prot_Ecto-sp13_S_contig18513.5780.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18513.5780.1
Unique Nameprot_Ecto-sp13_S_contig18513.5780.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length165
Homology
BLAST of mRNA_Ecto-sp13_S_contig18513.5780.1 vs. uniprot
Match: A0A6H5KSQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSQ9_9PHAE)

HSP 1 Score: 328 bits (840), Expect = 1.780e-110
Identity = 159/161 (98.76%), Postives = 161/161 (100.00%), Query Frame = 0
Query:    5 SNAMVAIAAVVASKPGSSFIYYTKPVPKWLRRNPVGNFARTIALGAEIMEVHTEDYKRIFGGADGPGASYSEVVPEEALFLPQGGADAAAEEGVSMLADEIIDYWDENGPPGKELRVILPAGTGTTALFLARHLVPEGIPVLTVPCAGDSGYLYRQMAKVE 165
            SNAMVAIAAVVASKPGSSF+YYTKPVPKWLRRNPVGNFARTIALGAEIMEVHTEDYKRIFGGADGPGASYSEVVPEEALFLPQGGADAAAEEGVSMLADEIIDYWDENGPPGKELRVILPAGTGTTALFLARHLVPEGIPVLTVPCAGDSGYLYRQMAKV+
Sbjct:  104 SNAMVAIAAVVASKPGSSFVYYTKPVPKWLRRNPVGNFARTIALGAEIMEVHTEDYKRIFGGADGPGASYSEVVPEEALFLPQGGADAAAEEGVSMLADEIIDYWDENGPPGKELRVILPAGTGTTALFLARHLVPEGIPVLTVPCAGDSGYLYRQMAKVD 264          
BLAST of mRNA_Ecto-sp13_S_contig18513.5780.1 vs. uniprot
Match: D7G221_ECTSI (Similar to 1-Aminocyclopropane-1-Carboxylate Deaminase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G221_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 5.830e-55
Identity = 91/93 (97.85%), Postives = 93/93 (100.00%), Query Frame = 0
Query:    4 QSNAMVAIAAVVASKPGSSFIYYTKPVPKWLRRNPVGNFARTIALGAEIMEVHTEDYKRIFGGADGPGASYSEVVPEEALFLPQGGADAAAEE 96
            +SNAMVAIAAVVASKPGSSFIYYTKPVPKWLRRNPVGNFARTIALGAEIMEVHTEDYKRIFGGADGPGASYS+VVPEEALFLPQGGADAAAEE
Sbjct:  237 ESNAMVAIAAVVASKPGSSFIYYTKPVPKWLRRNPVGNFARTIALGAEIMEVHTEDYKRIFGGADGPGASYSDVVPEEALFLPQGGADAAAEE 329          
BLAST of mRNA_Ecto-sp13_S_contig18513.5780.1 vs. uniprot
Match: A0A7S2SJY6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJY6_9STRA)

HSP 1 Score: 151 bits (381), Expect = 2.900e-41
Identity = 84/178 (47.19%), Postives = 112/178 (62.92%), Query Frame = 0
Query:    4 QSNAMVAIAAVVASKPGSSFIYYTKPVPKWLRRNPVGNFARTIALGAEIMEVHTEDYKRIFGGADGPGASYSEV-VPEEALFLPQGGADAAAEEGVSMLADEIIDYW-------------DENGPPGKELR--VILPAGTGTTALFLARHLVPEGIPVLTVPCAGDSGYLYRQMAKVE 165
            QSNAM+A+AAV   K G  FIY+TK +P+WLR+NP GNF R  ALG E+ ++    Y+++FGGADG      ++ +PEEAL++PQGGA   AE G ++LA EI + W             +     G++ R  V++ AGTGTTALFLAR L P  I V+ VPC G   YL RQM K++
Sbjct:   99 QSNAMLALAAVANFK-GKRFIYFTKSLPRWLRQNPSGNFLRATALGMELRQLSPTKYQQLFGGADGIAEQPQDLDLPEEALWVPQGGATIDAELGCAVLAKEIHEEWRTSDAFAQFREPLNGENADGRQQRLCVVVAAGTGTTALFLARWLTPLNISVVAVPCLGSPAYLQRQMEKLD 275          
BLAST of mRNA_Ecto-sp13_S_contig18513.5780.1 vs. uniprot
Match: A0A7S2DJY8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DJY8_9STRA)

HSP 1 Score: 151 bits (381), Expect = 3.080e-41
Identity = 82/165 (49.70%), Postives = 106/165 (64.24%), Query Frame = 0
Query:    4 QSNAMVAIAAVV-ASKPGSSFIYYTKPVPKWLRRNPVGNFARTIALGAEIMEVHTEDYKRIFGGADG-PGASYSEVVPEEALFLPQGGADAAAEEGVSMLADEIIDYWDENGP-PGKELRVILPAGTGTTALFLARHLVPEGIPVLTVPCAGDSGYLYRQMAKVE 165
            QSNAMVA+AAVV   +P S+F YYTKP+P+WLR NP GNFAR I+LG EI  +   +Y+ +FGG     GA     +P  AL++PQGGA A AE G+  LADEI    + +    G  + V++ +G+G TALFLARHL P GI V  VPC    G   RQM +++
Sbjct:  113 QSNAMVALAAVVHRHQPSSTFTYYTKPIPRWLRNNPSGNFARAISLGTEIRTLSVAEYQDLFGGLGAISGAPPGLPLPPGALWVPQGGASAEAEPGLIRLADEIYAQVEASSELAGGPVNVVVASGSGATALFLARHLHPHGIGVTAVPCVMRGGAFLRQMERLD 277          
BLAST of mRNA_Ecto-sp13_S_contig18513.5780.1 vs. uniprot
Match: R1FIR6_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FIR6_EMIHU)

HSP 1 Score: 145 bits (365), Expect = 2.550e-39
Identity = 79/172 (45.93%), Postives = 107/172 (62.21%), Query Frame = 0
Query:    3 HQSNAMVAIAAVVASKPGSSFIYYTKPVPKWLRRNPVGNFARTIALGAEIMEVHTEDYKRIFGGADG--------PGASYSEVVPEEALFLPQGGADAAAEEGVSMLADEIIDYWDENGPPGKELRVILPAGTGTTALFLARHLVP-EGIPVLTVPCAGDSGYLYRQMAKVE 165
            HQSNAM A+AAV A   G+ F+Y+TKP+P+WL   P GN  R ++LG E++E+   +Y  +FG   G        P A+   ++P EAL+LPQGGA A AE GV+ LA E+ ++W    P    L +++PAGTGTTALFLARHL     + V  VPC GD  Y+  QM  ++
Sbjct:   70 HQSNAMAALAAV-ADAHGARFLYFTKPLPRWLAAAPSGNLERALSLGMELVELADAEYASLFGAGGGVLPAVAPRPPAA---LLPPEALWLPQGGAAALAEPGVATLAREVREWWQ---PRSGRLDLVVPAGTGTTALFLARHLSQTSAVTVWAVPCVGDGDYIEAQMLALD 234          
BLAST of mRNA_Ecto-sp13_S_contig18513.5780.1 vs. uniprot
Match: R1DYP1_EMIHU (Selenoprotein O n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DYP1_EMIHU)

HSP 1 Score: 145 bits (365), Expect = 3.890e-37
Identity = 79/172 (45.93%), Postives = 107/172 (62.21%), Query Frame = 0
Query:    3 HQSNAMVAIAAVVASKPGSSFIYYTKPVPKWLRRNPVGNFARTIALGAEIMEVHTEDYKRIFGGADG--------PGASYSEVVPEEALFLPQGGADAAAEEGVSMLADEIIDYWDENGPPGKELRVILPAGTGTTALFLARHLVP-EGIPVLTVPCAGDSGYLYRQMAKVE 165
            HQSNAM A+AAV A   G+ F+Y+TKP+P+WL   P GN  R ++LG E++E+   +Y  +FG   G        P A+   ++P EAL+LPQGGA A AE GV+ LA E+ ++W    P    L +++PAGTGTTALFLARHL     + V  VPC GD  Y+  QM  ++
Sbjct:   70 HQSNAMAALAAV-ADAHGARFLYFTKPLPRWLAAAPSGNLERALSLGMELVELADAEYASLFGAGGGVLPAVAPRPPAA---LLPPEALWLPQGGAAALAEPGVATLAREVREWWQ---PRSGRLDLVVPAGTGTTALFLARHLSQTSAVTVWAVPCVGDGDYIEAQMLALD 234          
BLAST of mRNA_Ecto-sp13_S_contig18513.5780.1 vs. uniprot
Match: A0A7S4CGT2_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CGT2_9EUGL)

HSP 1 Score: 141 bits (355), Expect = 3.890e-37
Identity = 81/163 (49.69%), Postives = 107/163 (65.64%), Query Frame = 0
Query:    4 QSNAMVAIAAVVASKPGSSFIYYTKPVPKWLRRNPVGNFARTIALGAEIMEVHTEDYKRIFGGADGPGASYSEVVPEEALFLPQGGADAAAEEGVSMLADEIIDYWDENGPPGKELRVILPAGTGTTALFLARHLVPEGIP-VLTVPCAGDSGYLYRQMAKVE 165
            QSNAM+A+A V  +K G    Y+TKP+P+WLR  P GN+A  +ALGA I  V +E YK  F     P    +++VPE +L++PQGGA A AE GV  LA EI D+  +         V+LPAGTGTTALFLARHL  EG+  V+ +PC GD+ YL +QM++V+
Sbjct:  171 QSNAMLALALVAKAK-GVPLTYFTKPIPRWLRETPSGNYAEALALGANITAVSSELYKS-FEQTGCP----TQLVPEGSLWIPQGGACALAEPGVQNLASEIKDWLRDVQEFEDPFCVVLPAGTGTTALFLARHL--EGVAAVVAIPCVGDAEYLQQQMSRVD 325          
BLAST of mRNA_Ecto-sp13_S_contig18513.5780.1 vs. uniprot
Match: K0TIX7_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TIX7_THAOC)

HSP 1 Score: 136 bits (342), Expect = 1.780e-35
Identity = 75/188 (39.89%), Postives = 107/188 (56.91%), Query Frame = 0
Query:    3 HQSNAMVAIAAVVASKPGS-----------SFIYYTKPVPKWLRRNPVGNFARTIALGAEIMEVHTEDYKRIFGGADG----PGASYSEVVPEEALFLPQGGADAAAEEGVSMLADEIIDYWDENGPPGKELRVILPAGTGTTALFLARHLV----------PEGIPVLTVPCAGDSGYLYRQMAKVE 165
            HQSNAMVA+AA+V+SK  +            FIYY+KP+P++L++NP GNF R  +LG EI  +  E+Y+ +FGG  G    P A     +   +L++PQGGA   A++G  +LA EI+D+W     P   L V  P GT TTAL L+R +            + I V+ +PC G+  Y  RQMA ++
Sbjct:  140 HQSNAMVALAAIVSSKNAALGDRRTHDATKRFIYYSKPIPRYLKQNPSGNFLRATSLGMEIRTLPHEEYRSLFGGLHGGSAMPPADLDPPLAGRSLWVPQGGASGVAQDGADVLALEIVDFWASRDMP--PLAVCCPGGTCTTALLLSRSIKRILRDKRIQSADNIKVVVIPCVGNDEYAMRQMASLD 325          
BLAST of mRNA_Ecto-sp13_S_contig18513.5780.1 vs. uniprot
Match: A0A7S1TP75_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TP75_9STRA)

HSP 1 Score: 134 bits (338), Expect = 3.190e-34
Identity = 71/152 (46.71%), Postives = 91/152 (59.87%), Query Frame = 0
Query:   19 PGS-SFIYYTKPVPKWLRRNPVGNFARTIALGAEIMEVHTEDYKRIFGGADGPGASYSE----VVPEEALFLPQGGADAAAEEGVSMLADEIIDYWDENGPPGKELRVILPAGTGTTALFLARHLVPEGIPVLTVPCAGDSGYLYRQMAKVE 165
            PG  SF Y+ K +P+WLR  P GNFAR  ALG  I E+  +DYK  FGG  G      E    +VP + L++PQGGA   AE G+ +LA EI  YW E G   ++L V +PAGTGTTAL+LARHL  E I V+ + C G   Y   Q+  ++
Sbjct:  229 PGEPSFHYFMKKLPRWLRSYPSGNFARAKALGMTIHELSPQDYKWYFGGKAGSAFKIPEELEKMVPRDTLWVPQGGAMFEAEPGLKILAQEIESYWAERGAANEKLTVAVPAGTGTTALYLARHLASESIRVVALSCCGPVSYTDAQVRALD 380          
BLAST of mRNA_Ecto-sp13_S_contig18513.5780.1 vs. uniprot
Match: A0A0G4GRN7_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GRN7_VITBC)

HSP 1 Score: 129 bits (325), Expect = 5.110e-33
Identity = 69/169 (40.83%), Postives = 104/169 (61.54%), Query Frame = 0
Query:    4 QSNAMVAIAAVVAS---KPGSS-FIYYTKPVPKWLRRNPVGNFARTIALGAEIMEVHTEDYKRIFGGADGPGASYSEVVPEE--ALFLPQGGADAAAEEGVSMLADEIIDYWDENGPPGKELRVILPAGTGTTALFLARHLVP-EGIPVLTVPCAGDSGYLYRQMAKVE 165
            QSNA+ A++A+V +   + GS   +YY K +P WLR  PVG FA  +  G E   +   +Y + FGG  G  +    ++P+E   LF+PQGGA  +AEEGV++LA+E++       PP     ++LP GTG+TALFLARH+   + + V+ VP  GD  Y+ RQM++++
Sbjct:   94 QSNALRALSALVRTYNERGGSCRLLYYCKKIPSWLRERPVGTFAAALEQGVEFRPLANAEYAKHFGGDAGSPSLPQTLMPQEEDVLFIPQGGACGSAEEGVALLAEELLTQLPSLLPPAAAATIVLPGGTGSTALFLARHMQRRKDVEVVVVPVVGDWAYMARQMSRLD 262          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18513.5780.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSQ9_9PHAE1.780e-11098.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G221_ECTSI5.830e-5597.85Similar to 1-Aminocyclopropane-1-Carboxylate Deami... [more]
A0A7S2SJY6_9STRA2.900e-4147.19Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2DJY8_9STRA3.080e-4149.70Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
R1FIR6_EMIHU2.550e-3945.93Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
R1DYP1_EMIHU3.890e-3745.93Selenoprotein O n=1 Tax=Emiliania huxleyi TaxID=29... [more]
A0A7S4CGT2_9EUGL3.890e-3749.69Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
K0TIX7_THAOC1.780e-3539.89Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S1TP75_9STRA3.190e-3446.71Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A0G4GRN7_VITBC5.110e-3340.83Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..165
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
IPR036052Tryptophan synthase beta subunit-like PLP-dependent enzymeSUPERFAMILY53686Tryptophan synthase beta subunit-like PLP-dependent enzymescoord: 4..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18513contigEcto-sp13_S_contig18513:183..2981 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18513.5780.1mRNA_Ecto-sp13_S_contig18513.5780.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18513 183..2981 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18513.5780.1 ID=prot_Ecto-sp13_S_contig18513.5780.1|Name=mRNA_Ecto-sp13_S_contig18513.5780.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=165bp
MIHQSNAMVAIAAVVASKPGSSFIYYTKPVPKWLRRNPVGNFARTIALGA
EIMEVHTEDYKRIFGGADGPGASYSEVVPEEALFLPQGGADAAAEEGVSM
LADEIIDYWDENGPPGKELRVILPAGTGTTALFLARHLVPEGIPVLTVPC
AGDSGYLYRQMAKVE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036052Trypto_synt_PLP_dependent