prot_Ecto-sp13_S_contig18524.5786.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18524.5786.1
Unique Nameprot_Ecto-sp13_S_contig18524.5786.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length206
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18524.5786.1 vs. uniprot
Match: D7FWD5_ECTSI (PX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD5_ECTSI)

HSP 1 Score: 295 bits (755), Expect = 4.860e-92
Identity = 196/206 (95.15%), Postives = 198/206 (96.12%), Query Frame = 0 
Query:    1 GRSLYFTPRETVIFGYLFDLADTDDDGLVGGNDGGHALLGRSRLPQSTLQRLWAEAGGESPDECLARPQWFVLVALVALAQAGRPCTLRDLLNTCDVVSSGSAXXXXXXXXXXXXXXXXXXXXXRLLRPIPDFXXXXXXXXXXXXXXXXXGAVPTLIAEAAAEACSAGVETTGASKHARGMSGKGGRTADVPGSRGGQRGGAGALE 206
            GRSLYFTPRETVIFGYLFDLADTDDDGLVGGNDGGHALLGRSRLPQSTLQRLWAEAGGESPDECLARPQWFVLVALVALAQAGRPCTLRDLLNTCDVVSS   XXXXXXXXXXXXXXXXXXXXXRLLRPIPDFXXXXXXXXXXXXXXXXX AVPT+IAEAAAEAC AGV TTGA+KH RGMSGKGGRTADVPGSRGGQRGGAGA E
Sbjct:    7 GRSLYFTPRETVIFGYLFDLADTDDDGLVGGNDGGHALLGRSRLPQSTLQRLWAEAGGESPDECLARPQWFVLVALVALAQAGRPCTLRDLLNTCDVVSSAXXXXXXXXXXXXXXXXXXXXXXXRLLRPIPDFXXXXXXXXXXXXXXXXXAAVPTMIAEAAAEACPAGVGTTGANKHPRGMSGKGGRTADVPGSRGGQRGGAGASE 212
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BLAST of mRNA_Ecto-sp13_S_contig18524.5786.1 vs. uniprot
Match: A0A6H5KCW0_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCW0_9PHAE)

HSP 1 Score: 280 bits (717), Expect = 5.220e-84
Identity = 184/200 (92.00%), Postives = 185/200 (92.50%), Query Frame = 0 
Query:    1 GRSLYFTPRETVIFGYLFDLADTDDDGLVGGNDGGHALLGRSRLPQSTLQRLWAEAGGESPDECLARPQWFVLVALVALAQAGRPCTLRDLLNTCDVVSSGSAXXXXXXXXXXXXXXXXXXXXX-RLLRPIPDFXXXXXXXXXXXXXXXXXGA-VPTLIAEAAAEACSAGVETTGASKHARGMSGKGGRTADVPGSRGGQ 198
            GRSLYFTPRETVIFGYLFDLADTDDDGLVGGNDGGHALLGRSRLPQSTLQRLWAEAGGESPDECLARPQWFVLVALVALAQAGRPCTLRDLLNTCDVVSS SA   XXXXXXXXXXXXXXXXX  RLLRPIPDF    XXXXXXXXXXXXX   VPT+IAEAAAEAC AGVETTGASKHARGMSGK GRTADVPGSRGGQ
Sbjct:   22 GRSLYFTPRETVIFGYLFDLADTDDDGLVGGNDGGHALLGRSRLPQSTLQRLWAEAGGESPDECLARPQWFVLVALVALAQAGRPCTLRDLLNTCDVVSSASAPLPXXXXXXXXXXXXXXXXXAGRLLRPIPDFFLDGXXXXXXXXXXXXXXXXVPTMIAEAAAEACPAGVETTGASKHARGMSGKAGRTADVPGSRGGQ 221
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18524.5786.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWD5_ECTSI4.860e-9295.15PX domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KCW0_9PHAE5.220e-8492.00PX domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 7..108
e-value: 1.8E-9
score: 39.1
NoneNo IPR availablePANTHERPTHR11216EH DOMAINcoord: 5..144
NoneNo IPR availablePANTHERPTHR11216:SF61GH06923Pcoord: 5..144
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 4..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18524contigEcto-sp13_S_contig18524:151..1950 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18524.5786.1mRNA_Ecto-sp13_S_contig18524.5786.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18524 151..1951 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18524.5786.1 ID=prot_Ecto-sp13_S_contig18524.5786.1|Name=mRNA_Ecto-sp13_S_contig18524.5786.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=206bp
GRSLYFTPRETVIFGYLFDLADTDDDGLVGGNDGGHALLGRSRLPQSTLQ
RLWAEAGGESPDECLARPQWFVLVALVALAQAGRPCTLRDLLNTCDVVSS
GSAPPPPLQAFQQQSSSSGSSNAGRLLRPIPDFFLDGGTPPPPPVAAAAA
GAVPTLIAEAAAEACSAGVETTGASKHARGMSGKGGRTADVPGSRGGQRG
GAGALE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair