prot_Ecto-sp13_S_contig1849.5769.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1849.5769.1
Unique Nameprot_Ecto-sp13_S_contig1849.5769.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1005
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1849.5769.1 vs. uniprot
Match: D7G8A2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8A2_ECTSI)

HSP 1 Score: 1568 bits (4060), Expect = 0.000e+0
Identity = 873/985 (88.63%), Postives = 902/985 (91.57%), Query Frame = 0 
Query:   22 MDACAWTEEHTPTPLSTNSSAPGAPPLLRFCLSSTNPGWAFRSALGSSS-DDTTDDMPLPSTASSCPGGRGQPSAVELELVVSRGPGPDFSEHETRVASHAATFLSQALAGIRNRAALSDMKAALRESFRGMEEASDAVAVLVGERDRRAQREAKRKAELDEHCAGEIAAADKVLGRARRDAEELRRQLEGVCSAVTDIGAACGAGDLAGAGAGDDAEEVGLSDGSGTGKAIAVVERAARDALCCSFARVIHLPFAETEANAESETELKEDRIAGDAIPLSQRQIGEGIHTP-ATSDLHGEDGENAIPHPYPDSTSGDGDPGSAEHLQVHVPYYGSRAEPLVLSIRGNSNATQGSFRNRDRIAVGSALAACLGIAFQVLREKEHVRHLKERNEVAAACASAAEAEARTRGHRAVAGMRALVAAAEASKAQXXXEAAAAERADQQTDALRHLLSGLDEAGRKGHAAVAASVERLASAVVPGCEGSVLLTPRRQRSGGSSRSAAGAGGDRRTSFSPDPRTWATATASRMKGAVDGSERFEFGKAWARTVEEAAVQAYSTGKTMCVTTDLSPARSSEGCRGGNDCGGASRQSPVVCFSPVPAVLPVEAERLINGENSRPGTPVSSGRMRAAELQREGVDCVTGSCAMSGSIGTTGLLAWVLRLDAVEAAYDDVDDEEGSGLPSDAVSPLTEVISEPPLPPPPHLPPRISSATNAVIHAVGLALLATDAADEIPGRPERSNAFKRRRSSSRRARHVENRTHEVISSSTGPGETQVAKFSREEELRRLRDGTAALAERVQTLEGRAAGLRASEARSAAALARARADVGATRGELQLAELXXXXERKKNAQATLITGKYGGVEGVSGLCSSRRGERSGGVAGVLRPSCASNKQAGVLGVSDTVGSTLLGWSHPASPAEPVRFPFANVAGSKESETRDGGADVAAMPSVSSPPFTRSGASSAALQHITSVHARLSDSLKRGRVGGTPAVGVV 1004
            MDACAWTEEHTPTP STNSSAPGAPPLLRFCLSST+PGWAF  ALGSSS DDTTDDMPLPSTASSCPGGRG+PSAVELELVVSRGPGPDFSEHET VASHAATFL+QALAG+R+RAALS+MKAALRESFRGMEEAS+AVAVLV ERDRRAQREAKRKAELDEH AGEIAAA+K LGRARR+AEELRRQL+GVCSAV DIGAACGAGDLAGAG GDDAEEVGLSD SGTGK +AVVERAAR+ALCCSFARV+HLPFAE EA AESETELKEDRIA DA+PLS RQ+GEGIHTP ATSDLHGED ENAIPH YPDS SGD  PG A+ LQVH+PYYGSRAEPLVLSIRGNSNA QG FR RDR AVGSALAACLGIA QVLREKEHVR LKER+EVAAAC SAAEAEARTRG RAVAGMRALVAAAEASKAQ   EAAAAERADQQTDALRHLLSGLD+AGRKGHAAVAASVERLASAVVPGCEGSVLLTPRR RSGGSSRSAAGAGGDRRTSFSPDPR WATATASRM GAVDGSERFE GKAWARTVEEAAVQAYSTGKTMCVT DL+PARSS+GCR GND GGASRQSPVV FSPVPAVLPVE ERL+NGEN  PGTPVSSGRMRAAELQRE VDCVTGSCAMSGS+GTTGLLAWVLRLDAVEAA DD DDEEG+G PSDAVSPLTE ISEPP PP  HLP  ISSA NAV+HAVGLAL ATD ADEI GRP RSNAFKRRRSSSRRARHVENR HEVISSSTGPGETQ+AK SREEELRRLRDGT ALAERV+TLEGRAAGLRASEARSAAALARARADVGATRGELQLAE XXXX    NAQAT  T  +GGVEGV GL SSRRGERSGGVAGVLRPSCASNK+AGVLGVSDTVGSTLLGWSHPASPAE V FP  NVAGSKESETRDGGADVAAM SVSS PFTRSGASSAALQHITSVHARLSDSLKRGRVGGT  VGVV
Sbjct:    1 MDACAWTEEHTPTPFSTNSSAPGAPPLLRFCLSSTHPGWAFLPALGSSSSDDTTDDMPLPSTASSCPGGRGRPSAVELELVVSRGPGPDFSEHETSVASHAATFLAQALAGVRDRAALSEMKAALRESFRGMEEASEAVAVLVEERDRRAQREAKRKAELDEHRAGEIAAAEKGLGRARREAEELRRQLKGVCSAVADIGAACGAGDLAGAGTGDDAEEVGLSDESGTGKVLAVVERAARNALCCSFARVVHLPFAEPEAGAESETELKEDRIARDALPLSLRQMGEGIHTPRATSDLHGEDEENAIPHSYPDSISGDDGPGLAKQLQVHIPYYGSRAEPLVLSIRGNSNARQGCFRIRDRFAVGSALAACLGIALQVLREKEHVRRLKERDEVAAACTSAAEAEARTRGQRAVAGMRALVAAAEASKAQALTEAAAAERADQQTDALRHLLSGLDDAGRKGHAAVAASVERLASAVVPGCEGSVLLTPRRHRSGGSSRSAAGAGGDRRTSFSPDPRAWATATASRMHGAVDGSERFECGKAWARTVEEAAVQAYSTGKTMCVTMDLTPARSSQGCRDGNDGGGASRQSPVVYFSPVPAVLPVEPERLVNGENGGPGTPVSSGRMRAAELQREYVDCVTGSCAMSGSVGTTGLLAWVLRLDAVEAACDDGDDEEGAGSPSDAVSPLTEAISEPPSPPRTHLPQCISSAINAVVHAVGLALFATDTADEIHGRPARSNAFKRRRSSSRRARHVENRMHEVISSSTGPGETQLAKSSREEELRRLRDGTTALAERVKTLEGRAAGLRASEARSAAALARARADVGATRGELQLAEXXXXXXXXXNAQATPTTDNFGGVEGVFGLWSSRRGERSGGVAGVLRPSCASNKKAGVLGVSDTVGSTLLGWSHPASPAERVLFPHVNVAGSKESETRDGGADVAAMTSVSSSPFTRSGASSAALQHITSVHARLSDSLKRGRVGGTLTVGVV 985
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1849.5769.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8A2_ECTSI0.000e+088.63Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 843..868
NoneNo IPR availableCOILSCoilCoilcoord: 188..208
NoneNo IPR availableCOILSCoilCoilcoord: 440..460
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..380
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 399..1004
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 381..398

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1849contigEcto-sp13_S_contig1849:5400..8414 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1849.5769.1mRNA_Ecto-sp13_S_contig1849.5769.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1849 5398..8610 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1849.5769.1 ID=prot_Ecto-sp13_S_contig1849.5769.1|Name=mRNA_Ecto-sp13_S_contig1849.5769.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1005bp
MGEAMTEAGAISATAAFFRRRMDACAWTEEHTPTPLSTNSSAPGAPPLLR
FCLSSTNPGWAFRSALGSSSDDTTDDMPLPSTASSCPGGRGQPSAVELEL
VVSRGPGPDFSEHETRVASHAATFLSQALAGIRNRAALSDMKAALRESFR
GMEEASDAVAVLVGERDRRAQREAKRKAELDEHCAGEIAAADKVLGRARR
DAEELRRQLEGVCSAVTDIGAACGAGDLAGAGAGDDAEEVGLSDGSGTGK
AIAVVERAARDALCCSFARVIHLPFAETEANAESETELKEDRIAGDAIPL
SQRQIGEGIHTPATSDLHGEDGENAIPHPYPDSTSGDGDPGSAEHLQVHV
PYYGSRAEPLVLSIRGNSNATQGSFRNRDRIAVGSALAACLGIAFQVLRE
KEHVRHLKERNEVAAACASAAEAEARTRGHRAVAGMRALVAAAEASKAQA
RAEAAAAERADQQTDALRHLLSGLDEAGRKGHAAVAASVERLASAVVPGC
EGSVLLTPRRQRSGGSSRSAAGAGGDRRTSFSPDPRTWATATASRMKGAV
DGSERFEFGKAWARTVEEAAVQAYSTGKTMCVTTDLSPARSSEGCRGGND
CGGASRQSPVVCFSPVPAVLPVEAERLINGENSRPGTPVSSGRMRAAELQ
REGVDCVTGSCAMSGSIGTTGLLAWVLRLDAVEAAYDDVDDEEGSGLPSD
AVSPLTEVISEPPLPPPPHLPPRISSATNAVIHAVGLALLATDAADEIPG
RPERSNAFKRRRSSSRRARHVENRTHEVISSSTGPGETQVAKFSREEELR
RLRDGTAALAERVQTLEGRAAGLRASEARSAAALARARADVGATRGELQL
AELELERERKKNAQATLITGKYGGVEGVSGLCSSRRGERSGGVAGVLRPS
CASNKQAGVLGVSDTVGSTLLGWSHPASPAEPVRFPFANVAGSKESETRD
GGADVAAMPSVSSPPFTRSGASSAALQHITSVHARLSDSLKRGRVGGTPA
VGVV*
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