prot_Ecto-sp13_S_contig18547.5795.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18547.5795.1
Unique Nameprot_Ecto-sp13_S_contig18547.5795.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length731
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18547.5795.1 vs. uniprot
Match: A0A6H5L4C8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4C8_9PHAE)

HSP 1 Score: 887 bits (2291), Expect = 1.650e-302
Identity = 538/619 (86.91%), Postives = 548/619 (88.53%), Query Frame = 0 
Query:  123 GGRFPSSSDKGSPKKPQAPTPAVSSDGGVVAEGVQKGEAQEAAATGGXXG----------TSPSKTGLSQAQGPAPGQPARRTRADVPSGPIRSSPSNSPPLRPLSGSFGPGAGLSYSGLVPAVVPSGAVAGVAGPGGGALSGVYLGALGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSSVRFVAGVXXXXXSSSHQRGMFSMISSGTTPYGSELAYSPSPSAGDKLQEAQRQQRVRLGSRELQAASAASAGSAKSFTRHRASSNSTSDSISRPAGSGRVGVAVGSGRAARTSEGNDMSSEVGSIGGISXXXXXXXXXXXXXXEGAAAIGDGAGDGERLGDYKAGDGNDALCDDGRHMGSEDGDTDGLVGSSFLTNFGDHGAVATAAGVSIGVVGGGGAVEGWAPIRTLRAPPRSYRHNHPRIQPTHVSPRVGPSNPQQKPPPADDSGLGGVQLLSSPGGTGALDAFCSPLSEATAAAAGSEMTQAAKLKTSVRFGGVGDIRANLDRADKQQLLSRDGEGVSLLMHAAQRGETDVFRVVLDILAEKLSEQEASCVLEEFCGQDEDGQTPLLFAARSGSGAVFRQALKALNARAPPEKV 731
            GGRFPSSSDKGSPKKPQAPTPA SSDGGVVA G Q GEA  A     XX           TSPSKTGLSQAQGPAPGQ ARR+RADVPSGPIRSSPSNSPPLRPLSGSFGPGAGLSYSGLVPAV+PSGAVAGVAGPGGGALSGVYLGALGY XXXXXXXXXXXXXXXXXXXXX                        ASSSVRFVAGVXXXXX SSHQRGMFSMISSGTTP+GSELAYSPSPSAGDKLQEAQRQQRVRLGSRELQA SAASAG+AKSFTRHRASSNSTSDSISR  GSGRVGV VGSGRA RT+EGND+ SEVGSIGGIS     XXXX     EGAAAIGDGAGDGERLGDYKAGDGND L DDGRHMGSEDGDTDGLVGSSFLTNFGDHGAVATAAGVS+GVVGGGGAVEGWAP+R LRAPPRSYRHNHPRIQPTHVSPRVGPSNP QKPPPADDSGLGGVQLLSSPGGTGALDAFCSPLSEATAAAAGSEMT AAKLKTSVRFGGVGDIRANL RADKQQL+SRDGEGVSLLMHAAQRGETDVFRVVLDILAEKLSEQEASC+LEEFCGQDEDGQTPLLFAARSGSGAVFRQALKALNARAPPEKV
Sbjct:   28 GGRFPSSSDKGSPKKPQAPTPAASSDGGVVAAGAQAGEAGVAXXXXXXXXXXXXXXXXXXTSPSKTGLSQAQGPAPGQSARRSRADVPSGPIRSSPSNSPPLRPLSGSFGPGAGLSYSGLVPAVLPSGAVAGVAGPGGGALSGVYLGALGYGXXXXXXXXXXXXXXXXXXXXXISLPPVSPAS--------------ASSSVRFVAGVXXXXXXSSHQRGMFSMISSGTTPHGSELAYSPSPSAGDKLQEAQRQQRVRLGSRELQATSAASAGAAKSFTRHRASSNSTSDSISRAGGSGRVGVVVGSGRAERTAEGNDVGSEVGSIGGISEVGAGXXXXSVHSGEGAAAIGDGAGDGERLGDYKAGDGNDTLSDDGRHMGSEDGDTDGLVGSSFLTNFGDHGAVATAAGVSVGVVGGGGAVEGWAPVRALRAPPRSYRHNHPRIQPTHVSPRVGPSNPPQKPPPADDSGLGGVQLLSSPGGTGALDAFCSPLSEATAAAAGSEMTHAAKLKTSVRFGGVGDIRANLGRADKQQLVSRDGEGVSLLMHAAQRGETDVFRVVLDILAEKLSEQEASCMLEEFCGQDEDGQTPLLFAARSGSGAVFRQALKALNARAPPEKV 632
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BLAST of mRNA_Ecto-sp13_S_contig18547.5795.1 vs. uniprot
Match: D7FHF4_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHF4_ECTSI)

HSP 1 Score: 597 bits (1538), Expect = 4.580e-195
Identity = 340/363 (93.66%), Postives = 343/363 (94.49%), Query Frame = 0 
Query:  333 MFSMISSGTTPYGSELAYSPSPSAGDKLQEAQRQQRVRLGSRELQAASAASAGSAKSFTRHRASSNSTSDSISRPAGSGRVGVAVGSGRAARTSEGNDMSSEVGSIGGISXXXXXXXXXXXXXXEGAAAIGDGAGDGERLGDYKAGDGNDALCDDGRHMGSEDGDTDGLVGSSFLTNFGDHGAVATAAGVSIGVVGGGGAVEGWAPIRTLRAPPRSYRHNHPRIQPTHVSPRVGPSNPQQKPPPADDSGLGGVQLLSSPGGTGALDAFCSPLSEATAAAAGSEMTQAAKLKTSVRFGGVGDIRANLDRADKQQLLSRDGEGVSLLMHAAQRGETDVFRVVLDILAEKLSEQEASCVLEEFCGQ 695
            MFSMISSGTTPYGSELAYSPSPSAGDKLQEAQRQQRVRLGSRELQAASAASAGSAKSFTRHRASSNSTSDSISR  GSGRVGV VGSGRA RTSEGNDMSSEVGSIGGIS  XXXXXXXX    EGAAAIGDG GDGERLGDYKAGDGNDAL DDGRHMGSEDGDTDGLVGSSFLTNFGDHGAVATAAGVS+GVVGGGGAVEGWAPIR LRAPPRSYRHNHPRIQPTHVSPRVGPSNP QKPPPADDSGLG VQ+LSSPGGTGALDAFCSPLSEATAAAAGSEMTQAAKLKTSVRFGGVGDIRANL RADK QL+SRDGEGVSLLMHAAQRGETDVFRVVLDILAEKLSEQE   VLEEFCGQ
Sbjct:    1 MFSMISSGTTPYGSELAYSPSPSAGDKLQEAQRQQRVRLGSRELQAASAASAGSAKSFTRHRASSNSTSDSISR-GGSGRVGVVVGSGRAERTSEGNDMSSEVGSIGGISEVXXXXXXXXVHSGEGAAAIGDGGGDGERLGDYKAGDGNDALSDDGRHMGSEDGDTDGLVGSSFLTNFGDHGAVATAAGVSVGVVGGGGAVEGWAPIRALRAPPRSYRHNHPRIQPTHVSPRVGPSNPPQKPPPADDSGLGRVQILSSPGGTGALDAFCSPLSEATAAAAGSEMTQAAKLKTSVRFGGVGDIRANLGRADKPQLVSRDGEGVSLLMHAAQRGETDVFRVVLDILAEKLSEQE---VLEEFCGQ 359
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18547.5795.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L4C8_9PHAE1.650e-30286.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHF4_ECTSI4.580e-19593.66Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 273..293
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 186..403
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 186..403
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 627..729
e-value: 2.4E-7
score: 32.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 630..716

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18547contigEcto-sp13_S_contig18547:80..3433 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18547.5795.1mRNA_Ecto-sp13_S_contig18547.5795.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18547 80..3433 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18547.5795.1 ID=prot_Ecto-sp13_S_contig18547.5795.1|Name=mRNA_Ecto-sp13_S_contig18547.5795.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=731bp
MLDEEVAPAVAPTPSSVAAPASSAAAPHESSPAAAPASSATAAPVSSPAA
TPASSPAAAPSSSSAAAPASSEVVASAPSPAAAPLSSPEPPLSAEMAPSP
KAPSPASATAPQPPPPRSPGPGGGRFPSSSDKGSPKKPQAPTPAVSSDGG
VVAEGVQKGEAQEAAATGGGGGTSPSKTGLSQAQGPAPGQPARRTRADVP
SGPIRSSPSNSPPLRPLSGSFGPGAGLSYSGLVPAVVPSGAVAGVAGPGG
GALSGVYLGALGYGGWGGSSGSAQQHQQQQQQQQQQQQQQQRQQQPLYPI
SLPPVSPASASSSVRFVAGVSPASASSSHQRGMFSMISSGTTPYGSELAY
SPSPSAGDKLQEAQRQQRVRLGSRELQAASAASAGSAKSFTRHRASSNST
SDSISRPAGSGRVGVAVGSGRAARTSEGNDMSSEVGSIGGISEVGAGGDV
NSVHSGEGAAAIGDGAGDGERLGDYKAGDGNDALCDDGRHMGSEDGDTDG
LVGSSFLTNFGDHGAVATAAGVSIGVVGGGGAVEGWAPIRTLRAPPRSYR
HNHPRIQPTHVSPRVGPSNPQQKPPPADDSGLGGVQLLSSPGGTGALDAF
CSPLSEATAAAAGSEMTQAAKLKTSVRFGGVGDIRANLDRADKQQLLSRD
GEGVSLLMHAAQRGETDVFRVVLDILAEKLSEQEASCVLEEFCGQDEDGQ
TPLLFAARSGSGAVFRQALKALNARAPPEKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf