTACTGGCGCTCGACGCCCTGTTCCTTCTCATGC
AGGCGCACGACCTGGACTACCCCGACTTCTACGACTCGCTGTACCGGCTG
GTGACACCCGACATGATGTACGCTAAGTACCGCGCGAGGTTCTTCCGCAT
GGTGGACCTCTGCCTGACCTCCTCGCACGTGCCCGCTTACGTCGTCGCTG
CCTTCCTGAAGAGGTTTGCCAGAGCCACGCTCCAGGCCCCTCCTTCCGGG
GCCCTCTTCACCCTCGCCCTCGTCCGAAAGCTCATCGGAAGGCACCCCGA
GTGCCTGCCGCTCATCAGCAGCAGGGCGCCCGCGGTCTCGGACTCCAAGC
ACCGCCTCCTTACATCTTCGGGGGCCCTCAGCGGCACCACCGGCCTCAAG
AACCGCCCTCTTCCCTCGTCCGATGGTAGCGCTCCCGGCGGGGCTGCATC
CCCCCCCGCGGGGGCTGCCGTGGATGGGGGCGCTGCGGACGAGTACGACC
CAGGGTGCGAGGATACCAAGGGGGCCGGGGCCATGAAGACGAGCTTGTGG
GAGCTTGCGGCGCTGCAGAATCACTATCATCCCGGGGTAGCCACACTGGC
TCGAGGGTTTCTCCGTGAGGCGGACAAGAAGGAAGCAGAGGGCGAGGCCT
TCGCGGGACCGTCCAAGCTCGCGGCGGAGACATACCAGTCTCTCTTCGAT
CAGGAAATGCGCCGCAAGATGGGAACTACTGTTCCCCTCGCGTTCCGCCG
CCCCAAGGGGCTCTTCGACGATGTCCCCGAGGAAGGCGGAGGCGTGTTTG
CGGCCGTGAACTTCTCCATATCTTGA
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