prot_Ecto-sp13_S_contig18553.5801.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18553.5801.1
Unique Nameprot_Ecto-sp13_S_contig18553.5801.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length243
Homology
BLAST of mRNA_Ecto-sp13_S_contig18553.5801.1 vs. uniprot
Match: D7G8M3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8M3_ECTSI)

HSP 1 Score: 436 bits (1120), Expect = 1.200e-153
Identity = 228/243 (93.83%), Postives = 231/243 (95.06%), Query Frame = 0
Query:    1 MSRDSTGEVPAGSAVPAGSRLVSEPAFELLFSEIIAYTGAYVSHSAASHATDKLRASEACVEDEEEGEKXXXXXXXXXXAGGSLVEPNPASVGAGHQLLPSDQAQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTAGSRDLVNRLLQLPCGLVRGALANLGLVAVVRASFLDDRGGMSDLPAVSFTIKIRAGG 243
            MSRD+TGEVPAGSAV AG+RLVSEPAFELLFSEIIAYTGAYVSHSAASHATD+LRASEA VEDE EGEK  XXX      GGSLVEPNPASVGAGHQLLPSDQAQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTAGSRDLVNRLLQLPCGLVRGALANLGLVAVVRASFLDDRGGMSDLPAVSFTIKIR GG
Sbjct:    1 MSRDATGEVPAGSAVAAGNRLVSEPAFELLFSEIIAYTGAYVSHSAASHATDRLRASEAGVEDEGEGEKGGXXXDDGSDTGGSLVEPNPASVGAGHQLLPSDQAQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTAGSRDLVNRLLQLPCGLVRGALANLGLVAVVRASFLDDRGGMSDLPAVSFTIKIRVGG 243          
BLAST of mRNA_Ecto-sp13_S_contig18553.5801.1 vs. uniprot
Match: A0A7S2UTW2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTW2_9STRA)

HSP 1 Score: 159 bits (401), Expect = 5.010e-46
Identity = 78/132 (59.09%), Postives = 99/132 (75.00%), Query Frame = 0
Query:   95 GHQLLPSDQ-AQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTAGSRDLVNRLLQLPCGLVRGALANLGLVA-VVRASFLDDR 224
            G  LL S+  A+ +  R+E MG+EVGYR VER  Q+R +  + LE IKF+CKD W+++FKKQVDKLQTDH+GTFVLKD+ FRW  R+  D  A  + LV RLLQ PCG++RGALAN+GL A VVRA F+DD+
Sbjct:    1 GSGLLDSEAGAEALAHRLEGMGFEVGYRFVERVAQKRVIPSEPLEIIKFLCKDFWTEVFKKQVDKLQTDHRGTFVLKDAKFRWVLRFVADSDATGKQLVARLLQFPCGILRGALANMGLAAAVVRADFVDDQ 132          
BLAST of mRNA_Ecto-sp13_S_contig18553.5801.1 vs. uniprot
Match: A0A835ZD08_9STRA (Transport protein particle component, Bet3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD08_9STRA)

HSP 1 Score: 157 bits (397), Expect = 1.570e-44
Identity = 71/132 (53.79%), Postives = 100/132 (75.76%), Query Frame = 0
Query:  109 ARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTAGSRDLVNRLLQLPCGLVRGALANLGLVAVVRASFLDDRGGMSDLPAVSFTIKIR 240
            AR+ES+G++VG RL ER CQ + + G+ LEA+KF+CKD W+++F+KQ+DKLQTDH+GTFVL++ NF+W ++YA D +   R+L    LQ  CGLVRGA+A L   A V+A F D++   S LPAVSFTI+++
Sbjct:   66 ARLESLGWDVGCRLTERLCQTKLLSGEPLEAVKFICKDFWTEVFRKQIDKLQTDHRGTFVLRELNFKWLAKYAPDKSRTDRNLAWFTLQFACGLVRGAMATLNQPATVKADFWDEKTDRSLLPAVSFTIRLK 197          
BLAST of mRNA_Ecto-sp13_S_contig18553.5801.1 vs. uniprot
Match: F0YPS8_AURAN (Uncharacterized protein n=3 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YPS8_AURAN)

HSP 1 Score: 144 bits (363), Expect = 6.570e-40
Identity = 68/132 (51.52%), Postives = 91/132 (68.94%), Query Frame = 0
Query:  109 ARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTAGSRDLVNRLLQLPCGLVRGALANLGLVAVVRASFLDDRGGMSDLPAVSFTIKIR 240
            +R E  GYEVGYR VER  Q R +  D LE IKF+CKD+W+++F KQ+DKLQT+H+G FVLKD  FRW +R + DD    + +   +LQ PCG++RGALANLG+VA V A +         LP+ SF+I+I+
Sbjct:   28 SRPELHGYEVGYRFVERIAQARALAADHLEVIKFICKDVWNEIFGKQIDKLQTNHRGVFVLKDYTFRWLARVSSDDAEAMKRVTANILQFPCGVLRGALANLGIVATVTAEY-------GTLPSCSFSIRIQ 152          
BLAST of mRNA_Ecto-sp13_S_contig18553.5801.1 vs. uniprot
Match: A0A251TMA2_HELAN (Putative transport protein particle (TRAPP) component n=3 Tax=Asteraceae TaxID=4210 RepID=A0A251TMA2_HELAN)

HSP 1 Score: 134 bits (337), Expect = 5.780e-36
Identity = 67/135 (49.63%), Postives = 93/135 (68.89%), Query Frame = 0
Query:  110 RIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTA----GSRDLVNRLLQLPCGLVRGALANLGLVAVVRASFLDDRGGMSDLPAVSFTIKIR 240
            RIE++GY+VG++L ER    R    D LEAIKF+CKD WS+LFKKQ+D L+T+H+GTFVL+D+ FRW SR + D +A     ++D  + LL  PCG++RGAL+ LG+   V A        +S+LPA SF I+I+
Sbjct:   36 RIEAIGYQVGHQLCERYTMERPRFTDHLEAIKFLCKDFWSELFKKQIDNLKTNHRGTFVLQDNKFRWLSRVSADPSAETSSAAQDTTSMLLYFPCGIIRGALSTLGIPCAVSAD-------ISNLPACSFVIRIK 163          
BLAST of mRNA_Ecto-sp13_S_contig18553.5801.1 vs. uniprot
Match: A0A2D4BMC0_PYTIN (Transport protein particle component, Bet3 n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMC0_PYTIN)

HSP 1 Score: 134 bits (338), Expect = 6.920e-36
Identity = 65/148 (43.92%), Postives = 96/148 (64.86%), Query Frame = 0
Query:   94 AGHQLLPSDQAQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTAGSRDLVNRLLQLPCGLVRGALANLGLVAVVRASFLDDRGGMSDLPAVSFTIKIRA 241
            +G   +  ++ +++  R+E+MGY VGYR VER+ + R    + L+ IKFVCKD W  +FKKQ+DKLQT+H+G FV++D +FRW S ++      +RD+    L  PCGL+RGALANLG+ A+V A        ++ LP   F IKI++
Sbjct:   42 SGDAEVAKNRKEELTMRLEAMGYXVGYRFVERSARDRPRMTEPLDVIKFVCKDFWIMIFKKQIDKLQTNHRGVFVVQDYSFRWLSGFSSSTDQHTRDMALLFLVFPCGLIRGALANLGITAIVNAD-------LTTLPGCLFNIKIKS 182          
BLAST of mRNA_Ecto-sp13_S_contig18553.5801.1 vs. uniprot
Match: A0A485KK91_9STRA (Aste57867_8427 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KK91_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.540e-35
Identity = 72/160 (45.00%), Postives = 101/160 (63.12%), Query Frame = 0
Query:   83 SLVEPNPASVGAGHQLL--PSDQAQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTAGSRDLVNRLLQLPCGLVRGALANLGLVAVVRASFLDDRGGMSDLPAVSFTIKIR 240
            S+VE +P+S     + +  PSD    + A++E+ GY+VGYR VER  + R    + L+ IKF+CKD W  +FKKQ+DKLQT+H+G FVL+D NFRW    + +D A S+      L  PCGL+RGALANLG++A+V A        ++ +P   F IKIR
Sbjct:   25 SMVERHPSSAEKAPEDVWTPSDD---LTAKLEAFGYDVGYRFVERFSRDRPRMLEPLDVIKFLCKDFWIHIFKKQIDKLQTNHRGVFVLQDFNFRWIQALSGEDDAESKQKALVFLIFPCGLIRGALANLGILAIVNAD-------LNAVPGCVFNIKIR 174          
BLAST of mRNA_Ecto-sp13_S_contig18553.5801.1 vs. uniprot
Match: A0A8J5F1L9_ZINOF (Uncharacterized protein n=3 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5F1L9_ZINOF)

HSP 1 Score: 132 bits (333), Expect = 1.620e-35
Identity = 65/140 (46.43%), Postives = 92/140 (65.71%), Query Frame = 0
Query:  110 RIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTAGSRD--------LVNRLLQLPCGLVRGALANLGLVAVVRASFLDDRGGMSDLPAVSFTIKIRA 241
            RIE++GY+VG++L+ER    R    D LE IKF+CKD W +LFKKQ+D L+T+H+GTFVL+D+NFRW +R + D ++ + D          N LL  PCG++RGAL+NLG+   V A         S+LP  SF ++I+A
Sbjct:   20 RIEAIGYQVGHQLIERYTMERPRFNDHLEVIKFICKDFWQELFKKQIDNLKTNHKGTFVLQDNNFRWLTRISIDPSSDNNDGSQGSSSEATNLLLYFPCGIIRGALSNLGIPCAVSAD-------SSNLPFCSFMVRIKA 152          
BLAST of mRNA_Ecto-sp13_S_contig18553.5801.1 vs. uniprot
Match: K3WA95_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WA95_GLOUD)

HSP 1 Score: 133 bits (334), Expect = 3.350e-35
Identity = 65/153 (42.48%), Postives = 99/153 (64.71%), Query Frame = 0
Query:   88 NPASVGAGHQLLPSDQAQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTAGSRDLVNRLLQLPCGLVRGALANLGLVAVVRASFLDDRGGMSDLPAVSFTIKIR 240
            N A++ +G   L  ++ +++  ++E+MGY+VGYR  ER+ + R    + L+ IKFVCKD W  +FKKQ+DKLQT+H+G FV++D NFRW S ++      ++++    L  PCGL+RGALANLG+ A+V A        ++ LP   F IKI+
Sbjct:   43 NNANLESGAIELAKNKKEELTIKLEAMGYDVGYRFAERSAKDRPRMLEPLDVIKFVCKDFWILIFKKQIDKLQTNHRGVFVVQDFNFRWLSSFSSASDQHTKEMALLFLVFPCGLIRGALANLGITAIVNAD-------LTTLPGCLFNIKIK 188          
BLAST of mRNA_Ecto-sp13_S_contig18553.5801.1 vs. uniprot
Match: A0A024ULA6_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024ULA6_9STRA)

HSP 1 Score: 130 bits (327), Expect = 2.510e-34
Identity = 70/160 (43.75%), Postives = 101/160 (63.12%), Query Frame = 0
Query:   83 SLVEPNPASVGAGHQLL--PSDQAQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTAGSRDLVNRLLQLPCGLVRGALANLGLVAVVRASFLDDRGGMSDLPAVSFTIKIR 240
            S+VE +P S     + +  PSD+   + A++E+ GY+VGYR VER  + R    + L+ IKF+CKD W  +FKKQ+DKLQT+H+G FVL+D NFRW    + ++ A S+      L  PCGL+RGALANLG++A+V A        ++ +P   F IK+R
Sbjct:   26 SMVERHPTSAEKSPEDVWTPSDE---LTAKLEAFGYDVGYRFVERFSRDRPRMLEPLDVIKFLCKDFWIHIFKKQIDKLQTNHRGVFVLQDFNFRWIQALSGENDAESKQKALVFLIFPCGLLRGALANLGILAIVNAD-------LNAVPGCVFNIKLR 175          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18553.5801.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8M3_ECTSI1.200e-15393.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2UTW2_9STRA5.010e-4659.09Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A835ZD08_9STRA1.570e-4453.79Transport protein particle component, Bet3 n=1 Tax... [more]
F0YPS8_AURAN6.570e-4051.52Uncharacterized protein n=3 Tax=Aureococcus anopha... [more]
A0A251TMA2_HELAN5.780e-3649.63Putative transport protein particle (TRAPP) compon... [more]
A0A2D4BMC0_PYTIN6.920e-3643.92Transport protein particle component, Bet3 n=2 Tax... [more]
A0A485KK91_9STRA1.540e-3545.00Aste57867_8427 protein n=1 Tax=Aphanomyces stellat... [more]
A0A8J5F1L9_ZINOF1.620e-3546.43Uncharacterized protein n=3 Tax=Zingiber officinal... [more]
K3WA95_GLOUD3.350e-3542.48Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A024ULA6_9STRA2.510e-3443.75Uncharacterized protein n=3 Tax=Aphanomyces TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007194Transport protein particle (TRAPP) componentPFAMPF04051TRAPPcoord: 27..238
e-value: 2.6E-33
score: 114.8
NoneNo IPR availablePANTHERPTHR12817:SF0TRAFFICKING PROTEIN PARTICLE COMPLEX 6Bcoord: 21..240
IPR037992TRAPP complex, Trs33 subunitPANTHERPTHR12817TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 6Bcoord: 21..240
IPR024096NO signalling/Golgi transport ligand-binding domain superfamilySUPERFAMILY111126Ligand-binding domain in the NO signalling and Golgi transportcoord: 22..240

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18553contigEcto-sp13_S_contig18553:2..2951 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18553.5801.1mRNA_Ecto-sp13_S_contig18553.5801.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18553 2..2951 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18553.5801.1 ID=prot_Ecto-sp13_S_contig18553.5801.1|Name=mRNA_Ecto-sp13_S_contig18553.5801.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=243bp
MSRDSTGEVPAGSAVPAGSRLVSEPAFELLFSEIIAYTGAYVSHSAASHA
TDKLRASEACVEDEEEGEKDGDDGDDGSDAGGSLVEPNPASVGAGHQLLP
SDQAQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSD
LFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTAGSRDLVNRLLQLPC
GLVRGALANLGLVAVVRASFLDDRGGMSDLPAVSFTIKIRAGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007194TRAPP_component
IPR037992TRAPPC6/Trs33
IPR024096NO_sig/Golgi_transp_ligand-bd