mRNA_Ecto-sp13_S_contig186.5823.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig186.5823.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE) HSP 1 Score: 382 bits (982), Expect = 1.190e-130 Identity = 176/208 (84.62%), Postives = 190/208 (91.35%), Query Frame = 1
Query: 1 KWFTMMRHPIARLISAFYYCSGGTRDQLCAANIHRPEDGDIYDFAEHWGNYALLQFALGVVDQHEILAEDVDAPAWYKAKLYFEGLLGYPGSTSSTTKHTAHDEWQSVWIPKLLQPVEELLRSNYAAVGITEHWQNSMTLFDHALEMPGLNWTVASASLAPQKSQNQMKEKKAALATAMTDPVLRQCVWLDMLLYEYACSLHKEQLSR 624
KWFTMMRHPIARLISAFYYCSGG RDQLCAANIH+PEDGDIYDFA+HWGNYALLQFALGVVDQHEI AE+VDAPAW+KAKLYFEG LGYPG+ S+ T T HDEWQSVWIP +LQPVEELLRSNYAAVGI EHWQ SM LFDHALE+PG NWTVASASL+P+KSQN++ EKKA LA AMTDPVLRQ VWLD+LLYEYACSLH+EQL R
Sbjct: 109 KWFTMMRHPIARLISAFYYCSGGNRDQLCAANIHKPEDGDIYDFAKHWGNYALLQFALGVVDQHEIFAEEVDAPAWFKAKLYFEGRLGYPGNMSTATNRTTHDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNWTVASASLSPRKSQNKIVEKKAMLAAAMTDPVLRQYVWLDLLLYEYACSLHEEQLRR 316
BLAST of mRNA_Ecto-sp13_S_contig186.5823.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE) HSP 1 Score: 278 bits (711), Expect = 1.410e-89 Identity = 129/208 (62.02%), Postives = 158/208 (75.96%), Query Frame = 1
Query: 1 KWFTMMRHPIARLISAFYYCSGGTRDQLCAANIHRPEDGDIYDFAEHWGNYALLQFALGVVDQHEILAEDVDAPAWYKAKLYFEGLLGYPGSTSSTTKHTAHDEWQSVWIPKLLQPVEELLRSNYAAVGITEHWQNSMTLFDHALEMPGLNWTVASASLAPQKSQNQMKEKKAALATAMTDPVLRQCVWLDMLLYEYACSLHKEQLSR 624
KWFTM+RHPIARL+SAF YC DQLCA IH+PEDGDIYDFAEHWGN+ ++QFAL D ++IL +V +P WYKAKLYFEG LG G TS++ + D Q+VW+P++LQPVEELLRS YAAVGI E W+ SM LFDHAL++PG NWT SAS P ++ + K K L +MTDPVL+Q +WLD+LLYE+ACS+HK QLSR
Sbjct: 110 KWFTMVRHPIARLVSAFNYCGIVPSDQLCATRIHKPEDGDIYDFAEHWGNHGVVQFALAFEDLNDILVTEVKSPPWYKAKLYFEGRLGPSGKTSTSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNWTSTSASSTP-RNVHDSKAKNDLLVASMTDPVLKQILWLDILLYEHACSVHKAQLSR 316
BLAST of mRNA_Ecto-sp13_S_contig186.5823.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI) HSP 1 Score: 165 bits (417), Expect = 1.360e-45 Identity = 93/236 (39.41%), Postives = 129/236 (54.66%), Query Frame = 1
Query: 1 KWFTMMRHPIARLISAFYYCSGGTRDQLCA--ANIHRPEDGDIYDFAEHWGNYALLQFALGVVDQHEILAEDV---------------DAPAWYKAKLYF----------EGLLGYPGSTSSTTKHTAHDEWQSVWIPKLLQPVEELLRSNYAAVGITEHWQNSMTLFDHALEMPGLNWTVASASLAPQKSQNQMKEKKAA-LATAMTDPVLRQCVWLDMLLYEYACSLHKEQLSR 624
KWFT+ RHPI RL+SA++YC +D LCA A +D D+Y FAEHWG++ L QFAL V E+LA V P WY+ KLY EG G+ GS ++ + + I LLQPV+ELL + YAAVG+ E W+ S+ LF+ AL MPG +W S+ + S ++A L + TDP LR+ + LD+LLY+YA S+H +Q+ +
Sbjct: 70 KWFTIFRHPIPRLVSAYFYCKKKPQDGLCATVALDANADDTDLYAFAEHWGDFGLRQFALAFVLPEELLANKVKYDATGICTPYHGKRSCPGWYELKLYLQQQLDEQEQGEGSRGWDGSGAAASG--------AATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKKNSDGTFHNEEAEMLLRSWTDPRLRRYLSLDLLLYDYAVSVHNQQVDK 297
BLAST of mRNA_Ecto-sp13_S_contig186.5823.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI) HSP 1 Score: 151 bits (382), Expect = 5.430e-39 Identity = 87/225 (38.67%), Postives = 124/225 (55.11%), Query Frame = 1
Query: 1 KWFTMMRHPIARLISAFYYCSGGTRDQLCAANIHRPEDGDIYDFAEHWGNYALLQFALGVVD----QHEILAEDVDA---------PAWYKAKLYFE----GLLGYPGSTSSTTKHTAHDEWQSVWIP--KLLQPVEELLRSNYAAVGITEHWQNSMTLFDHALEMPGLNWTVASASLAPQKSQNQMKEKKA-ALATAMTDPVLRQCVWLDMLLYEYACSLHKEQ 615
++FT+ RHPIAR++SA++YC D CA+ + +D D+ FA+HWGN+A+ QFALG V Q I + A WY+ K+Y E G G PG + + T HD ++ P LLQP +L+RS Y AVGI E W ++ LFDHALE+PG+ W A Q+ + K ++ L A TD L++ + LD+LLYE+A + EQ
Sbjct: 232 RFFTLFRHPIARMVSAYFYCRSTLGDAACASEVVDAKDVDLLTFAKHWGNFAVRQFALGFVPSDGVQEYIRTPEAQALHDFDLKKIAGWYQLKMYLERPEKGDWGVPGQSEAMT--VEHDAAATLEAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRLESETLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQ 454
BLAST of mRNA_Ecto-sp13_S_contig186.5823.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE) HSP 1 Score: 145 bits (367), Expect = 8.300e-38 Identity = 81/225 (36.00%), Postives = 118/225 (52.44%), Query Frame = 1
Query: 1 KWFTMMRHPIARLISAFYYCSGGTRDQLCAANIHRPEDGDIYDFAEHWGNYALLQFALGVVD-----QHEILAE---------DVDAPAWYKAKLYFEGLLGYPGSTSSTTKHTAHDEWQSVWIPKLLQPVEELLRSNYAAVGITEHWQNSMTLFDHALEMPGLNWTVASASLAPQKSQNQMKE--KKAALATAMTDPVLRQCVWLDMLLYEYACSLHKEQLSRL 627
KWFT+ RHP++R++SA++YC DQLCAA + D+ FAEHWGNY L QFAL + +E+++E DV PAWY+ K Y L + T+ + + + L +E L + YAAVGI E W NSM LF+ L + +W + S E K+AL A P L++ +WLD+LLY++A S+H+ Q++ L
Sbjct: 124 KWFTVFRHPVSRVVSAYFYCQRAHHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHNEVVSEFCQQARGHGDVCIPAWYRQKHYLH--LPHQDDFCGPTQPESG-------LAQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSGKKNSGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADL 339
BLAST of mRNA_Ecto-sp13_S_contig186.5823.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI) HSP 1 Score: 144 bits (362), Expect = 1.400e-36 Identity = 79/222 (35.59%), Postives = 113/222 (50.90%), Query Frame = 1
Query: 1 KWFTMMRHPIARLISAFYYCSGGTRDQLCAANIHRPEDGDIYDFAEHWGNYALLQFALGVVDQHEI---------------LAEDVDA-PAWYKAKLYFEGLLGYPGSTSSTTKHTAHDEWQSVWIPKLLQPVEELLRSNYAAVGITEHWQNSMTLFDHALEMPGLNWTVASASLAPQKSQNQMK-EKKAALATAMTDPVLRQCVWLDMLLYEYACSLHKEQ 615
+WFT+ RHP++RL+SA+YYC DQLCA+ + D+ FA HWGN+AL QFALG V ++ AE V+ P WY KL+ G TS + + + +PV +LLR NYA VGI E W +++LFD AL+MPG+ W + K EK+ L A++DP + + + LD+ LY A + +Q
Sbjct: 169 RWFTVFRHPVSRLVSAYYYCREDPSDQLCASEFVSSRNVDLVTFARHWGNFALRQFALGFVSHDKVKDFLVSPNGGGAMGLTAEQVELMPGWYMLKLFLNDRSGVADDTSP----------EGTRLEYMFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLNVDTRFKGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQ 380
BLAST of mRNA_Ecto-sp13_S_contig186.5823.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI) HSP 1 Score: 139 bits (351), Expect = 1.540e-34 Identity = 78/210 (37.14%), Postives = 115/210 (54.76%), Query Frame = 1
Query: 1 KWFTMMRHPIARLISAFYYCSGGTRDQLCAANIHRPEDGDIYDFAEHWGNYALLQFALGVVDQHEILAEDVDAPAWYKAKLYFEGLL----GYPGSTSSTTKHTAHDEWQSVWIPKLLQPVEELLRSNYAAVGITEHWQNSMTLFDHALEMPGLNWTVASASLAPQKSQNQMKEKKA-ALATAMTDPVLRQCVWLDMLLYEYACSLHKEQ 615
++FT+ RHPIAR++SA++YC + D CA+ + + +D D+ FA+HWGN+AL QFALG V ++DV Y+ K+Y E G G + T H + +LLQP +L+R Y AVGI E W ++ LFDH L+MP +NW A K+ + L A TD L++ + LD+LLYE+A + +Q
Sbjct: 253 RFFTLFRHPIARMVSAYFYCRSVSGDVACASEVMQAKDVDLLTFAKHWGNFALRQFALGFVP-----SDDVQE---YQLKMYLERPQKEDGGVLGQREAMTAHQDAAATPDAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQLEIETLQQAWTDSELKKYMRLDLLLYEHAVDVFHQQ 454
BLAST of mRNA_Ecto-sp13_S_contig186.5823.1 vs. uniprot
Match: A0A6H5JUF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUF0_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 3.030e-17 Identity = 66/221 (29.86%), Postives = 99/221 (44.80%), Query Frame = 1
Query: 1 KWFTMMRHPIARLISAFYYCSGGTRDQL-----CAANIHR-PEDGDIYDFA-EHWGNYALLQFALGVVDQHEILAEDVDAPAWYKAKLYFEGLLGYPGSTSSTTKHTAHDEWQSVWIPKLLQPVEELLRSNYAAVGITEHWQNSMTLFDHALEMPGLNWTVASASLAPQKSQNQMKE-KKAALATAMTDPVLRQCVWLDMLLYEYACSLHKEQLSRLVGVD 639
++FTM+RHPI RL+SAF+YC QL C H P + DFA E W N A Q G+ + E + + + + G+ GS + I +LQ V+++L + Y AVGI EHW SM LF+ + P W V Q++ M + L A P + + + DMLLY + S+ K+Q + +G +
Sbjct: 15 QYFTMLRHPIDRLVSAFFYCPTDHDVQLRPRKWCGHEEHPVPATERLLDFAQESWRNQAFKQMTFGLYCPPDTFCEVAEVNNVSQCETFVVGV----GSLDGLREVGPPQMLDEPGILDVLQQVQDIL-AGYTAVGIMEHWDLSMQLFNARVRSPVREWNVFK-----QRNPGVMTGLRDEVLQWAHKSPAIHRVIGTDMLLYSFGLSIFKQQTTASLGTN 225
BLAST of mRNA_Ecto-sp13_S_contig186.5823.1 vs. uniprot
Match: A0A6H5K0M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0M4_9PHAE) HSP 1 Score: 88.2 bits (217), Expect = 6.910e-17 Identity = 68/223 (30.49%), Postives = 100/223 (44.84%), Query Frame = 1
Query: 1 KWFTMMRHPIARLISAFYYCSGGTRDQL-----CAANIHR-PEDGDIYDFA-EHWGNYALLQFALGVVDQHEILAED--VDAPAWYKAKLYFEGLLGYPGSTSSTTKHTAHDEWQSVWIPKLLQPVEELLRSNYAAVGITEHWQNSMTLFDHALEMPGLNWTVASASLAPQKSQNQMKE-KKAALATAMTDPVLRQCVWLDMLLYEYACSLHKEQLSRLVGVD 639
++FTM+RHPI RL+SAF+YC QL C H P + DFA E W N A Q G+ + E+ VD+P +L PG I +LQ V+++L + Y AVGI EHW S+ LF+ + P W V+ Q++ M + L A P + + + DMLLY + S+ K+Q + +G +
Sbjct: 64 QYFTMLRHPIDRLVSAFFYCPTDHDVQLRPRKWCGHEEHPVPATERLLDFAQESWRNQAFKQMTFGLYCPPDTFCEEAEVDSPQ----------MLDEPG------------------ILDVLQQVQDIL-AGYTAVGIMEHWDLSIQLFNARVRSPVREWNVSK-----QRNPGVMTRLRDEVLQWAHKSPAIHRVIGTDMLLYSFGLSIFKQQTTASLGTN 252
BLAST of mRNA_Ecto-sp13_S_contig186.5823.1 vs. uniprot
Match: A0A6H5L5I1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5I1_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 1.160e-16 Identity = 66/220 (30.00%), Postives = 100/220 (45.45%), Query Frame = 1
Query: 1 KWFTMMRHPIARLISAFYYCSG-----GTRDQLCAANIHR-PEDGDIYDFAE-HWGNYALLQFALGVVDQHEILAEDVDAPAWYKAKLYFEGLLGYPGSTSSTTKHTAHDEWQSVWIPKLLQPVEELLRSNYAAVGITEHWQNSMTLFDHALEMPGLNWTVASASLAPQKSQNQMKEKKAALATAMTDPVLRQCVWLDMLLYEYACSLHKEQLSRLVGVD 639
++FT++RHP+ RL+SAF+YC + C H P + D+A+ +W N A Q A G+ H ++ E + + PG DE + +LQ VE++L S Y AVGI EHW SM LF+ + P W + S A S+ + L A PV+ + + DMLLY +A S+ K Q + +G +
Sbjct: 116 EYFTLLRHPVDRLVSAFFYCPKEHDVQSRPPKWCGYADHPLPATDRLLDYAQQYWKNMAYKQMAFGMYCPHGLICEATE-------------VRTAPGL----------DEPHGL---DVLQKVEDIL-SRYTAVGIMEHWDLSMQLFNARVRSPVREWNITQHSNAGLPSEL----RDEVLQWAHDSPVVHRLIATDMLLYSFALSIFKRQTTEALGTN 304 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig186.5823.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig186.5823.1 >prot_Ecto-sp13_S_contig186.5823.1 ID=prot_Ecto-sp13_S_contig186.5823.1|Name=mRNA_Ecto-sp13_S_contig186.5823.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=212bp MMRHPIARLISAFYYCSGGTRDQLCAANIHRPEDGDIYDFAEHWGNYALLback to top mRNA from alignment at Ecto-sp13_S_contig186:17862..18981+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig186.5823.1 ID=mRNA_Ecto-sp13_S_contig186.5823.1|Name=mRNA_Ecto-sp13_S_contig186.5823.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1120bp|location=Sequence derived from alignment at Ecto-sp13_S_contig186:17862..18981+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig186:17862..18981+ >mRNA_Ecto-sp13_S_contig186.5823.1 ID=mRNA_Ecto-sp13_S_contig186.5823.1|Name=mRNA_Ecto-sp13_S_contig186.5823.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=636bp|location=Sequence derived from alignment at Ecto-sp13_S_contig186:17862..18981+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |