mRNA_Ecto-sp13_S_contig18596.5821.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig18596.5821.1
Unique NamemRNA_Ecto-sp13_S_contig18596.5821.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig18596.5821.1 vs. uniprot
Match: D7FN80_ECTSI (ADP-ribose/CDP-alcohol pyrophosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN80_ECTSI)

HSP 1 Score: 656 bits (1693), Expect = 8.900e-235
Identity = 328/348 (94.25%), Postives = 333/348 (95.69%), Query Frame = 1
Query:    1 HRFVLQLGDVIDGSNKAHEKSETALRSVKAEVDRLAASLPLGVLNSLGNHELYNFPKQRWARELDCSSRAKAVTLRPSACGAGAAETIPTPVPSGLRPETDNDQPSAGLPPSDEPLILEASKGAGHEGRGEEEECFYYSFCPVDSYRFIALDSYDVNAIREEPRPDEEDAECSGIDEVAAGDGGGDEGMRVLSKHNPNTNKNDGGGLEGLTKRFVQYNGGIGAKQLLWLENQLTEASRAGQRVVGFGHVPIHPAEPGAHTLIWNYEEVLAVMHKFDCVAMFLSGHRHRETYFRDENGIHHISLAAALEAPSDQEAFASVDVYDSCLELRGHGVVESRVLDLAVPAKVS 1044
            HRFVLQLGDVIDGSNKAH+KSETALRSVKAEVDRLAASLPLGVLNSLGNHELYNFPKQRWARELDCSSRAKAVTLRPSACGAGAAETIPT  PSGL PETDNDQP+  LPPS EPL LEASKGAGHEGRGEE ECFYYSFCPVDSYRFIALDSYDVNAIREEPRPDEEDAE SG +E AAGDG GDEG RVLSKHNPN NKNDGGGLEGLTKRFV+YNGGIGAKQLLWLENQLTEASRAGQRVVGFGHVPIHPAEP AHTLIWNYEEVLAVMHKFDCVAMFLSGHRHRETYFRDENGIHHISLAAALEAPSDQEAFAS+DVYDSCLELRGHGVVESRVLDLAVPAKVS
Sbjct:  116 HRFVLQLGDVIDGSNKAHKKSETALRSVKAEVDRLAASLPLGVLNSLGNHELYNFPKQRWARELDCSSRAKAVTLRPSACGAGAAETIPTLAPSGLLPETDNDQPAGELPPSGEPLTLEASKGAGHEGRGEEAECFYYSFCPVDSYRFIALDSYDVNAIREEPRPDEEDAEGSGKNEAAAGDGRGDEGRRVLSKHNPNRNKNDGGGLEGLTKRFVRYNGGIGAKQLLWLENQLTEASRAGQRVVGFGHVPIHPAEPSAHTLIWNYEEVLAVMHKFDCVAMFLSGHRHRETYFRDENGIHHISLAAALEAPSDQEAFASIDVYDSCLELRGHGVVESRVLDLAVPAKVS 463          
BLAST of mRNA_Ecto-sp13_S_contig18596.5821.1 vs. uniprot
Match: A0A6H5KU83_9PHAE (Metallophos domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU83_9PHAE)

HSP 1 Score: 590 bits (1520), Expect = 1.040e-208
Identity = 296/313 (94.57%), Postives = 299/313 (95.53%), Query Frame = 1
Query:    1 HRFVLQLGDVIDGSNKAHEKSETALRSVKAEVDRLAASLPLGVLNSLGNHELYNFPKQRWARELDCSSRAKAVTLRPSACGAGAAETIPTPVPSGLRPETDNDQPSAGLPPSDEPLILEASKGAGHEGRGEEEECFYYSFCPVDSYRFIALDSYDVNAIREEPRPDEEDAECSGIDEVAAGDGGGDEGMRVLSKHNPNTNKNDGGGLEGLTKRFVQYNGGIGAKQLLWLENQLTEASRAGQRVVGFGHVPIHPAEPGAHTLIWNYEEVLAVMHKFDCVAMFLSGHRHRETYFRDENGIHHISLAAALEAPSDQ 939
            HRFVLQLGDVIDGSNKAH KSETALRSVK EVDRLAASLPLGVLNSLGNHELYNFPKQRWARELDCSSRAKAVTLRPSA GAGAAETIPTPVPSGLRPETD+DQP AGLPPS EPLILEA +GAG+EGRGEE ECFYYSFCPVDSYRFIALDSYDVNAIREEPRPD EDAE SG DE AAGDGGGDEGMRVL KHNPNTNKNDGGGLEGLTKRFVQYNGGIGAKQLLWLENQLTEASRAGQRVVGFGHVPIHPAEPG HTLIWNYEEVLAVMHKFDCVAMFLSGHRHRETYFRD NGIHHISLAAALEAPSDQ
Sbjct:  118 HRFVLQLGDVIDGSNKAHGKSETALRSVKTEVDRLAASLPLGVLNSLGNHELYNFPKQRWARELDCSSRAKAVTLRPSAPGAGAAETIPTPVPSGLRPETDSDQP-AGLPPSGEPLILEAGRGAGYEGRGEEAECFYYSFCPVDSYRFIALDSYDVNAIREEPRPDGEDAEGSGKDEAAAGDGGGDEGMRVLLKHNPNTNKNDGGGLEGLTKRFVQYNGGIGAKQLLWLENQLTEASRAGQRVVGFGHVPIHPAEPGPHTLIWNYEEVLAVMHKFDCVAMFLSGHRHRETYFRDANGIHHISLAAALEAPSDQ 429          
BLAST of mRNA_Ecto-sp13_S_contig18596.5821.1 vs. uniprot
Match: UPI001CF97FB8 (manganese-dependent ADP-ribose/CDP-alcohol diphosphatase n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CF97FB8)

HSP 1 Score: 174 bits (441), Expect = 2.070e-47
Identity = 106/337 (31.45%), Postives = 165/337 (48.96%), Query Frame = 1
Query:    7 FVLQLGDVIDGSNKAHEKSETALRSVKAEVDRLAASLPLGVLNSLGNHELYNFPKQRWARELDCSSRAKAVTLRPSACGAGAAETIPTPVPSGLRPETDNDQPSAGLPPSDEPLILEASKGAGHEGRGEEEECFYYSFCPVDSYRFIALDSYDVNAIREEPRPDEEDAECSGIDEVAAGDGGGDEGMRVLSKHNPNTNKNDGGGLEGLTKRFVQYNGGIGAKQLLWLENQLTEASRAGQRVVGFGHVPIHPAEPGAHTLIWNYEEVLAVMHKFDCVAMFLSGHRHRETYFRDENGIHHISLAAALEAPSDQEAFASVDVYDSCLELRGHGVVESRVL 1017
            F+LQLGD+IDG N  H+ S+ AL++V  E  +  A +     +  GNHE YNF     +R    SS   +  L  S                 + P + N                   +   + G  ++E  + Y FCP  S+RF+ +D YD++ +  E        +CS   +         E ++++ K N N + N+  GL    +RFVQ+NGG+   QL WL+  L+ +    ++V+  GH+P+HP       L+WN+++VLAV++   CV  F++GH H   YF+DE GIHHI+    +E P    AF +V VY   + L+G+G V  RV+
Sbjct:   61 FILQLGDIIDGLNAQHKASKKALKNVMQEFKKSKADIH----HIWGNHEFYNF-----SRHCLMSSALNSQHLGNS-----------------MTPASSN-------------------RVNSNVGEDKQETFYCYDFCPFPSFRFVVIDCYDLSTLGRE--------DCSKKYQ---------ESLKIIRKINKNEDLNNPEGLGAAKQRFVQFNGGLSQDQLEWLDEVLSYSDENQEKVIVVGHIPVHPCAADTICLVWNFDDVLAVLYSHKCVVSFMAGHDHDGGYFQDERGIHHITFEGVIETPPTSHAFGTVFVYKDKMILKGNGRVPHRVM 335          
BLAST of mRNA_Ecto-sp13_S_contig18596.5821.1 vs. uniprot
Match: ADPRM_ARATH (Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase n=13 Tax=Brassicaceae TaxID=3700 RepID=ADPRM_ARATH)

HSP 1 Score: 167 bits (424), Expect = 2.860e-45
Identity = 85/203 (41.87%), Postives = 122/203 (60.10%), Query Frame = 1
Query:  409 YYSFCPVDSYRFIALDSYDVNAI---REEPRPDEEDAECSGIDEVAAGDGGGDEGMRVLSKHNPNTNKNDGGGLEGLTKRFVQYNGGIGAKQLLWLENQLTEASRAGQRVVGFGHVPIHPAEPGAHTLIWNYEEVLAVMHKFDCVAMFLSGHRHRETYFRDENGIHHISLAAALEAPSDQEAFASVDVYDSCLELRGHGVVES 1008
            YY F P   YR + LD YD++A+   +E P              +AA        +++L + NPNT+KN   GLE + +RFV+YNGG+G KQL WL++ L +AS + QRV+  GHVP+ P       L+WN++EV+ ++HK+D V + LSGH H+  YF D +G+HH SL AALE P    +F  +DVYD+ L L G   ++S
Sbjct:  124 YYDFSPTPEYRVVVLDGYDISAVGWPQEHPNT------------IAA--------LKILEEKNPNTDKNSPAGLEDVARRFVKYNGGVGEKQLQWLDSVLQDASNSNQRVIVCGHVPMSPGVASKAALLWNFDEVMNIIHKYDSVKVCLSGHDHKGGYFVDSHGVHHRSLEAALECPPGTYSFGYIDVYDNKLSLVGTDRMQS 306          
BLAST of mRNA_Ecto-sp13_S_contig18596.5821.1 vs. uniprot
Match: UPI001C4CFE81 (manganese-dependent ADP-ribose/CDP-alcohol diphosphatase isoform X1 n=2 Tax=Sceloporus undulatus TaxID=8520 RepID=UPI001C4CFE81)

HSP 1 Score: 164 bits (416), Expect = 1.390e-43
Identity = 109/337 (32.34%), Postives = 160/337 (47.48%), Query Frame = 1
Query:    4 RFVLQLGDVIDGSNKAHEKSETALRSVKAEVDRLAASLPLGVLNSLGNHELYNFPKQRWARELDCSSRAKAVTLRPSACGAGAAETIPTPVPSGLRPETDNDQPSAGLPPSDEPLILEASKGAGHEGRGEEEECFYYSFCPVDSYRFIALDSYDVNAI-REEPRPDEEDAECSGIDEVAAGDGGGDEGMRVLSKHNPNTNKNDGGGLEGLTKRFVQYNGGIGAKQLLWLENQLTEASRAGQRVVGFGHVPIHPAEPGAHTLIWNYEEVLAVMHKFDCVAMFLSGHRHRETYFRDENGIHHISLAAALEAPSDQEAFASVDVYDSCLELRGHGVVESR 1011
            +FVLQLGD+IDG N  ++ SE AL +V  E  +L A     V +  GNHELYNF + R  + L  +   +  TL  S                                 SDE    E +           E C+ Y FCP+  +RFI LD+YD++ + R+      +D+ C                  +L + N N N N    L  +  +FVQ+NGG    QL WL+  LT A +  ++VV  GH+PIHP       L WNY+E L+V+H    V  FL+GH H  +Y  D +G+HH++L   +  P ++ AF ++ VY+  + L+G+G +  R
Sbjct:   75 QFVLQLGDIIDGFNAQYKMSERALETVTKEFQKLKAP----VHHVWGNHELYNFSRDRLMQSLLNTKYLEDQTLLSSLI-------------------------------SDERSTEETAS----------EFCYAYQFCPMPKFRFILLDAYDLSTLGRDTSSKKYQDSLC------------------LLRQKNKNENLNSPEDL--VECQFVQFNGGFSQDQLTWLDEVLTHADKNHEKVVIVGHLPIHPHATNCVCLAWNYKEALSVIHSHHSVVCFLAGHLHYGSYCLDSHGVHHLTLEGIIATPPERNAFGTIYVYNDRMLLKGNGSIPDR 346          
BLAST of mRNA_Ecto-sp13_S_contig18596.5821.1 vs. uniprot
Match: A0A072UPW9_MEDTR (Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase n=1 Tax=Medicago truncatula TaxID=3880 RepID=A0A072UPW9_MEDTR)

HSP 1 Score: 163 bits (412), Expect = 2.530e-43
Identity = 105/330 (31.82%), Postives = 152/330 (46.06%), Query Frame = 1
Query:    1 HRFVLQLGDVIDGSNKAHEKSETALRSVKAEVDRLAASLPLGVLNSLGNHELYNFPKQRWARELDCSSRAKAVTLRPSACGAGAAETIPTPVPSGLRPETDNDQPSAGLPPSDEPLILEASKGAGHEGRGEEEECFYYSFCPVDSYRFIALDSYDVNAIREEPRPDEEDAECSGIDEVAAGDGGGDEGMRVLSKHNPNTNKNDGGGLEGLTKRFVQYNGGIGAKQLLWLENQLTEASRAGQRVVGFGHVPIHPAEPGAHTLIWNYEEVLAVMHKFDCVAMFLSGHRHRETYFRDENGIHHISLAAALEAPSDQEAFASVDVYDSCLELRG 990
            H+FV+ LGD++DG     +   T ++ +  E D+        V + +GNH LYN P+++                                                         +L   K    EG        YY F PV  YRF+ LD YD++AI   P+   + +E                 M+ L + NPN +KN   GL GL +RF+ +NGGIG KQ+ WL N L EA++  Q+VV   H+ ++P       L+WNY+EV+ ++H++DCV +  SGH H+  Y  D +GIHH  L AALE P  ++AF  VDVYD  + L G
Sbjct:   65 HKFVINLGDIVDGFCPKDQSFNT-VKKIVDEFDKFDGQ----VYHLIGNHCLYNLPREK---------------------------------------------------------LLPLLKIHSLEGYA------YYEFSPVPEYRFVVLDGYDISAIGW-PKDHHKTSEA----------------MKFLKEKNPNEDKNSPTGLVGLERRFLMFNGGIGKKQIEWLNNILQEATKLKQKVVVCCHLSLYPGASSKEALLWNYDEVINLIHRYDCVKVCFSGHDHKGGYAIDSHGIHHRVLEAALECPPGRDAFGYVDVYDDRMLLYG 309          
BLAST of mRNA_Ecto-sp13_S_contig18596.5821.1 vs. uniprot
Match: A0A565ASE2_9BRAS (Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase n=1 Tax=Arabis nemorensis TaxID=586526 RepID=A0A565ASE2_9BRAS)

HSP 1 Score: 162 bits (410), Expect = 3.230e-43
Identity = 78/195 (40.00%), Postives = 119/195 (61.03%), Query Frame = 1
Query:  409 YYSFCPVDSYRFIALDSYDVNAIR-EEPRPDEEDAECSGIDEVAAGDGGGDEGMRVLSKHNPNTNKNDGGGLEGLTKRFVQYNGGIGAKQLLWLENQLTEASRAGQRVVGFGHVPIHPAEPGAHTLIWNYEEVLAVMHKFDCVAMFLSGHRHRETYFRDENGIHHISLAAALEAPSDQEAFASVDVYDSCLELRG 990
            YY F P   YR + LD Y+++A+   +  P+  DA                  +R+L + NPN+ KN   GLEG+ +RFV++NG +G KQL WL+N L +A+++ Q+V+  GHVP+ P       L+WN+++V++++HK+D V + LSGH H+  YF D +G+HH SL AALE P    +F  +DVY++ L L G
Sbjct:  124 YYDFSPTPGYRVVVLDGYEISAVGWPQDHPNTIDA------------------LRILEEKNPNSEKNSPAGLEGVERRFVKFNGAVGEKQLQWLDNVLQDATKSNQKVIVCGHVPMSPGASSNEALLWNFDQVMSIIHKYDSVKVCLSGHDHKGGYFVDSHGVHHRSLEAALECPPGTFSFGYIDVYENKLSLVG 300          
BLAST of mRNA_Ecto-sp13_S_contig18596.5821.1 vs. uniprot
Match: UPI0015B2F03B (manganese-dependent ADP-ribose/CDP-alcohol diphosphatase-like isoform X1 n=2 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015B2F03B)

HSP 1 Score: 165 bits (417), Expect = 3.840e-43
Identity = 111/338 (32.84%), Postives = 165/338 (48.82%), Query Frame = 1
Query:    4 RFVLQLGDVIDGSNKAHEKSETALRSVKAEVDRLAASLPLGVLNSLGNHELYNFPKQRWARELDCSSRAKAVTLRPSACGAGAAETIPTPVPSGLRPETDNDQPSAGLPPSDEPLILEASKGAGHEGRGEEEECFYYSFCPVDSYRFIALDSYDVNAIREEPRPDEEDAECSGIDEVAAGDGGGDEGMRVLSKHNPNTNKNDGGGLEGLTKRFVQYNGGIGAKQLLWLENQLTEASRAGQRVVGFGHVPIHPAEPGAHTLIWNYEEVLAVMHKFDCVAMFLSGHRHRETYFRDENGIHHISLAAALEAPSDQEAFASVDVYDSCLELRGHGVVESRVL 1017
            +FVLQLGD+IDG N +   S TAL++     +R  +S+P    +++GNHELYNF +   A +L   S  K                IP  V    +P+ +N             L L A                YY FCPV S + I+LD +D++ +  +        E S I             +  +  HN   + +  G LEGL  RF Q NG +GA+Q+ WL+ +L E+   GQ+V+ FGHV + P       L+WNY+EV+ + H++ CV  + SGH H   Y RD +GI +I     +E P +  AF++V VY+  +E+ GHG+  S +L
Sbjct:  113 KFVLQLGDIIDGLNHSLGGSYTALQNTLEHFER-HSSIP--TFHTVGNHELYNFNRNELA-QLFYESVMKI--------------NIPPEVFCPYKPQKEN-------------LELVAP-------------ILYYKFCPVKSLKCISLDCFDISVLGYDTHHPSY-KEASAI-------------LTTMHGHNVFDDWDCNGTLEGLDVRFQQMNGAVGAEQMEWLDRELKESDELGQKVIVFGHVSLCPDSTDWSCLLWNYDEVMNIFHRYKCVVAYFSGHSHVTGYARDSHGISYIVFTGIVETPPETSAFSTVSVYEDRVEVNGHGLENSYIL 392          
BLAST of mRNA_Ecto-sp13_S_contig18596.5821.1 vs. uniprot
Match: A0A6A2YYL8_HIBSY (Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase n=4 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2YYL8_HIBSY)

HSP 1 Score: 162 bits (410), Expect = 5.460e-43
Identity = 84/217 (38.71%), Postives = 122/217 (56.22%), Query Frame = 1
Query:  343 PLILEASKGAGHEGRGEEEECFYYSFCPVDSYRFIALDSYDVNAIR-EEPRPDEEDAECSGIDEVAAGDGGGDEGMRVLSKHNPNTNKNDGGGLEGLTKRFVQYNGGIGAKQLLWLENQLTEASRAGQRVVGFGHVPIHPAEPGAHTLIWNYEEVLAVMHKFDCVAMFLSGHRHRETYFRDENGIHHISLAAALEAPSDQEAFASVDVYDSCLELRG 990
            PL+  ++ G GH          YY F P   YRF+ LD YD++AI      PD  +A                  +++LS+ NPN+NKN   GL+G  +RFV +NG +G +Q+ WL + L +A+   Q+V+   H+P+ P      TL+WNY++V+ V+H++DCV + L+GH H   Y  D +G+HH  L AALE P   +AF  +DVYDS L L G
Sbjct:  128 PLLKISNHGGGHAHA-------YYDFSPTPGYRFVVLDGYDISAIGWPHDHPDTLEA------------------LKILSEKNPNSNKNSPEGLDGFDRRFVMFNGAVGKEQMEWLSSVLQDATNMKQKVIVCCHLPLDPGATSKTTLLWNYDQVMDVIHRYDCVKVCLAGHNHEGGYSIDSHGVHHRVLDAALECPPGTDAFGYIDVYDSMLSLVG 319          
BLAST of mRNA_Ecto-sp13_S_contig18596.5821.1 vs. uniprot
Match: UPI0001CBA1F0 (manganese-dependent ADP-ribose/CDP-alcohol diphosphatase-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBA1F0)

HSP 1 Score: 160 bits (404), Expect = 3.460e-42
Identity = 80/201 (39.80%), Postives = 123/201 (61.19%), Query Frame = 1
Query:  409 YYSFCPVDSYRFIALDSYDVNAIREEPRPDEEDAECSGIDEVAAGDGGGDEGMRVLSKHNPNTNKNDGGGLEGLTKRFVQYNGGIGAKQLLWLENQLTEASRAGQRVVGFGHVPIHPAEPGAHTLIWNYEEVLAVMHKFDCVAMFLSGHRHRETYFRDENGIHHISLAAALEAPSDQEAFASVDVYDSCLELRGHGVVESR 1011
            YYSF P D YRF+ LD+++++ I  E           G  E        ++ +++L K+N N +KN   G+ G+ +RF+ +NGG+  KQLLWL+  L EASR G+R++  GH+PI+     +  L+WN++ +L V+HK+ CV  ++SGH H   Y  DE G+HH+++   +E P    AFA+VD+Y   + LRG+GVV SR
Sbjct:  137 YYSFTPFDGYRFVILDTFEISLIGSE----------RGSPEF-------NKAVKIL-KNNKNEDKNSSIGISGMDRRFMAFNGGVSEKQLLWLDGVLDEASRNGERIIISGHLPIYEPATESLCLLWNFDSMLDVIHKYKCVMAYISGHDHFGGYAVDEYGVHHVTMEGVIEIPPGSNAFATVDMYQDRMMLRGYGVVASR 319          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18596.5821.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN80_ECTSI8.900e-23594.25ADP-ribose/CDP-alcohol pyrophosphatase n=1 Tax=Ect... [more]
A0A6H5KU83_9PHAE1.040e-20894.57Metallophos domain-containing protein n=1 Tax=Ecto... [more]
UPI001CF97FB82.070e-4731.45manganese-dependent ADP-ribose/CDP-alcohol diphosp... [more]
ADPRM_ARATH2.860e-4541.87Manganese-dependent ADP-ribose/CDP-alcohol diphosp... [more]
UPI001C4CFE811.390e-4332.34manganese-dependent ADP-ribose/CDP-alcohol diphosp... [more]
A0A072UPW9_MEDTR2.530e-4331.82Manganese-dependent ADP-ribose/CDP-alcohol diphosp... [more]
A0A565ASE2_9BRAS3.230e-4340.00Manganese-dependent ADP-ribose/CDP-alcohol diphosp... [more]
UPI0015B2F03B3.840e-4332.84manganese-dependent ADP-ribose/CDP-alcohol diphosp... [more]
A0A6A2YYL8_HIBSY5.460e-4338.71Manganese-dependent ADP-ribose/CDP-alcohol diphosp... [more]
UPI0001CBA1F03.460e-4239.80manganese-dependent ADP-ribose/CDP-alcohol diphosp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18596contigEcto-sp13_S_contig18596:775..3219 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score320.5
Seed ortholog evalue4.6e-85
Seed eggNOG ortholog2880.D7FN80
Preferred nameADPRM
Model size1198
KEGG rclassRC00002
KEGG koko:K01517
KEGG ReactionR00855,R01054
KEGG Pathwayko00230,ko00564,map00230,map00564
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004112,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0008081,GO:0008150,GO:0008152,GO:0008663,GO:0009056,GO:0009987,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0019439,GO:0030145,GO:0034641,GO:0034655,GO:0034656,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0047631,GO:0047734,GO:0055086,GO:0071704,GO:1901360,GO:1901361,GO:1901575
Exons5
EggNOG free text desc.CDP-glycerol diphosphatase activity
EggNOG OGs2QUQW@2759,COG1409@1
EC3.6.1.13,3.6.1.16,3.6.1.53
Cds size483
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18596.5821.1prot_Ecto-sp13_S_contig18596.5821.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig18596 926..2395 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462954.0733883-UTR-Ecto-sp13_S_contig18596:774..9251681462954.0733883-UTR-Ecto-sp13_S_contig18596:774..925Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig18596 775..925 -
1681462954.1217096-UTR-Ecto-sp13_S_contig18596:2395..27701681462954.1217096-UTR-Ecto-sp13_S_contig18596:2395..2770Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig18596 2396..2770 -
1681462954.1299553-UTR-Ecto-sp13_S_contig18596:3030..32191681462954.1299553-UTR-Ecto-sp13_S_contig18596:3030..3219Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig18596 3031..3219 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462954.0863168-CDS-Ecto-sp13_S_contig18596:925..10331681462954.0863168-CDS-Ecto-sp13_S_contig18596:925..1033Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18596 926..1033 -
1681462954.096267-CDS-Ecto-sp13_S_contig18596:1468..16061681462954.096267-CDS-Ecto-sp13_S_contig18596:1468..1606Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18596 1469..1606 -
1681462954.1049466-CDS-Ecto-sp13_S_contig18596:1938..21011681462954.1049466-CDS-Ecto-sp13_S_contig18596:1938..2101Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18596 1939..2101 -
1681462954.1134377-CDS-Ecto-sp13_S_contig18596:2321..23951681462954.1134377-CDS-Ecto-sp13_S_contig18596:2321..2395Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18596 2322..2395 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig18596.5821.1

>prot_Ecto-sp13_S_contig18596.5821.1 ID=prot_Ecto-sp13_S_contig18596.5821.1|Name=mRNA_Ecto-sp13_S_contig18596.5821.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=161bp
MRVLSKHNPNTNKNDGGGLEGLTKRFVQYNGGIGAKQLLWLENQLTEASR
AGQRVVGFGHVPIHPAEPGAHTLIWNYEEVLAVMHKFDCVAMFLSGHRHR
ETYFRDENGIHHISLAAALEAPSDQEAFASVDVYDSCLELRGHGVVESRV
LDLAVPAKVS*
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mRNA from alignment at Ecto-sp13_S_contig18596:775..3219-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig18596.5821.1 ID=mRNA_Ecto-sp13_S_contig18596.5821.1|Name=mRNA_Ecto-sp13_S_contig18596.5821.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2445bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18596:775..3219- (Ectocarpus species13 EcNAP12_S_4_19m)
CACAGATTCGTGCTGCAGTTGGGGGACGTCATCGACGGTAGCAACAAAGC CCACGAGAAGTCCGAGACGGCACTCAGGAGCGTCAAGGCAGAGGTTGACC GCCTCGCAGCCTCGCTGCCCCTTGGCGTGCTCAACAGCCTCGGCAACCAC GAGCTTTACAACTTCCCCAAGCAGCGCTGGGCGCGAGAGGTATGTTAAAT TTCCCTTCGGGCTATTCCATGGGTGCGACATTCGCCACCCTCGTTGGGGA CAAGGAGCACTTTCCCTGCATCTACAAGATAGTTTTCTCCTATTCAGAGC CGTGCACGAGATACAGCAGTCGGTCTCTTGTTGACACCATCCTGTCTGCT CCTTATCAAGCCTCTTTGACCTTCTTGCGGCGCTCGACACCATGAGCCGA AATTTCCATCCCACTCACCGAACCCCGGTCCTCGCTCGTGATGCGTCAGC TGGACTGCTCGAGCCGCGCCAAAGCTGTTACCCTCCGACCCAGCGCTTGC GGTGCCGGCGCAGCCGAGACGATTCCGACGCCCGTCCCGTCCGGGCTTCG TCCGGAAACCGACAACGACCAGCCCTCGGCGGGACTTCCCCCCAGTGACG AGCCGCTGATCCTGGAAGCCAGTAAAGGGGCTGGGCATGAAGGAAGAGGG GAAGAGGAAGAGTGCTTCTACTACAGTTTTTGCCCCGTGGACTCTTACCG ATTCATCGCGCTCGACTCATACGACGTTAACGCGATTCGGGAGGAGCCGC GCCCTGACGAAGAAGATGCTGAGTGTAGCGGAATAGACGAGGTGGCCGCG GGTGATGGTGGGGGCGATGAAGGGATGCGGGTGCTCTCCAAGCACAATCC GAACACGAACAAGAACGACGGGGGCGGGCTAGAGGGCCTCACGAAAAGGT GACCTTAGGCTAGCAAGAGGTATGCCAATGTCTCTCTACCTACCTTCCTG GAGAATGGTTACTAGGAGCAGGAGGGGGAAGGCGAAACGAACCAGGAGCG GTTGCACCGGGATAGCGATCACCCAATCAAAAGATGACCCATCAGTAACG CCCCGTCCGGTCGTGTTTTGTGATTGCGTTAACCAGAGCAATGTCGTTCC TGCTGTTGTTCGACAAAGATTTGTGCAGTACAATGGCGGAATAGGAGCCA AGCAGCTTCTCTGGCTGGAAAACCAGCTCACCGAGGCAAGCCGGGCGGGC CAGCGCGTCGTCGGCTTTGGACACGTTCCCATACATCCGGCGGAGCCAGG CGCGCACACCCTTATCTGGAACTACGAGGAGGTGGGTCGTAAGCGGTAAC AGCAGTCTTACTTTGAGCGGAGATGTGCGGTGTAAGGCGAAAATAATACG ATACAAAACATTTGTTGGCGTATTGAAATCTCGACATGACTGCTGTGTGA GGTTAGCGTACATTCTGCGGCATCATCACTGAGATTCATGATTTTTTTTC GCTTCCACTTTGAGCAACCGTATAATGTTGAACGATGTTCACATGGCGCA ACTCGTCATTACATTCGAAATGTAATACCAGGGACACCTTTATCGAAACC ACGTCCAAGCTTCCCAATCATTTCACACTCGCTCTACCTTCGCCGATTCA CCTATATTTCAAGGTGTTAGCGGTGATGCACAAGTTCGACTGTGTAGCGA TGTTTTTGTCAGGCCATCGCCATAGGGAGACGTACTTCAGGGACGAAAAT GGGATCCACCACATCTCGTTAGCCGCCGCGCTCGAAGCCCCCTCTGATCA GGTGAGTTCATTGTGATGAAATGCTCGTCGAGCGCTTGGTGAAGGGCCAC GACTGGTTTTGCCCGTCCCATCGACCCTTCGCTGACGGCGCACTCAGCAC TATTGGTATGTTTTCATGGACTATATGTTGCAAACCCTGCCGTCCACTTT GTGCAGCAGATATATGCAGTCTTGTCTTCCATCTATCTCGCGACGTTCAC TCCCCTTTTCGGTCGTCCTCGCCCAGCTCCAGCGCTCGTGTGTCGAAAAT GTCCCCCAAATGAGACAATCCGTGCGAGGAATAGAGGAACGAGCTCATGA AGGACAAACTCTGCTCGCGAGCGCCCGTAGGTTGTTCCACTTAAGAAGAG TGTATCCGTCAGCATCTAAGGAAAAGGCCGTGCAAAGTCCTAGAAACCCT GAAGCGGCCCGACAACCCCTTAATTTGACATGACAGGAGGCTTTCGCGAG TGTCGATGTGTACGACAGTTGCTTGGAGCTTCGCGGTCACGGGGTCGTGG AGAGCCGCGTTTTGGATCTCGCTGTTCCCGCGAAAGTATCCTAGGAGCCA GCGGCCCGCGTGACCTGTTCTGTAGAGCGGCGCACTTTCGCGTTGGCAGT TATGTAGAGGTTCAGCTTCTCTATTTGTTTGCAGGCTGACGGTGGGGCGG ATGTGTTATTTCCCTTCGATTAAGAGGGTTCTCTCGTTGCGCCTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18596:775..3219-

>mRNA_Ecto-sp13_S_contig18596.5821.1 ID=mRNA_Ecto-sp13_S_contig18596.5821.1|Name=mRNA_Ecto-sp13_S_contig18596.5821.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=483bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18596:775..3219- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGGGTGCTCTCCAAGCACAATCCGAACACGAACAAGAACGACGGGGG
CGGGCTAGAGGGCCTCACGAAAAGATTTGTGCAGTACAATGGCGGAATAG
GAGCCAAGCAGCTTCTCTGGCTGGAAAACCAGCTCACCGAGGCAAGCCGG
GCGGGCCAGCGCGTCGTCGGCTTTGGACACGTTCCCATACATCCGGCGGA
GCCAGGCGCGCACACCCTTATCTGGAACTACGAGGAGGTGTTAGCGGTGA
TGCACAAGTTCGACTGTGTAGCGATGTTTTTGTCAGGCCATCGCCATAGG
GAGACGTACTTCAGGGACGAAAATGGGATCCACCACATCTCGTTAGCCGC
CGCGCTCGAAGCCCCCTCTGATCAGGAGGCTTTCGCGAGTGTCGATGTGT
ACGACAGTTGCTTGGAGCTTCGCGGTCACGGGGTCGTGGAGAGCCGCGTT
TTGGATCTCGCTGTTCCCGCGAAAGTATCCTAG
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