mRNA_Ecto-sp13_S_contig18587.5819.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18587.5819.1 vs. uniprot
Match: A0A6H5KKF3_9PHAE (Fe2OG dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKF3_9PHAE) HSP 1 Score: 428 bits (1100), Expect = 6.690e-148 Identity = 206/215 (95.81%), Postives = 209/215 (97.21%), Query Frame = 1
Query: 1 AKPPLSRSLHAVDVSGPGCGAHRYLSPTHAVPGFHLACIEEEAGTSGGGGGAVSVTLFRDGRGEGNQTLALQTPPDSGSATSVLHAELTETLRLDDVGPNPPNKFPWAMYTPDGQRRISSLEDAIASRLVFIFKGGNFIWPGVEVGHVQTVHGLETLGSIDMKTLSMEPLVFEARNFLLDEECKHIREKADPHMKPSPVSLMDHDKGKPDTNWRT 645
AKPP+SRSLHAVDVSGPGCGAHRYLSPTH V GFHLACIEEEAG+SGG GG VSVTLFRDGRGEGNQTLALQTPPDS SATSVLHAELTE LRLDDVGP+PPNKFPWAMYTPDGQRRISSLEDAIASRLVFIFKGGNFIWPGVEVGHVQTVHGLETLGSIDMKTLSMEPLVFEARNFLLDEECKHIREKADPHMKPSPVSLMDHDKGKPDTNWRT
Sbjct: 75 AKPPISRSLHAVDVSGPGCGAHRYLSPTHGVSGFHLACIEEEAGSSGGRGGVVSVTLFRDGRGEGNQTLALQTPPDSSSATSVLHAELTERLRLDDVGPDPPNKFPWAMYTPDGQRRISSLEDAIASRLVFIFKGGNFIWPGVEVGHVQTVHGLETLGSIDMKTLSMEPLVFEARNFLLDEECKHIREKADPHMKPSPVSLMDHDKGKPDTNWRT 289
BLAST of mRNA_Ecto-sp13_S_contig18587.5819.1 vs. uniprot
Match: A0A4D9CPD2_9STRA (Fe2OG dioxygenase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CPD2_9STRA) HSP 1 Score: 134 bits (336), Expect = 2.010e-33 Identity = 85/210 (40.48%), Postives = 111/210 (52.86%), Query Frame = 1
Query: 40 VSGP---GCGAHRYLSPTHAVPGFHLACIEEEAGTSGGGGGAVSVTLFRDGRGEGNQTLALQTPPDSGSATSVL-HAELTETLRLDDVGPN----PPNKFPWAMYTPDGQRRISSLEDAIASRLVFIFKGGNFIWPGVEVGHVQTVHGLETLGSIDMKTLSMEPLVFEARNFLLDEECKHIREKADPHMKPSPVSLMDHDKGKPDTNWRT 645
VSGP GC L V G HL CI+ T G + T+F DG+ + + G T + L R + GP P + PW+M++P G S L+ + V +++GG FIWPGV G+V V L+ LGS+ M+TLSM PLVF NFLL EEC +IR+ A+PHM+ S V LMDHDKGK T+WRT
Sbjct: 75 VSGPSLAGCSIST-LFADEPVHGMHLGCIQH---TPTG----LYATMFMDGQNHTRREVIASMNDFQGLRTLLGDRLGLAPVGRRNGEGPRDKETPNTQKPWSMFSPQGIAIDSLLDLQEGANDVLLYEGGKFIWPGVREGYVTQVTALDRLGSVKMQTLSMSPLVFSVENFLLPEECTYIRDVAEPHMRQSGVKLMDHDKGKAATDWRT 276
BLAST of mRNA_Ecto-sp13_S_contig18587.5819.1 vs. uniprot
Match: A0A1V9ZLT6_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZLT6_9STRA) HSP 1 Score: 123 bits (308), Expect = 1.140e-29 Identity = 72/203 (35.47%), Postives = 106/203 (52.22%), Query Frame = 1
Query: 37 DVSGPGCGAHRYLSPTHAVPGFHLACIEEEAGTSGGGGGAVSVTLFRDGRGEGNQTLALQTPPDSGSATSVLHAELTETLRLDDVGPNPPNKFPWAMYTPDGQRRISSLEDAIASRLVFIFKGGNFIWPGVEVGHVQTVHGLETLGSIDMKTLSMEPLVFEARNFLLDEECKHIREKADPHMKPSPVSLMDHDKGKPDTNWRT 645
DV+G A +L+ H V GFH+ CI + + + +F+DG GNQ + +T D GS L +L L + K WA +T G++ + L +++++ +GG FIWPG+ +GH +T+ L LG I M+TL+M PLVF FL D+E I + + H+ PS VS D D+GKP T WRT
Sbjct: 49 DVAGCAASAAEHLTDVHPVIGFHVLCITKTQHDT------LQGMVFKDGF-SGNQPVGFETALDMGSLRVALEEKLDIPLPKTQLERQ--FKQLWAFFTTHGEK-LDGLSKLYQDKVIYMMEGGQFIWPGIRIGHKRTIKNLHGLGDIVMETLAMVPLVFSVEEFLRDDEIDVILDLSMEHLAPSGVSHHDGDEGKPATEWRT 241
BLAST of mRNA_Ecto-sp13_S_contig18587.5819.1 vs. uniprot
Match: A0A662X8W0_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X8W0_9STRA) HSP 1 Score: 123 bits (308), Expect = 2.750e-29 Identity = 80/221 (36.20%), Postives = 112/221 (50.68%), Query Frame = 1
Query: 16 SRSLHAVDVSGPGCGAHRYLSPTHAVPGFHLACIEEEA--------GTSGGGGGAVSVTLFRDGRGEGNQTLALQTPPDSGSATSVLHAELTETLRLDDVGPNPPNKFPWAMYTPDGQR---RISSLEDAIASRLVFIFKGGNFIWPGVEVGHVQTVHGLETLGSIDMKTLSMEPLVFEARNFLLDEECKHIREKADPHMKPSPVSLMDHDKGKPDTNWRT 645
S++L A DV AH++L+ V GFH+ CIE G +GG GG + + ++T D S T + EL + D K A +TPDGQR ++S L D R+VF+F+GG FIWPGV +GH V G ++++T+SM PLVF FL D+E I E + PH+KPS V+L D + +P T+WRT
Sbjct: 106 SQALDAADVDC--ASAHQFLTDVMPVKGFHVLCIETTPSNTCVALPGVAGGSGGPLRTS-----------NDCVETAVDLVSFTQAVEVELLQIPPPQDEYARQ-FKQSTAYFTPDGQRLDKKLSQLRD----RIVFLFEGGQFIWPGVRIGHKTLVKDTYGRGDLELETISMTPLVFSVEEFLRDDEIDVILELSTPHLKPSGVTLQDGHENRPATDWRT 308
BLAST of mRNA_Ecto-sp13_S_contig18587.5819.1 vs. uniprot
Match: A0A2D4BQL2_PYTIN (Fe2OG dioxygenase domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQL2_PYTIN) HSP 1 Score: 122 bits (306), Expect = 3.290e-29 Identity = 75/200 (37.50%), Postives = 107/200 (53.50%), Query Frame = 1
Query: 61 AHRYLSPTHAVPGFHLACIEEEAGTSGGGGGAVSVTLFRDGRGEGNQTLALQTPPDSGSATSVLHAELTETLRLDDVGPNPPN-----KFPWAMYTPDGQRRISSLEDAIASRLVFIFKGGNFIWPGVEVGHVQTVHGLETLGSIDMKTLSMEPLVFEARNFLLDEECKHIREKADPHMKPSPVSLMDHDKGKPDTNWRT 645
A +YL+ V GFH+ C ++ A +S+T ++DG P S + + A TE RL + P K P+A +TP+G +R+ L D IA+R+VF+F+GG FIWPG++VGH V + G + ++TLSM PLVF FL DEE I E + H+KPS V+ MD + +P T WRT
Sbjct: 88 ATQYLTEVGPVKGFHVLCTKKSADN------VLSITAYKDG----------MAPAVSAESPAEFAAFKTELERLFAIAPPADELAIKYKQPYAFFTPEG-KRLERLSD-IANRVVFLFEGGQFIWPGIKVGHKTVVRNVTGKGDLVLETLSMVPLVFSVEEFLKDEEXXVILELSLEHLKPSGVTHMDGHEDRPATEWRT 269
BLAST of mRNA_Ecto-sp13_S_contig18587.5819.1 vs. uniprot
Match: H3GDE0_PHYRM (Fe2OG dioxygenase domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GDE0_PHYRM) HSP 1 Score: 122 bits (305), Expect = 4.230e-29 Identity = 74/198 (37.37%), Postives = 109/198 (55.05%), Query Frame = 1
Query: 61 AHRYLSPTHAVPGFHLACIEEEAGTSGGGGGAVSVTLFRDGRGEGNQTLALQTPPDSGSATSVLHAELTETLRLDDVGPNPPNKFPWAMYTPDGQRRISSLEDAIA---SRLVFIFKGGNFIWPGVEVGHVQTVHGLETLGSIDMKTLSMEPLVFEARNFLLDEECKHIREKADPHMKPSPVSLMDHDKGKPDTNWRT 645
AH+YL+ AV GFH+ C+E A + VT F+DG + +++T D + T + E+ + + D K P A +TPDG+R LE +IA +R++F+F+GG FIWPGV +GH V G + M+T+SM PLVF FL D+E I + + PH+ PS V+L D + +P T+WRT
Sbjct: 78 AHQYLTDIMAVKGFHVLCVETTATE------VLKVTGFKDGM---HTNSSVETTTDLEAFTHAVEDEMLQIAKPSDEHARE-FKQPPAYFTPDGER----LEKSIAVFQNRIMFLFEGGQFIWPGVRIGHKTIVKDTFGQGDLMMETISMTPLVFSVEEFLRDDEIDIILQLSMPHLAPSGVTLQDGHEDRPATDWRT 261
BLAST of mRNA_Ecto-sp13_S_contig18587.5819.1 vs. uniprot
Match: A0A329S425_9STRA (Fe2OG dioxygenase domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=A0A329S425_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.800e-28 Identity = 72/199 (36.18%), Postives = 109/199 (54.77%), Query Frame = 1
Query: 52 GCG-AHRYLSPTHAVPGFHLACIEEEAGTSGGGGGAVSVTLFRDGRGEGNQTLALQTPPDSGSATSVLHAELTETLRLDDVGPNPPNKFPWAMYTPDGQRRISSLEDAIASRLVFIFKGGNFIWPGVEVGHVQTVHGLETLGSIDMKTLSMEPLVFEARNFLLDEECKHIREKADPHMKPSPVSLMDHDKGKPDTNWRT 645
GC AH++L+ V GFH+ CIE A + + V F+DG N T+ +T D + T + E+ + L D K P A +TPDG+R ++ + +R+VF+F+GG FIWPG+ +GH V G + ++T+SM PLVF +FL ++E I E + PH+ PS V+L D + +P T+WRT
Sbjct: 59 GCNDAHQFLTDVMPVKGFHVLCIEMTASDT------LKVAGFKDGM-HANSTV--ETTKDLETFTRAVEDEILQIPELSDEYARQ-YKQPPAYFTPDGERLDRNIS-VLQNRIVFLFEGGQFIWPGIRIGHKTLVKNTFGRGDLVLETISMTPLVFSVEDFLRNDEIDVILELSMPHLAPSGVTLQDGHENRPATDWRT 246
BLAST of mRNA_Ecto-sp13_S_contig18587.5819.1 vs. uniprot
Match: A0A6A3EI81_9STRA (Fe2OG dioxygenase domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3EI81_9STRA) HSP 1 Score: 119 bits (299), Expect = 2.750e-28 Identity = 70/195 (35.90%), Postives = 103/195 (52.82%), Query Frame = 1
Query: 61 AHRYLSPTHAVPGFHLACIEEEAGTSGGGGGAVSVTLFRDGRGEGNQTLALQTPPDSGSATSVLHAELTETLRLDDVGPNPPNKFPWAMYTPDGQRRISSLEDAIASRLVFIFKGGNFIWPGVEVGHVQTVHGLETLGSIDMKTLSMEPLVFEARNFLLDEECKHIREKADPHMKPSPVSLMDHDKGKPDTNWRT 645
AH+YL+ V GFH+ CIE + + VT F+DG N +++T D + EL + R D K P A ++PDG+R + + +R+VF+F+GG FIWPG+ +GH V G + M+T+SM PLVF FL D+E + E + PH+ PS V+L D + +P T+WRT
Sbjct: 70 AHQYLTDVMPVKGFHVLCIEAPTPDT------LKVTGFKDGMLANN---SVETTTDFDEFAQAVEDELLQFPRPSDEYAQK-YKQPAAYFSPDGER-LDKNTSVLQNRIVFLFEGGQFIWPGIRIGHKTLVKNTFGRGDLVMETISMTPLVFSVEEFLRDDEIDVVLELSMPHLAPSGVTLQDGHENRPATDWRT 253
BLAST of mRNA_Ecto-sp13_S_contig18587.5819.1 vs. uniprot
Match: A0A3M6VAP6_9STRA (P4Hc domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VAP6_9STRA) HSP 1 Score: 119 bits (298), Expect = 3.720e-28 Identity = 69/196 (35.20%), Postives = 110/196 (56.12%), Query Frame = 1
Query: 61 AHRYLSPTHAVPGFHLACIEEEAGTSGGGGGAVSVTLFRDGRGEGNQTLALQTPPDSGSATSVLHAELTETLR-LDDVGPNPPNKFPWAMYTPDGQRRISSLEDAIASRLVFIFKGGNFIWPGVEVGHVQTVHGLETLGSIDMKTLSMEPLVFEARNFLLDEECKHIREKADPHMKPSPVSLMDHDKGKPDTNWRT 645
AH++L+ + GFH+ CIE + + VT F+DG + +L+T D + + + EL + + D+ G K P A +TP+G R ++ A+ +++VF+F+GG FIWPGV +GH + V G + ++T+SM PLVF +FLLD+E I + + PH+ PS V+L D + +P T WRT
Sbjct: 68 AHQFLTDVMPIKGFHVLCIETTTTDT------LKVTSFKDGM---HANESLETTKDIETFSYAVEEELLQISKPSDEYGQK--YKQPSAYFTPEGVRLEKNVT-ALENQIVFLFEGGQFIWPGVRIGHKRIVENTFGRGDLVLETISMTPLVFCVEDFLLDDEIDIILDLSMPHLAPSDVALQDGHENRPSTEWRT 251
BLAST of mRNA_Ecto-sp13_S_contig18587.5819.1 vs. uniprot
Match: A0A7S2WGY1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WGY1_9STRA) HSP 1 Score: 120 bits (300), Expect = 4.080e-28 Identity = 65/183 (35.52%), Postives = 103/183 (56.28%), Query Frame = 1
Query: 97 GFHLACIEEEAGTSGGGGGAVSVTLFRDGRGEGNQTLALQTPPDSGSATSVLHAELTETLRLDDVGPNPPNKFPWAMYTPDGQRRISSLEDAIASRLVFIFKGGNFIWPGVEVGHVQTVHGLETLGSIDMKTLSMEPLVFEARNFLLDEECKHIREKADPHMKPSPVSLMDHDKGKPDTNWRT 645
G H C+++ GG +V L + E + + + ++++++ + L D++ PW M+T DG + + SL D ++ + +F+GGNFIWPG+ VGH ++V L+ S+ ++T+S+ PLVF R+FL EC +I+ +A PHM S VSLMD D GKP TNWRT
Sbjct: 135 GMHAVCVQDWEVMKDGGEVRFTVVLVPSAQAEPSAAITTSFAVATDASSNLIFHSFRKLLE-DELKVQNRTVNPWGMFTGDG-KPVHSLTDLLSVSHILVFEGGNFIWPGIRVGHTRSVF-LDDGVSVTLETISLRPLVFSIRDFLSTYECTYIQREASPHMAQSGVSLMDKDIGKPATNWRT 314 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18587.5819.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18587.5819.1 >prot_Ecto-sp13_S_contig18587.5819.1 ID=prot_Ecto-sp13_S_contig18587.5819.1|Name=mRNA_Ecto-sp13_S_contig18587.5819.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=217bp AKPPLSRSLHAVDVSGPGCGAHRYLSPTHAVPGFHLACIEEEAGTSGGGGback to top mRNA from alignment at Ecto-sp13_S_contig18587:33..2234- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18587.5819.1 ID=mRNA_Ecto-sp13_S_contig18587.5819.1|Name=mRNA_Ecto-sp13_S_contig18587.5819.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2202bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18587:33..2234- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18587:33..2234- >mRNA_Ecto-sp13_S_contig18587.5819.1 ID=mRNA_Ecto-sp13_S_contig18587.5819.1|Name=mRNA_Ecto-sp13_S_contig18587.5819.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=651bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18587:33..2234- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |