prot_Ecto-sp13_S_contig18568.5811.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18568.5811.1
Unique Nameprot_Ecto-sp13_S_contig18568.5811.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length241
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18568.5811.1 vs. uniprot
Match: D7FTN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTN3_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 6.130e-57
Identity = 102/137 (74.45%), Postives = 102/137 (74.45%), Query Frame = 0 
Query:  105 MSYELFENERELRRLAVLPPEDRVLAAAAAGRAWCVEELFAQGCPIEGKHGSGFTALHVAAMRNDPNTIRVLLNMKVDVNSTNMSGATPLSCAMGGAGGPDGECATLLRASGGLVRLVKDTISPGSILDVPLRRPRR 241
            MSYELFENERELRRLAVLPPEDRVLAAAAAGRAWCVEELFAQGCPIEGKH                                 MSGATPLSCAMGGAGGPDGECATLLRASGGLVRLVKDTIS GSILDV LRRPRR
Sbjct:    1 MSYELFENERELRRLAVLPPEDRVLAAAAAGRAWCVEELFAQGCPIEGKH---------------------------------MSGATPLSCAMGGAGGPDGECATLLRASGGLVRLVKDTISSGSILDVSLRRPRR 104
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18568.5811.1 vs. uniprot
Match: A0A7S2XV99_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV99_9STRA)

HSP 1 Score: 130 bits (327), Expect = 5.970e-34
Identity = 74/173 (42.77%), Postives = 104/173 (60.12%), Query Frame = 0 
Query:   70 IARDGCLSQCENDRHLV--RDPQLYLRWTPIYPHPLPMSYELFENERELRRLAVLPPEDRVLAAAAAGRAWCVEELFAQGCPIEGKHGSGFTALHVAAMRNDPNTIRVLLNMKVDVNSTNMSGATPLSCAMGGAGGPDGECATLLRASGGLVRLVK-DTISPGSILDVPLRRP 239
            IARD  +   + D  +   RD  L ++W P+  HPLP+S E F N+R +RRL  L P  R L AAA GRAWC+EE + +GCPIE  +G G+  LH+AA       +RVLLN+ VD N + M+G  PL+ A+        +CATL+R +GG+++    D +    ILDV +R+P
Sbjct:   18 IARDESIIFQKEDAEIEKNRDHMLLVKWRPLLRHPLPVSEEKFANDRLMRRLNGLHPSKRALLAAAEGRAWCIEECYIKGCPIEVTNGEGYKPLHLAASLGHVEAVRVLLNIGVDPNDSTMTGFLPLALAVAS---NHTQCATLIREAGGVMQAPDPDQVQLLRILDVDIRQP 187
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18568.5811.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTN3_ECTSI6.130e-5774.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2XV99_9STRA5.970e-3442.77Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 156..185
e-value: 1.1E-4
score: 31.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 156..188
score: 11.728
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 131..199
e-value: 2.3E-8
score: 34.5
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 131..197
score: 15.724
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 18..225
e-value: 5.1E-16
score: 60.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 130..199
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 127..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18568contigEcto-sp13_S_contig18568:423..3463 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18568.5811.1mRNA_Ecto-sp13_S_contig18568.5811.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18568 348..3463 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18568.5811.1 ID=prot_Ecto-sp13_S_contig18568.5811.1|Name=mRNA_Ecto-sp13_S_contig18568.5811.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=241bp
MPLSAGKNYTRTAIEDGLRREANQAASTEATLTPFQKALAESTRRRELTA
KREKALQLRQSSKVDVQKLIARDGCLSQCENDRHLVRDPQLYLRWTPIYP
HPLPMSYELFENERELRRLAVLPPEDRVLAAAAAGRAWCVEELFAQGCPI
EGKHGSGFTALHVAAMRNDPNTIRVLLNMKVDVNSTNMSGATPLSCAMGG
AGGPDGECATLLRASGGLVRLVKDTISPGSILDVPLRRPRR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf