mRNA_Ecto-sp13_S_contig18545.5793.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18545.5793.1 vs. uniprot
Match: A0A6H5JXA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXA5_9PHAE) HSP 1 Score: 291 bits (745), Expect = 1.080e-92 Identity = 147/162 (90.74%), Postives = 151/162 (93.21%), Query Frame = 1
Query: 1 PPADAACTEETNPSSADVTLEPQFILQEHKLGVSVHSIHPLINEARAAFPVALREYRRLRQAHSSRERMPSEESTKPKEGRGGDLSDVAVAAGTLLSVTRALLLVNADHGSAWNTRKQLVVDGLSEGSSIPEEIKLLNLIFTKHAKSPNAWAHRRWCWRNNE 486
PPADAAC+EET SSADV EPQFILQEHKLGVSVHSIHPLINEAR AFPV REYRRLRQAHSSRERMPSEES KPKEGRGG LSD+AVAAGTLLSVTRALLLVNADH SAWNTRKQLVVDGL EGSSIP+E+KLLNLIFTKHAKSPNAWAHRRWCWRNNE
Sbjct: 38 PPADAACSEETTLSSADVAPEPQFILQEHKLGVSVHSIHPLINEARGAFPVTRREYRRLRQAHSSRERMPSEESAKPKEGRGGALSDLAVAAGTLLSVTRALLLVNADHASAWNTRKQLVVDGLCEGSSIPQEVKLLNLIFTKHAKSPNAWAHRRWCWRNNE 199
BLAST of mRNA_Ecto-sp13_S_contig18545.5793.1 vs. uniprot
Match: D7G9E1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E1_ECTSI) HSP 1 Score: 286 bits (732), Expect = 1.320e-90 Identity = 148/163 (90.80%), Postives = 151/163 (92.64%), Query Frame = 1
Query: 1 PPADAACTEETNPSSAD-VTLEPQFILQEHKLGVSVHSIHPLINEARAAFPVALREYRRLRQAHSSRERMPSEESTKPKEGRGGDLSDVAVAAGTLLSVTRALLLVNADHGSAWNTRKQLVVDGLSEGSSIPEEIKLLNLIFTKHAKSPNAWAHRRWCWRNNE 486
PPADAAC EET PSS D V EPQFILQEHKLGVSVHSIHPLINEARAAFPVA REYRRLR+AHSS ERMPSEES+KPKEGRGG LS VAVAA TLLSVTRALLLVNADHGSAWNTRKQLVVDGL EGSSIP+EIKLLNLIFTKHAKSPNAWAHRRWCWRNNE
Sbjct: 49 PPADAACPEETTPSSTDDVAPEPQFILQEHKLGVSVHSIHPLINEARAAFPVARREYRRLRRAHSSLERMPSEESSKPKEGRGGALSGVAVAAATLLSVTRALLLVNADHGSAWNTRKQLVVDGLCEGSSIPQEIKLLNLIFTKHAKSPNAWAHRRWCWRNNE 211
BLAST of mRNA_Ecto-sp13_S_contig18545.5793.1 vs. uniprot
Match: A0A7S4DGU3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGU3_HETAK) HSP 1 Score: 88.6 bits (218), Expect = 1.320e-17 Identity = 52/134 (38.81%), Postives = 75/134 (55.97%), Query Frame = 1
Query: 70 FILQEHKLGVSVHSIHPLINEARAAFPVALREYRRLRQAHSSRERMPSEESTKPKEGRGGDLSDVAVAAGTLLSVTRALLLVNADHGSAWNTRKQLVVDGLSEGSSIPEEIKLLNLIFTKHAKSPNAWAHRRWC 471
FIL +HKLG+S+ + PL E+R AF + R++ +P GR L A L+ +RALLL+N D +AWNTRK+L++ G + +E+K L+L+FTK AK P++WAHR WC
Sbjct: 78 FILIDHKLGISMSILQPLYRESREAFCILRRQWN----------------GGQPVGGRKTGLRRPGRMA--LVQSSRALLLLNPDQYTAWNTRKELILGGYLDAK---DELKFLDLVFTKQAKKPSSWAHRSWC 190
BLAST of mRNA_Ecto-sp13_S_contig18545.5793.1 vs. uniprot
Match: D8TDE4_SELML (Uncharacterized protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8TDE4_SELML) HSP 1 Score: 81.3 bits (199), Expect = 5.190e-15 Identity = 50/133 (37.59%), Postives = 75/133 (56.39%), Query Frame = 1
Query: 70 FILQEHKLGVSVHSIHPLINEARAAFPVALREYRRLRQAHSSRERMPSEESTKPKEGRGGDLSDVAVAAGTLLSVTRALLLVNADHGSAWNTRKQLVVDGLSEGSSIPEEIKLLNLIFTKHAKSPNAWAHRRW 468
F L++HKLG++V+++ PL EA+A F ALR +EE ++ G + +LL VTRALL+VN+D+ +AWNTRK+++ S + E++L +L+ T KS AWAHRRW
Sbjct: 78 FWLRDHKLGIAVNALRPLYTEAQAVFS-ALR----------------AEEKQCGRQENGFSKEE------SLLKVTRALLIVNSDYSTAWNTRKRVLGKSSFSQSGMISELRLSSLVLTYAPKSEEAWAHRRW 187
BLAST of mRNA_Ecto-sp13_S_contig18545.5793.1 vs. uniprot
Match: A0A2P4XM05_9STRA (Rab-protein geranylgeranyltransferase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XM05_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 2.300e-13 Identity = 52/142 (36.62%), Postives = 70/142 (49.30%), Query Frame = 1
Query: 43 SADVTLEPQFILQEHKLGVSVHSIHPLINEARAAFPVALREYRRLRQAHSSRERMPSEESTKPKEGRGGDLSDVAVAAGTLLSVTRALLLVNADHGSAWNTRKQLVVDGLSEGSSIPEEIKLLNLIFTKHAKSPNAWAHRRW 468
S+D+T E F L++HKLGV+ + PL AR F H + EE LS+ LL TRA+LL+NAD +AWNTRK V G + +E++ NL+FT H KS + WA+RRW
Sbjct: 35 SSDLTPETAFFLEDHKLGVAFAAGIPLFQAARTQF-------------HLLNALLLQEEDEIT-------LSEDNERRAQLLHCTRAILLINADFYTAWNTRKSFVTRGWLDAQ---DEVRFTNLVFTLHPKSIDTWAYRRW 153
BLAST of mRNA_Ecto-sp13_S_contig18545.5793.1 vs. uniprot
Match: A0A2J6L245_LACSA (Uncharacterized protein n=2 Tax=Lactuca TaxID=4235 RepID=A0A2J6L245_LACSA) HSP 1 Score: 75.1 bits (183), Expect = 7.920e-13 Identity = 46/138 (33.33%), Postives = 72/138 (52.17%), Query Frame = 1
Query: 55 TLEPQFILQEHKLGVSVHSIHPLINEARAAFPVALREYRRLRQAHSSRERMPSEESTKPKEGRGGDLSDVAVAAGTLLSVTRALLLVNADHGSAWNTRKQLVVDGLSEGSSIPEEIKLLNLIFTKHAKSPNAWAHRRW 468
T E F ++HK+G+S SIHPL A+ AF +L +Y+ L HS K + S + L+ +RALLL++ D G+AWN RK++V++ + +E+ L +L+ + KS W+HRRW
Sbjct: 51 TTEMSFWSKDHKVGISTESIHPLYTAAKHAFMSSLHQYKMLIPLHS-----------KKVDNISATSSPLTGLENELMKHSRALLLLSCDFGTAWNCRKEVVLNKQDIRLYL-DELSLSSLVLSCSPKSERTWSHRRW 176
BLAST of mRNA_Ecto-sp13_S_contig18545.5793.1 vs. uniprot
Match: A0A8B8DP82_CRAVI (protein prenyltransferase alpha subunit repeat-containing protein 1-like isoform X1 n=2 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8DP82_CRAVI) HSP 1 Score: 72.8 bits (177), Expect = 4.930e-12 Identity = 52/142 (36.62%), Postives = 70/142 (49.30%), Query Frame = 1
Query: 58 LEPQ-----FILQEHKLGVSVHSIHPLINEARAAFPVALREYRRLRQAHSSRERMPSEESTKPKEGRGGDLSDVAVAAGTLLSVTRALLLVNADHGSAWNTRKQLVVDGLSEGSSIPEEIKLLNLIFTKHAKSPNAWAHRRW 468
LEP+ +LQEHKLG+ S+ L A Q S R+ P + P G L S+TRA+LLVNAD +AWNTRK+LV +G S+ E++K L+ TKH KSP ++HR+W
Sbjct: 35 LEPKNNKSPLVLQEHKLGLEAWSVKVLFQYA-------------YHQLISWRKNTPPTKFLDP---------------GELCSLTRAILLVNADCATAWNTRKELVDNG---DLSVTEDLKFGALVLTKHPKSPETFSHRKW 145
BLAST of mRNA_Ecto-sp13_S_contig18545.5793.1 vs. uniprot
Match: A0A2R6WK18_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WK18_MARPO) HSP 1 Score: 72.4 bits (176), Expect = 7.840e-12 Identity = 43/135 (31.85%), Postives = 72/135 (53.33%), Query Frame = 1
Query: 70 FILQEHKLGVSVHSIHPLINEARAAFPVALREYRRLRQAHSSRERMPSEESTKPKEGR--GGDLSDVAVAAGTLLSVTRALLLVNADHGSAWNTRKQLVVDGLSEGSSIPEEIKLLNLIFTKHAKSPNAWAHRRW 468
F EHKL +S+ ++ PL A+ AF + EYR++ +A + PS T + ++ +L+S TRAL+L+N DH SAWN RK+++ + + E+++ +++ + KS WAHRRW
Sbjct: 117 FWCGEHKLAISMLALAPLYKYAKDAFTSSSAEYRKIGRAELN---SPSALGTVENQESVTATSITSKCGLEDSLMSYTRALVLINCDHASAWNMRKRILSTKTANEILLSAELRIASIVLSCAPKSEETWAHRRW 248
BLAST of mRNA_Ecto-sp13_S_contig18545.5793.1 vs. uniprot
Match: A0A6J1FGG2_CUCMO (protein prenyltransferase alpha subunit repeat-containing protein 1 isoform X2 n=1 Tax=Cucurbita moschata TaxID=3662 RepID=A0A6J1FGG2_CUCMO) HSP 1 Score: 71.2 bits (173), Expect = 1.530e-11 Identity = 47/137 (34.31%), Postives = 70/137 (51.09%), Query Frame = 1
Query: 70 FILQEHKLGVSVHSIHPLINEARAAFPVALREYRRLRQAHSSRERMPSEESTKPKEGRGGDLSDVA----VAAGTLLSVTRALLLVNADHGSAWNTRKQLVVDGLSEGSSIPEEIKLLNLIFTKHAKSPNAWAHRRW 468
F+LQ+HKLGVS +HPL AR F A R+YR ++ T G LS+++ + ++ +RALLL++ D G+AWN+RK ++ S +E+ L L+ + KS AW HRRW
Sbjct: 64 FLLQDHKLGVSTEILHPLYIAARNTFMAATRKYRSF---------CNQDDQTVA----GNHLSELSNSFNIVESEVMKHSRALLLLSCDFGTAWNSRK-FILSKKQHLSMYLDELLLSKLVLSYFPKSEQAWCHRRW 186
BLAST of mRNA_Ecto-sp13_S_contig18545.5793.1 vs. uniprot
Match: A0A3P3YKN4_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YKN4_PLABS) HSP 1 Score: 71.2 bits (173), Expect = 1.740e-11 Identity = 49/135 (36.30%), Postives = 70/135 (51.85%), Query Frame = 1
Query: 64 PQFILQEHKLGVSVHSIHPLINEARAAFPVALREYRRLRQAHSSRERMPSEESTKPKEGRGGDLSDVAVAAGTLLSVTRALLLVNADHGSAWNTRKQLVVDGLSEGSSIPEEIKLLNLIFTKHAKSPNAWAHRRW 468
P F HKLG++ ++I P+ +R RL + R R+ E V A + VTRALLLVNADH +AW R++L+ + + + +E++L+NLIF+KH KS AWAHRRW
Sbjct: 95 PPFYHNHHKLGIAFYAI-----------PILMRYVSRL--FNDMRRRLLDEPGA-------------PVDAILMHQVTRALLLVNADHYTAWAQRRRLITRSVVDEA---DELRLVNLIFSKHPKSGEAWAHRRW 200 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18545.5793.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18545.5793.1 >prot_Ecto-sp13_S_contig18545.5793.1 ID=prot_Ecto-sp13_S_contig18545.5793.1|Name=mRNA_Ecto-sp13_S_contig18545.5793.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=162bp PPADAACTEETNPSSADVTLEPQFILQEHKLGVSVHSIHPLINEARAAFPback to top mRNA from alignment at Ecto-sp13_S_contig18545:2381..3236+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18545.5793.1 ID=mRNA_Ecto-sp13_S_contig18545.5793.1|Name=mRNA_Ecto-sp13_S_contig18545.5793.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=856bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18545:2381..3236+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18545:2381..3236+ >mRNA_Ecto-sp13_S_contig18545.5793.1 ID=mRNA_Ecto-sp13_S_contig18545.5793.1|Name=mRNA_Ecto-sp13_S_contig18545.5793.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=486bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18545:2381..3236+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |