prot_Ecto-sp13_S_contig18526.5787.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18526.5787.1
Unique Nameprot_Ecto-sp13_S_contig18526.5787.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length151
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18526.5787.1 vs. uniprot
Match: A0A6H5KGM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGM3_9PHAE)

HSP 1 Score: 248 bits (632), Expect = 6.430e-82
Identity = 126/150 (84.00%), Postives = 134/150 (89.33%), Query Frame = 0 
Query:    1 MFGGKPPPIVEEQALRAKQHRGELETFQNQRVSDVHMRRLPLYSELLASLGPVAAQELTCCDAGHQPEEGAFRELWLRYHATYSQVLKSSKDSAKETSRAPGSCDDETPQGKAGKAREEIDGCVDGGGDALSLSFKREVETVERALWRRE 150
            MFGGKPPPIVEE+ALRAKQHRGE ETFQNQ +S VH+RRLPLYSELLA LGP AA+ELTCCDAGHQPE GAFRELWLRYHATYS +LKSS DS KETS A G+ DD+TPQG+AGK REEIDGC DG GDAL LSFKREVETVERALWRRE
Sbjct:    1 MFGGKPPPIVEERALRAKQHRGESETFQNQ-LSYVHIRRLPLYSELLARLGPFAARELTCCDAGHQPEGGAFRELWLRYHATYSHILKSSVDSTKETSHAGGNFDDKTPQGEAGKVREEIDGCDDGCGDALGLSFKREVETVERALWRRE 149
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18526.5787.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KGM3_9PHAE6.430e-8284.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 10..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18526contigEcto-sp13_S_contig18526:1571..2531 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18526.5787.1mRNA_Ecto-sp13_S_contig18526.5787.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18526 1571..2531 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18526.5787.1 ID=prot_Ecto-sp13_S_contig18526.5787.1|Name=mRNA_Ecto-sp13_S_contig18526.5787.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=151bp
MFGGKPPPIVEEQALRAKQHRGELETFQNQRVSDVHMRRLPLYSELLASL
GPVAAQELTCCDAGHQPEEGAFRELWLRYHATYSQVLKSSKDSAKETSRA
PGSCDDETPQGKAGKAREEIDGCVDGGGDALSLSFKREVETVERALWRRE
I
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