mRNA_Ecto-sp13_S_contig18553.5801.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18553.5801.1 vs. uniprot
Match: D7G8M3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8M3_ECTSI) HSP 1 Score: 436 bits (1120), Expect = 1.200e-153 Identity = 228/243 (93.83%), Postives = 231/243 (95.06%), Query Frame = 1
Query: 1 MSRDSTGEVPAGSAVPAGSRLVSEPAFELLFSEIIAYTGAYVSHSAASHATDKLRASEACVEDEEEGEKXXXXXXXXXXAGGSLVEPNPASVGAGHQLLPSDQAQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTAGSRDLVNRLLQLPCGLVRGALANLGLVAVVRASFLDDRGGMSDLPAVSFTIKIRAGG 729
MSRD+TGEVPAGSAV AG+RLVSEPAFELLFSEIIAYTGAYVSHSAASHATD+LRASEA VEDE EGEK XXX GGSLVEPNPASVGAGHQLLPSDQAQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTAGSRDLVNRLLQLPCGLVRGALANLGLVAVVRASFLDDRGGMSDLPAVSFTIKIR GG
Sbjct: 1 MSRDATGEVPAGSAVAAGNRLVSEPAFELLFSEIIAYTGAYVSHSAASHATDRLRASEAGVEDEGEGEKGGXXXDDGSDTGGSLVEPNPASVGAGHQLLPSDQAQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTAGSRDLVNRLLQLPCGLVRGALANLGLVAVVRASFLDDRGGMSDLPAVSFTIKIRVGG 243
BLAST of mRNA_Ecto-sp13_S_contig18553.5801.1 vs. uniprot
Match: A0A7S2UTW2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTW2_9STRA) HSP 1 Score: 159 bits (401), Expect = 5.010e-46 Identity = 78/132 (59.09%), Postives = 99/132 (75.00%), Query Frame = 1
Query: 283 GHQLLPSDQ-AQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTAGSRDLVNRLLQLPCGLVRGALANLGLVA-VVRASFLDDR 672
G LL S+ A+ + R+E MG+EVGYR VER Q+R + + LE IKF+CKD W+++FKKQVDKLQTDH+GTFVLKD+ FRW R+ D A + LV RLLQ PCG++RGALAN+GL A VVRA F+DD+
Sbjct: 1 GSGLLDSEAGAEALAHRLEGMGFEVGYRFVERVAQKRVIPSEPLEIIKFLCKDFWTEVFKKQVDKLQTDHRGTFVLKDAKFRWVLRFVADSDATGKQLVARLLQFPCGILRGALANMGLAAAVVRADFVDDQ 132
BLAST of mRNA_Ecto-sp13_S_contig18553.5801.1 vs. uniprot
Match: A0A835ZD08_9STRA (Transport protein particle component, Bet3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD08_9STRA) HSP 1 Score: 157 bits (397), Expect = 1.570e-44 Identity = 71/132 (53.79%), Postives = 100/132 (75.76%), Query Frame = 1
Query: 325 ARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTAGSRDLVNRLLQLPCGLVRGALANLGLVAVVRASFLDDRGGMSDLPAVSFTIKIR 720
AR+ES+G++VG RL ER CQ + + G+ LEA+KF+CKD W+++F+KQ+DKLQTDH+GTFVL++ NF+W ++YA D + R+L LQ CGLVRGA+A L A V+A F D++ S LPAVSFTI+++
Sbjct: 66 ARLESLGWDVGCRLTERLCQTKLLSGEPLEAVKFICKDFWTEVFRKQIDKLQTDHRGTFVLRELNFKWLAKYAPDKSRTDRNLAWFTLQFACGLVRGAMATLNQPATVKADFWDEKTDRSLLPAVSFTIRLK 197
BLAST of mRNA_Ecto-sp13_S_contig18553.5801.1 vs. uniprot
Match: F0YPS8_AURAN (Uncharacterized protein n=3 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YPS8_AURAN) HSP 1 Score: 144 bits (363), Expect = 6.570e-40 Identity = 68/132 (51.52%), Postives = 91/132 (68.94%), Query Frame = 1
Query: 325 ARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTAGSRDLVNRLLQLPCGLVRGALANLGLVAVVRASFLDDRGGMSDLPAVSFTIKIR 720
+R E GYEVGYR VER Q R + D LE IKF+CKD+W+++F KQ+DKLQT+H+G FVLKD FRW +R + DD + + +LQ PCG++RGALANLG+VA V A + LP+ SF+I+I+
Sbjct: 28 SRPELHGYEVGYRFVERIAQARALAADHLEVIKFICKDVWNEIFGKQIDKLQTNHRGVFVLKDYTFRWLARVSSDDAEAMKRVTANILQFPCGVLRGALANLGIVATVTAEY-------GTLPSCSFSIRIQ 152
BLAST of mRNA_Ecto-sp13_S_contig18553.5801.1 vs. uniprot
Match: A0A251TMA2_HELAN (Putative transport protein particle (TRAPP) component n=3 Tax=Asteraceae TaxID=4210 RepID=A0A251TMA2_HELAN) HSP 1 Score: 134 bits (337), Expect = 5.780e-36 Identity = 67/135 (49.63%), Postives = 93/135 (68.89%), Query Frame = 1
Query: 328 RIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTA----GSRDLVNRLLQLPCGLVRGALANLGLVAVVRASFLDDRGGMSDLPAVSFTIKIR 720
RIE++GY+VG++L ER R D LEAIKF+CKD WS+LFKKQ+D L+T+H+GTFVL+D+ FRW SR + D +A ++D + LL PCG++RGAL+ LG+ V A +S+LPA SF I+I+
Sbjct: 36 RIEAIGYQVGHQLCERYTMERPRFTDHLEAIKFLCKDFWSELFKKQIDNLKTNHRGTFVLQDNKFRWLSRVSADPSAETSSAAQDTTSMLLYFPCGIIRGALSTLGIPCAVSAD-------ISNLPACSFVIRIK 163
BLAST of mRNA_Ecto-sp13_S_contig18553.5801.1 vs. uniprot
Match: A0A2D4BMC0_PYTIN (Transport protein particle component, Bet3 n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMC0_PYTIN) HSP 1 Score: 134 bits (338), Expect = 6.920e-36 Identity = 65/148 (43.92%), Postives = 96/148 (64.86%), Query Frame = 1
Query: 280 AGHQLLPSDQAQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTAGSRDLVNRLLQLPCGLVRGALANLGLVAVVRASFLDDRGGMSDLPAVSFTIKIRA 723
+G + ++ +++ R+E+MGY VGYR VER+ + R + L+ IKFVCKD W +FKKQ+DKLQT+H+G FV++D +FRW S ++ +RD+ L PCGL+RGALANLG+ A+V A ++ LP F IKI++
Sbjct: 42 SGDAEVAKNRKEELTMRLEAMGYXVGYRFVERSARDRPRMTEPLDVIKFVCKDFWIMIFKKQIDKLQTNHRGVFVVQDYSFRWLSGFSSSTDQHTRDMALLFLVFPCGLIRGALANLGITAIVNAD-------LTTLPGCLFNIKIKS 182
BLAST of mRNA_Ecto-sp13_S_contig18553.5801.1 vs. uniprot
Match: A0A485KK91_9STRA (Aste57867_8427 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KK91_9STRA) HSP 1 Score: 133 bits (335), Expect = 1.540e-35 Identity = 72/160 (45.00%), Postives = 101/160 (63.12%), Query Frame = 1
Query: 247 SLVEPNPASVGAGHQLL--PSDQAQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTAGSRDLVNRLLQLPCGLVRGALANLGLVAVVRASFLDDRGGMSDLPAVSFTIKIR 720
S+VE +P+S + + PSD + A++E+ GY+VGYR VER + R + L+ IKF+CKD W +FKKQ+DKLQT+H+G FVL+D NFRW + +D A S+ L PCGL+RGALANLG++A+V A ++ +P F IKIR
Sbjct: 25 SMVERHPSSAEKAPEDVWTPSDD---LTAKLEAFGYDVGYRFVERFSRDRPRMLEPLDVIKFLCKDFWIHIFKKQIDKLQTNHRGVFVLQDFNFRWIQALSGEDDAESKQKALVFLIFPCGLIRGALANLGILAIVNAD-------LNAVPGCVFNIKIR 174
BLAST of mRNA_Ecto-sp13_S_contig18553.5801.1 vs. uniprot
Match: A0A8J5F1L9_ZINOF (Uncharacterized protein n=3 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5F1L9_ZINOF) HSP 1 Score: 132 bits (333), Expect = 1.620e-35 Identity = 65/140 (46.43%), Postives = 92/140 (65.71%), Query Frame = 1
Query: 328 RIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTAGSRD--------LVNRLLQLPCGLVRGALANLGLVAVVRASFLDDRGGMSDLPAVSFTIKIRA 723
RIE++GY+VG++L+ER R D LE IKF+CKD W +LFKKQ+D L+T+H+GTFVL+D+NFRW +R + D ++ + D N LL PCG++RGAL+NLG+ V A S+LP SF ++I+A
Sbjct: 20 RIEAIGYQVGHQLIERYTMERPRFNDHLEVIKFICKDFWQELFKKQIDNLKTNHKGTFVLQDNNFRWLTRISIDPSSDNNDGSQGSSSEATNLLLYFPCGIIRGALSNLGIPCAVSAD-------SSNLPFCSFMVRIKA 152
BLAST of mRNA_Ecto-sp13_S_contig18553.5801.1 vs. uniprot
Match: K3WA95_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WA95_GLOUD) HSP 1 Score: 133 bits (334), Expect = 3.350e-35 Identity = 65/153 (42.48%), Postives = 99/153 (64.71%), Query Frame = 1
Query: 262 NPASVGAGHQLLPSDQAQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTAGSRDLVNRLLQLPCGLVRGALANLGLVAVVRASFLDDRGGMSDLPAVSFTIKIR 720
N A++ +G L ++ +++ ++E+MGY+VGYR ER+ + R + L+ IKFVCKD W +FKKQ+DKLQT+H+G FV++D NFRW S ++ ++++ L PCGL+RGALANLG+ A+V A ++ LP F IKI+
Sbjct: 43 NNANLESGAIELAKNKKEELTIKLEAMGYDVGYRFAERSAKDRPRMLEPLDVIKFVCKDFWILIFKKQIDKLQTNHRGVFVVQDFNFRWLSSFSSASDQHTKEMALLFLVFPCGLIRGALANLGITAIVNAD-------LTTLPGCLFNIKIK 188
BLAST of mRNA_Ecto-sp13_S_contig18553.5801.1 vs. uniprot
Match: A0A024ULA6_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024ULA6_9STRA) HSP 1 Score: 130 bits (327), Expect = 2.510e-34 Identity = 70/160 (43.75%), Postives = 101/160 (63.12%), Query Frame = 1
Query: 247 SLVEPNPASVGAGHQLL--PSDQAQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTAGSRDLVNRLLQLPCGLVRGALANLGLVAVVRASFLDDRGGMSDLPAVSFTIKIR 720
S+VE +P S + + PSD+ + A++E+ GY+VGYR VER + R + L+ IKF+CKD W +FKKQ+DKLQT+H+G FVL+D NFRW + ++ A S+ L PCGL+RGALANLG++A+V A ++ +P F IK+R
Sbjct: 26 SMVERHPTSAEKSPEDVWTPSDE---LTAKLEAFGYDVGYRFVERFSRDRPRMLEPLDVIKFLCKDFWIHIFKKQIDKLQTNHRGVFVLQDFNFRWIQALSGENDAESKQKALVFLIFPCGLLRGALANLGILAIVNAD-------LNAVPGCVFNIKLR 175 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18553.5801.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18553.5801.1 >prot_Ecto-sp13_S_contig18553.5801.1 ID=prot_Ecto-sp13_S_contig18553.5801.1|Name=mRNA_Ecto-sp13_S_contig18553.5801.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=243bp MSRDSTGEVPAGSAVPAGSRLVSEPAFELLFSEIIAYTGAYVSHSAASHAback to top mRNA from alignment at Ecto-sp13_S_contig18553:2..2951- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18553.5801.1 ID=mRNA_Ecto-sp13_S_contig18553.5801.1|Name=mRNA_Ecto-sp13_S_contig18553.5801.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2950bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18553:2..2951- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18553:2..2951- >mRNA_Ecto-sp13_S_contig18553.5801.1 ID=mRNA_Ecto-sp13_S_contig18553.5801.1|Name=mRNA_Ecto-sp13_S_contig18553.5801.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=729bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18553:2..2951- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |