prot_Ecto-sp13_S_contig1859.5820.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1859.5820.1
Unique Name	prot_Ecto-sp13_S_contig1859.5820.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	1114

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1859.5820.1 vs. uniprot
Match: A0A6H5K1B7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1B7_9PHAE)

HSP 1 Score: 1193 bits (3086), Expect = 0.000e+0
Identity = 779/898 (86.75%), Postives = 794/898 (88.42%), Query Frame = 0

Query:   19 MIHPDRVAPDPTEGWRRGSRGALRKSCDTCTSSKTKCQGSIPCDRCKKRRIECKFSKRRRCGPKARAEDEKRPRTGIEAQQEAGLAIKDSPEHKAAMHQQHAGVPHSPSPPLPPIGTIAGLDSSSXXXXXXXXXXXXXXLPVSSPKFGGPITSDSLSGLVELIAPTLSDTGGSGSSASISXXXXXXISSSCHGGGEAAYSHHAAAASGNNRYAAIPGLNAEGVSPFLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPPSCPVRDLPARAKSMGDTPGGFGQA--EGGGXXXXXXRGVQAGF-PEGSMGNTFMRQQDGGSELRQNASSASGAPLSPQQPLPRRGSLPMTLNGRSKTHLKTFMRTVGSLILLPGADAIRSAVFGDAGGGDPEQLPDAPTAADPGSAEDVGVKREGRPMAAEEDSGIVDVFAEACRAEAWAAAAVGAQFSGASEEECKDYQSRAMRALSRCLDAPLPEVASVMLLFCLFWMHSMETRKVSRYFGFAQQVGLELGSLMPEELRHTIAFVACLVTMTLNLDQVGSFSLQVKEQAVWGVSLRDNSCRPGVDPFVLALTALTVACNEMLHDGAGRGGQGAIGTGGLSPRVAPSKVLTDLLTKAAKALEADARDGDRNPEHVLALLHGLRAYTHAARGEAEDAEASGRLMLAIIDRHAAVLHLPLTFTLAEASRRLLAAAAERSSRRAPEGVHVEALGAAVTKLSFARPTQGVKPGAGGVAXXXXXXXXXWCSFGDDILAAFAAAGGRDIGGDVLSEAANDNRDRPRSGSMSPPARRSVRPLSRAVIASQSWQPTTGGAAMPIPSSSAGGTSGRESSASLPRWSGG 913
            MIHPDRVAPDPTEGWRRGSRG LRKSCDTCTSSKTKCQGSIPCDRCKKRRIECKFSKRRRCGPKARAEDEKRPRTG++AQQ+AGLAIKDSPEHK AMHQQHAGVPH PSP LPPIGTIAGLDSSS              LPVS+PKFGGP+TSDSLSGLVELIAPTLSDTGGSGSSASI+      ISSSCHGGGEAAYSHHAAA SGNNRY AIPGL+AEGVSPFLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   TPPSCPVRDLPARAKSMGDTPGGFGQA      XXXXXX  VQAGF  EGSM NTFMRQQDGGSE RQ+ASSA GAPL  QQ LP RGSLPMTL+GRSKTHLKTFMRTVGSLILLPGADAIRSAVFGDA GGDP+Q PDAP AADPGSAEDVGVKREGRP+AAEED GIVDVFAEACRAEAWAAAAVGAQFSGASEEECKDYQSRAMRAL+RCLDAPLPEVASVMLLFCLFWMHSMETRKVSRYFGFAQQVGLELGSLMPEELRHTIAFVACLVTMTLNLDQVGSFSLQVK+QAVWGVSLRDNSCRPGVDPFVLALTALTVACNEMLHDGAGRGGQGAIG GGLSPRVAPSK                      N E+     H   AYTHAARGEAEDAEASGRLMLAIIDRHAAVLHLPLTFTLAEASRRLLAAAAERSSR  PEGVHVEALGAAVTKLSFARPTQ V+PGAGGVAXXXXXXXXX               GGRDIGGDVLSEA NDNRD PRSGSMSPP RRSVRPLSRAVIASQSWQPTTGGAAMPIPSSSA GTSGRESSASLPRWSGG
Sbjct:    1 MIHPDRVAPDPTEGWRRGSRGPLRKSCDTCTSSKTKCQGSIPCDRCKKRRIECKFSKRRRCGPKARAEDEKRPRTGMDAQQQAGLAIKDSPEHKPAMHQQHAGVPHPPSPSLPPIGTIAGLDSSSNNMTGGGGDG----LPVSNPKFGGPMTSDSLSGLVELIAPTLSDTGGSGSSASITASINASISSSCHGGGEAAYSHHAAAVSGNNRYTAIPGLHAEGVSPFLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---TPPSCPVRDLPARAKSMGDTPGGFGQAGXXXXXXXXXXXXXVQAGFFSEGSMENTFMRQQDGGSEGRQHASSALGAPLPQQQRLPPRGSLPMTLDGRSKTHLKTFMRTVGSLILLPGADAIRSAVFGDASGGDPKQSPDAPIAADPGSAEDVGVKREGRPVAAEEDGGIVDVFAEACRAEAWAAAAVGAQFSGASEEECKDYQSRAMRALARCLDAPLPEVASVMLLFCLFWMHSMETRKVSRYFGFAQQVGLELGSLMPEELRHTIAFVACLVTMTLNLDQVGSFSLQVKDQAVWGVSLRDNSCRPGVDPFVLALTALTVACNEMLHDGAGRGGQGAIGAGGLSPRVAPSK----------------------NNEYPTLPAHA--AYTHAARGEAEDAEASGRLMLAIIDRHAAVLHLPLTFTLAEASRRLLAAAAERSSRPTPEGVHVEALGAAVTKLSFARPTQVVRPGAGGVAXXXXXXXXXXXXX-XXXXXXXXXXGGRDIGGDVLSEATNDNRDPPRSGSMSPPPRRSVRPLSRAVIASQSWQPTTGGAAMPIPSSSADGTSGRESSASLPRWSGG 866

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BLAST of mRNA_Ecto-sp13_S_contig1859.5820.1 vs. uniprot
Match: D8LQH3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH3_ECTSI)

HSP 1 Score: 1161 bits (3003), Expect = 0.000e+0
Identity = 656/765 (85.75%), Postives = 669/765 (87.45%), Query Frame = 0

Query:  350 MGDTPGGFGQAEGGGXXXXXXRGVQAGF-PEGSMGNTFMRQQDGGSELRQNASSASGAPLSPQQPLPRRGSLPMTLNGRSKTHLKTFMRTVGSLILLPGADAIRSAVFGDAGGGDPEQLPDAPTAADPGSAEDVGVKREGRPMAAEEDSGIVDVFAEACRAEAWAAAAVGAQFSGASEEECKDYQSRAMRALSRCLDAPLPEVASVMLLFCLFWMHSMETRKVSRYFGFAQQVGLELGSLMPEELRHTIAFVACLVTMTLNLDQVGSFSLQVKEQAVWGVSLRDNSCRPGVDPFVLALTALTVACNEMLHDGAGRGGQGAIGTGGLSPRVAPSKVLTDLLTKAAKALEADARDGDRNPEHVLALLHGLRAYTHAARGEAEDAEASGRLMLAIIDRHAAVLHLPLTFTLAEASRRLLAAAAERSSRRAPEGVHVEALGAAVTKLSFARPTQGVKPGAGGVAXXXXXXXXXWCSFGDDILAAFAAAGGRDIGGDVLSEAANDNRDRPRSGSMSPPARRSVRPLSRAVIASQSWQPTTGGAAMPIPSSSAGGTSGRESSASLPRWSGGXXXPAGALSSSSCSSAVHRSVLMGSNAAAAPSDWVDRVRKMPTIASSPRASSPNVVQRMGGNGGGNGDDVRSPSPRQEDNNITSPRSMGMLHPGPMPTAAPNVGVKYMSEPRDNLALLSTVAAPGGYNNPPRRASYEDRTGVERQAAVRQRIAGQPGGGGAADRDGGDDLPPPANPGLTTGMSFDPNRDDGTFQFTLGPS 1113
            MGDTPGGFG+A   GXXXXXX  VQAGF P+GSMG+TFMRQQDGGSE RQ+ASSA GAPL  QQ LP R SLPMTL+GRSKTHLKTFMRTVGSLILLPGA AIRSAVFGDAGGGDPEQLPDAPTAADPGSAEDVGVKREGRP+AAEED GIVDVFAEACRAEAWAAAAVGAQFSGASEEECKDYQSRAM ALSRCLDAPLPEVASVMLL CLFWMHSMETRKV+RYFGFAQQVGLELGSLMPEELRHTIAFVACLVTMTLNLDQVGSFSLQVK+QAVWGVSLRDNSCRPGVDPFVLALTALTVACNEMLHDGAGRGGQGAIG GGLSPRVAPSKVLTDLLTKAAKALEADARDG+RNPEHVLALLHGLRA+THAARGEAEDAEASGRLMLAIIDRHAAVLHLPLTFTLAEASRRLLAAAAERSSR APEGVHVEALGAAVTKLSFAR TQ VKPGAGGVAXXXXXXXXX                      DVLSEAANDNRDR RSGSMSPP RRSVRPLSRA IASQSWQPTTGGAAMPIPSSSAGG SGRESSASLPRWSGG   PAGA SSS CSS VHRSVL+GSNAAAAPSDWVDRVRKMPTIASSPRASSPNVV RMGGNGGGNG DVRSPSPRQEDNN TSPRSMGMLHPGPMP+AAP+VGVKYMSEPRDNLALLSTVAAPGGYNNP                                       LPPPANPGL TGMSFDPNRDDGTFQFTLGPS
Sbjct:    1 MGDTPGGFGEA---GXXXXXXXXVQAGFFPKGSMGSTFMRQQDGGSEGRQHASSALGAPLPQQQQLPPRRSLPMTLDGRSKTHLKTFMRTVGSLILLPGAGAIRSAVFGDAGGGDPEQLPDAPTAADPGSAEDVGVKREGRPVAAEEDGGIVDVFAEACRAEAWAAAAVGAQFSGASEEECKDYQSRAMGALSRCLDAPLPEVASVMLLLCLFWMHSMETRKVARYFGFAQQVGLELGSLMPEELRHTIAFVACLVTMTLNLDQVGSFSLQVKDQAVWGVSLRDNSCRPGVDPFVLALTALTVACNEMLHDGAGRGGQGAIGAGGLSPRVAPSKVLTDLLTKAAKALEADARDGNRNPEHVLALLHGLRAFTHAARGEAEDAEASGRLMLAIIDRHAAVLHLPLTFTLAEASRRLLAAAAERSSRPAPEGVHVEALGAAVTKLSFARSTQAVKPGAGGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVLSEAANDNRDRSRSGSMSPPPRRSVRPLSRAAIASQSWQPTTGGAAMPIPSSSAGGASGRESSASLPRWSGGGAAPAGAPSSS-CSSGVHRSVLLGSNAAAAPSDWVDRVRKMPTIASSPRASSPNVVHRMGGNGGGNGGDVRSPSPRQEDNNCTSPRSMGMLHPGPMPSAAPSVGVKYMSEPRDNLALLSTVAAPGGYNNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPPANPGLATGMSFDPNRDDGTFQFTLGPS 761

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BLAST of mRNA_Ecto-sp13_S_contig1859.5820.1 vs. uniprot
Match: A0A6H5K6R5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6R5_9PHAE)

HSP 1 Score: 265 bits (676), Expect = 4.340e-79
Identity = 132/140 (94.29%), Postives = 133/140 (95.00%), Query Frame = 0

Query:  972 MGGNGGGNGDDVRSPSPRQEDNNITSPRSMGMLHPGPMPTAAPNVGVKYMSEPRDNLALLSTVAAPGGYNNPPRRASYEDRTGVERQAAVRQRIAGQPGGGGAADRDGGDDLPPPANPGLTTGMSFDPNRDDGTFQFTLG 1111
            MGGNGGGNG DVRSPSPRQE NNITSPR MGMLHPGPMPTAAPNVGVKYMSEP DNLALLSTVAAPG YNNPPRRASYEDR+GVERQAAVRQRIA QP GGGAADRDGGDDLPPPANPGLTTGMSFDPNRDDGTFQFTLG
Sbjct:    1 MGGNGGGNGGDVRSPSPRQEGNNITSPRFMGMLHPGPMPTAAPNVGVKYMSEPCDNLALLSTVAAPGAYNNPPRRASYEDRSGVERQAAVRQRIAAQPSGGGAADRDGGDDLPPPANPGLTTGMSFDPNRDDGTFQFTLG 140

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BLAST of mRNA_Ecto-sp13_S_contig1859.5820.1 vs. uniprot
Match: A0A6H5KIX7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIX7_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 7.030e-5
Identity = 23/45 (51.11%), Postives = 34/45 (75.56%), Query Frame = 0

Query:   39 GALRKSCDTCTSSKTKCQGSIPCDRCKKRRIECKFSKRRRCGPKA 83
            G LRKSCD+C SSK +C G  PC RC +R+  C +++R++CGP++
Sbjct:   46 GFLRKSCDSCVSSKRRCDGQDPCTRCLRRKKPCHYTERKKCGPRS 90

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1859.5820.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1859.5820.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A6H5K1B7_9PHAE	0.000e+0	86.75	Zn(2)-C6 fungal-type domain-containing protein (Fr...	[more]
D8LQH3_ECTSI	0.000e+0	85.75	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K6R5_9PHAE	4.340e-79	94.29	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KIX7_9PHAE	7.030e-5	51.11	Zn(2)-C6 fungal-type domain-containing protein n=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036864	Zn(2)-C6 fungal-type DNA-binding domain superfamily	GENE3D	4.10.240.10		coord: 42..120 e-value: 3.8E-5 score: 26.0
IPR036864	Zn(2)-C6 fungal-type DNA-binding domain superfamily	SUPERFAMILY	57701	Zn2/Cys6 DNA-binding domain	coord: 37..78
None	No IPR available	PANTHER	PTHR47663	FAMILY NOT NAMED	coord: 22..124
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 564..1113
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 546..563
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..545
IPR001138	Zn(2)-C6 fungal-type DNA-binding domain	PROSITE	PS00463	ZN2_CY6_FUNGAL_1	coord: 44..71
IPR001138	Zn(2)-C6 fungal-type DNA-binding domain	PROSITE	PS50048	ZN2_CY6_FUNGAL_2	coord: 44..73 score: 9.424

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1859	contig	Ecto-sp13_S_contig1859:2769..10614 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1859.5820.1	mRNA_Ecto-sp13_S_contig1859.5820.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1859 2769..10630 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1859.5820.1 ID=prot_Ecto-sp13_S_contig1859.5820.1|Name=mRNA_Ecto-sp13_S_contig1859.5820.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1114bp
MTEDSNNSDSSTATKTAAMIHPDRVAPDPTEGWRRGSRGALRKSCDTCTS
SKTKCQGSIPCDRCKKRRIECKFSKRRRCGPKARAEDEKRPRTGIEAQQE
AGLAIKDSPEHKAAMHQQHAGVPHSPSPPLPPIGTIAGLDSSSNNVTGGG
GGGGGGGLPVSSPKFGGPITSDSLSGLVELIAPTLSDTGGSGSSASISAS
INASISSSCHGGGEAAYSHHAAAASGNNRYAAIPGLNAEGVSPFLGGGGT
SPRHHNQHGASRGGASNRPAFPPSSSVAAVATLSSLSAAMNHTSRQQPGG
GGGGGGGARDSLVGARSAPPSGAAAAGGGAPSSTPPSCPVRDLPARAKSM
GDTPGGFGQAEGGGGGGRGGRGVQAGFPEGSMGNTFMRQQDGGSELRQNA
SSASGAPLSPQQPLPRRGSLPMTLNGRSKTHLKTFMRTVGSLILLPGADA
IRSAVFGDAGGGDPEQLPDAPTAADPGSAEDVGVKREGRPMAAEEDSGIV
DVFAEACRAEAWAAAAVGAQFSGASEEECKDYQSRAMRALSRCLDAPLPE
VASVMLLFCLFWMHSMETRKVSRYFGFAQQVGLELGSLMPEELRHTIAFV
ACLVTMTLNLDQVGSFSLQVKEQAVWGVSLRDNSCRPGVDPFVLALTALT
VACNEMLHDGAGRGGQGAIGTGGLSPRVAPSKVLTDLLTKAAKALEADAR
DGDRNPEHVLALLHGLRAYTHAARGEAEDAEASGRLMLAIIDRHAAVLHL
PLTFTLAEASRRLLAAAAERSSRRAPEGVHVEALGAAVTKLSFARPTQGV
KPGAGGVAAAAGGGGGGWCSFGDDILAAFAAAGGRDIGGDVLSEAANDNR
DRPRSGSMSPPARRSVRPLSRAVIASQSWQPTTGGAAMPIPSSSAGGTSG
RESSASLPRWSGGGAAPAGALSSSSCSSAVHRSVLMGSNAAAAPSDWVDR
VRKMPTIASSPRASSPNVVQRMGGNGGGNGDDVRSPSPRQEDNNITSPRS
MGMLHPGPMPTAAPNVGVKYMSEPRDNLALLSTVAAPGGYNNPPRRASYE
DRTGVERQAAVRQRIAGQPGGGGAADRDGGDDLPPPANPGLTTGMSFDPN
RDDGTFQFTLGPS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036864	Zn2-C6_fun-type_DNA-bd_sf
IPR001138	Zn2-C6_fun-type_DNA-bd