prot_Ecto-sp13_S_contig18505.5777.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18505.5777.1
Unique Nameprot_Ecto-sp13_S_contig18505.5777.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length66
Homology
BLAST of mRNA_Ecto-sp13_S_contig18505.5777.1 vs. uniprot
Match: D8LNK7_ECTSI (BTB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK7_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 2.050e-31
Identity = 58/61 (95.08%), Postives = 58/61 (95.08%), Query Frame = 0
Query:    2 DVHEDHINISRFANHSPFVFATSSFDKTVKAWDSRVRADNAPIYTCHSEMGHVMLSFRWVD 62
            DVHEDHINISRFANHSPFVFATSSFDKTVKAWDSRVRADNAPIYTCHSEMGHVMLSF   D
Sbjct:  221 DVHEDHINISRFANHSPFVFATSSFDKTVKAWDSRVRADNAPIYTCHSEMGHVMLSFSPDD 281          
BLAST of mRNA_Ecto-sp13_S_contig18505.5777.1 vs. uniprot
Match: A0A6H5K536_9PHAE (BTB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K536_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 2.060e-31
Identity = 58/61 (95.08%), Postives = 58/61 (95.08%), Query Frame = 0
Query:    2 DVHEDHINISRFANHSPFVFATSSFDKTVKAWDSRVRADNAPIYTCHSEMGHVMLSFRWVD 62
            DVHEDHINISRFANHSPFVFATSSFDKTVKAWDSRVRADNAPIYTCHSEMGHVMLSF   D
Sbjct:  207 DVHEDHINISRFANHSPFVFATSSFDKTVKAWDSRVRADNAPIYTCHSEMGHVMLSFSPDD 267          
BLAST of mRNA_Ecto-sp13_S_contig18505.5777.1 vs. uniprot
Match: A0A835ZCY9_9STRA (BTB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCY9_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 2.810e-21
Identity = 42/62 (67.74%), Postives = 51/62 (82.26%), Query Frame = 0
Query:    1 MDVHEDHINISRFANHSPFVFATSSFDKTVKAWDSRVRADNAPIYTCHSEMGHVMLSFRWVD 62
            + +H++HINISRFAN SPF+FATSSFDKTVK WD+RVRA++ PIYTC S  GHVM+ F   D
Sbjct:   66 LKIHDNHINISRFANQSPFLFATSSFDKTVKMWDARVRAEHRPIYTCTSSQGHVMVCFSPDD 127          
BLAST of mRNA_Ecto-sp13_S_contig18505.5777.1 vs. uniprot
Match: A0A4D9D8W8_9STRA (BTB domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8W8_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 3.900e-16
Identity = 37/60 (61.67%), Postives = 44/60 (73.33%), Query Frame = 0
Query:    3 VHEDHINISRFANHSPFVFATSSFDKTVKAWDSRVRADNAPIYTCHSEMGHVMLSFRWVD 62
            +H DHINISRFANHSP +FA+SSFDK++K WD R  A   P+YT  SE GHVM+ F   D
Sbjct:  186 IHSDHINISRFANHSPHLFASSSFDKSIKLWDLRC-AGTRPLYTARSEQGHVMVCFSPED 244          
BLAST of mRNA_Ecto-sp13_S_contig18505.5777.1 vs. uniprot
Match: A0A7S1CMT7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CMT7_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 7.240e-16
Identity = 36/61 (59.02%), Postives = 47/61 (77.05%), Query Frame = 0
Query:    2 DVHEDHINISRFANHSPFVFATSSFDKTVKAWDSRVRADNAPIYTCHSEMGHVMLSFRWVD 62
            ++H DHINI+RFA+HSP +FATSSFD+T+K WD R+R D  P YTC S+ G+V+L F   D
Sbjct:   72 EIHTDHINITRFAHHSPNLFATSSFDRTIKVWDLRMR-DRKPNYTCRSDRGNVILCFSPDD 131          
BLAST of mRNA_Ecto-sp13_S_contig18505.5777.1 vs. uniprot
Match: A0A835YWL6_9STRA (Quinon protein alcohol dehydrogenase-like superfamily (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWL6_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 3.260e-14
Identity = 34/46 (73.91%), Postives = 41/46 (89.13%), Query Frame = 0
Query:    2 DVHEDHINISRFANHSPFVFATSSFDKTVKAWDSRVRADNAPIYTC 47
            D+H++HINISRFAN SPF+FATSSFDKTVK WD+RVRAD++  Y C
Sbjct:  202 DIHKNHINISRFANQSPFLFATSSFDKTVKMWDARVRADHS--YVC 245          
BLAST of mRNA_Ecto-sp13_S_contig18505.5777.1 vs. uniprot
Match: A0A7S2W5J7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W5J7_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 5.820e-14
Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = 0
Query:    7 HINISRFANHSPFVFATSSFDKTVKAWDSRVRADNAPIYTCHSEMGHVMLSFRWVD 62
            HINI+RFANH P++FATSSFDKT K WD+R+R+   PIYT  S+ GHV+L F   D
Sbjct:    1 HINIARFANHCPYLFATSSFDKTAKLWDTRMRSVR-PIYTRTSKEGHVLLCFSPDD 55          
BLAST of mRNA_Ecto-sp13_S_contig18505.5777.1 vs. uniprot
Match: A0A7S1XL40_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XL40_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 8.460e-14
Identity = 35/57 (61.40%), Postives = 41/57 (71.93%), Query Frame = 0
Query:    2 DVHEDHINISRFANHSPFVFATSSFDKTVKAWDSRVRADNAPIYTCHSEMGHVMLSF 58
            ++H  HINISRFAN SP VFATSSFD+TVK WD R   D  P+Y C+S  G VM +F
Sbjct:  124 NIHAGHINISRFANTSPHVFATSSFDRTVKTWDIRTPRDR-PLYQCNSTEGLVMCTF 179          
BLAST of mRNA_Ecto-sp13_S_contig18505.5777.1 vs. uniprot
Match: A0A565C9T9_9BRAS (LRRcap domain-containing protein n=1 Tax=Arabis nemorensis TaxID=586526 RepID=A0A565C9T9_9BRAS)

HSP 1 Score: 73.2 bits (178), Expect = 1.450e-13
Identity = 34/61 (55.74%), Postives = 44/61 (72.13%), Query Frame = 0
Query:    2 DVHEDHINISRFANHSPFVFATSSFDKTVKAWDSRVRADNAPIYTCHSEMGHVMLSFRWVD 62
            D+H++HIN+ +FANHSPF+FATSSFDK VK WD R +  + P YT  S  G+VM+ F   D
Sbjct:  567 DMHQEHINVVKFANHSPFLFATSSFDKDVKLWDLR-QEPSRPCYTASSTKGNVMVCFSPDD 626          
BLAST of mRNA_Ecto-sp13_S_contig18505.5777.1 vs. uniprot
Match: A9RMF1_PHYPA (Predicted protein (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RMF1_PHYPA)

HSP 1 Score: 72.4 bits (176), Expect = 2.710e-13
Identity = 34/61 (55.74%), Postives = 43/61 (70.49%), Query Frame = 0
Query:    2 DVHEDHINISRFANHSPFVFATSSFDKTVKAWDSRVRADNAPIYTCHSEMGHVMLSFRWVD 62
            D+H++HIN+ +FANHSP +FATSSFDK +K WD R R    PIYT  S  G+VM+ F   D
Sbjct:  570 DLHKEHINVVKFANHSPQIFATSSFDKEIKMWDLRQRIMQ-PIYTVRSNRGNVMVCFSRDD 629          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18505.5777.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNK7_ECTSI2.050e-3195.08BTB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K536_9PHAE2.060e-3195.08BTB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZCY9_9STRA2.810e-2167.74BTB domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A4D9D8W8_9STRA3.900e-1661.67BTB domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S1CMT7_9STRA7.240e-1659.02Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A835YWL6_9STRA3.260e-1473.91Quinon protein alcohol dehydrogenase-like superfam... [more]
A0A7S2W5J7_9STRA5.820e-1462.50Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S1XL40_9STRA8.460e-1461.40Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A565C9T9_9BRAS1.450e-1355.74LRRcap domain-containing protein n=1 Tax=Arabis ne... [more]
A9RMF1_PHYPA2.710e-1355.74Predicted protein (Fragment) n=1 Tax=Physcomitrium... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..64
e-value: 9.0E-8
score: 33.5
NoneNo IPR availablePANTHERPTHR47201FAMILY NOT NAMEDcoord: 2..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18505contigEcto-sp13_S_contig18505:2375..3324 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18505.5777.1mRNA_Ecto-sp13_S_contig18505.5777.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18505 2375..3342 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18505.5777.1 ID=prot_Ecto-sp13_S_contig18505.5777.1|Name=mRNA_Ecto-sp13_S_contig18505.5777.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=66bp
MDVHEDHINISRFANHSPFVFATSSFDKTVKAWDSRVRADNAPIYTCHSE
MGHVMLSFRWVDGSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf