mRNA_Ecto-sp13_S_contig18485.5765.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18485.5765.1 vs. uniprot
Match: A0A6H5JUF8_9PHAE (APG6 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUF8_9PHAE) HSP 1 Score: 366 bits (939), Expect = 9.470e-125 Identity = 171/173 (98.84%), Postives = 173/173 (100.00%), Query Frame = 1
Query: 1 LNDCFHIWHQGPFGTINGFRVGRLNTHVVDWQEVNAGVGQAAIVLVTVAMAMGVEFSKYLIAPCGSFTKIARSEDGRVLYSLHTDESFSLFPRRNFNFALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGSSYEDWTRALKYMLTDLKWIAAWAAKYLPPC 519
LNDCFHIWHQGPFGTINGFRVGRLNTHVVDWQEVNAGVGQAAIVLVTVAMAMGVEF+KYLIAPCGSFTKIARSEDGRVLYSLHTDESFSLFPRRNFNFALKAFLHCLGEVGDHVQEHDPTL+LPYHIKEKEGTVGGLPVALGSSYEDWTRALKYMLTDLKWIAAWAAKYLPPC
Sbjct: 245 LNDCFHIWHQGPFGTINGFRVGRLNTHVVDWQEVNAGVGQAAIVLVTVAMAMGVEFTKYLIAPCGSFTKIARSEDGRVLYSLHTDESFSLFPRRNFNFALKAFLHCLGEVGDHVQEHDPTLKLPYHIKEKEGTVGGLPVALGSSYEDWTRALKYMLTDLKWIAAWAAKYLPPC 417
BLAST of mRNA_Ecto-sp13_S_contig18485.5765.1 vs. uniprot
Match: A0A836CRQ0_9STRA (Autophagy protein Apg6-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRQ0_9STRA) HSP 1 Score: 189 bits (481), Expect = 2.430e-55 Identity = 96/197 (48.73%), Postives = 121/197 (61.42%), Query Frame = 1
Query: 4 NDCFHIWHQGPFGTINGFRVGRLNTHVVDWQEVNAGVGQAAIVLVTVAMAMGVEFSKYL-------------IAPCGSFTKIARSEDG----------------RVLYSLHTDESFSLFPRRNFNFALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGSSYEDWTRALKYMLTDLKWIAAWAAKY 507
ND FHIW+ G TINGFRVGRL + V W E+NAG+GQAAI L VA AM ++FS+Y+ + P GSF+++A S R L++L +DE FSLFP R+ N AL+AF C+GE G + DPTL LP+ + + GTVGG PVALGS E WTRA+KY LT+LKW+ AW AKY
Sbjct: 210 NDAFHIWYAGALATINGFRVGRLPSVQVGWPEINAGLGQAAIALTLVAGAMKLKFSRYIPTYARAEPPSRHAVLPLGSFSRMAASNXXXXXXXXXXXXXXXXXXRTLHALFSDEGFSLFPHRSLNAALRAFAQCVGEAGQRAAQRDPTLALPHRVDDAAGTVGGAPVALGSDLEAWTRAMKYTLTNLKWLLAWVAKY 406
BLAST of mRNA_Ecto-sp13_S_contig18485.5765.1 vs. uniprot
Match: A0A7S3H0Z9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H0Z9_9STRA) HSP 1 Score: 169 bits (429), Expect = 4.650e-49 Identity = 77/170 (45.29%), Postives = 108/170 (63.53%), Query Frame = 1
Query: 1 LNDCFHIWHQGPFGTINGFRVGRLNTHVVDWQEVNAGVGQAAIVLVTVAMAMGVEFSKYLIAPCGSFTKIARSEDGRVLYSLHTDE-SFSLFPRRNFNFALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGSSYEDWTRALKYMLTDLKWIAAWAAKY 507
LND F++W+ GPF TIN F++G L V+ E+NA +GQAA+VL + G+EF ++ I P GSF KI +++D R Y L D SFS FP+RNFN AL F+ C+ E+G+++ +DPTL +PY I+ E + G E WT ALK+ML ++KWI AW K+
Sbjct: 135 LNDAFYVWYTGPFATINAFKLGNLVNKPVESTEINAALGQAALVLNIITSRCGIEFKQFHIVPMGSFAKILKADDRRTSYPLFIDAGSFSFFPKRNFNLALSGFMQCIHELGEYISAYDPTLSVPYKIEVSESKIADKSFVYGGDEEVWTHALKHMLANIKWIIAWYCKH 304
BLAST of mRNA_Ecto-sp13_S_contig18485.5765.1 vs. uniprot
Match: A0A4D9D4J3_9STRA (APG6 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4J3_9STRA) HSP 1 Score: 163 bits (412), Expect = 8.110e-47 Identity = 83/189 (43.92%), Postives = 119/189 (62.96%), Query Frame = 1
Query: 4 NDCFHIWHQGPFGTINGFRVGRLNTHV-VDWQEVNAGVGQAAIVLVTVAMAMGVEFSKYLIAPCGSFTKIARSE------DGRVL-----------YSLHTDES-FSLFPRRNFNFALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGSSYED-WTRALKYMLTDLKWIAAWAAKYL 510
NDCFH+WH GPF T+NG +GRL V+W ++NAG+GQA ++L T+ G F + + P GSF+KI RS + +V+ S + DE+ + FPRRN N AL AFL C+ E G HV+ DPT+RLP+ +++ + +GGLP+ ED W RALKY+LTDLKW++AW+A+++
Sbjct: 92 NDCFHVWHSGPFATMNGCSIGRLPAFAAVEWIDINAGLGQAILLLDTLVKQTGFRFRRLELVPFGSFSKILRSPCDLSDVETKVMPNSPRFTASNAMSFYYDEANLAFFPRRNMNAALVAFLQCVEEFGSHVEGLDPTIRLPHRVQDNK--IGGLPIVFTPGEEDTWNRALKYLLTDLKWLSAWSARHV 278
BLAST of mRNA_Ecto-sp13_S_contig18485.5765.1 vs. uniprot
Match: A0A067BKQ5_SAPPC (APG6 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BKQ5_SAPPC) HSP 1 Score: 162 bits (410), Expect = 1.240e-46 Identity = 81/170 (47.65%), Postives = 111/170 (65.29%), Query Frame = 1
Query: 1 LNDCFHIWHQGPFGTINGFRVGRLNTHVVDWQEVNAGVGQAAIVLVTVAMAMGVEFSKYLIAPCGSFTKI--ARSEDGRVLYSLHTDESFSLFPRRNFNFALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGSSYEDWTRALKYMLTDLKWIAAWAAK 504
ND FHIWH+G FGTING R+GRL + V+W E+NA +GQA ++L TVA + F+++ GS++K+ A S+D R Y L++D SF F R+ FN AL FL C+ E G +P+LR PY I + G +G L +++G + E WTRALKY+LT LKW+ AW AK
Sbjct: 96 FNDTFHIWHEGSFGTINGLRLGRLPSKPVEWAEINAALGQATLLLATVASRANLNFARHTPVARGSYSKMLTAPSKDKRKEYPLYSDGSF--FQRQKFNQALVFFLECVDEAGVRAMREEPSLRFPYKIYK--GKIGELAISVGGNDEQWTRALKYLLTHLKWLLAWIAK 261
BLAST of mRNA_Ecto-sp13_S_contig18485.5765.1 vs. uniprot
Match: A0A3M6V8C9_9STRA (APG6 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V8C9_9STRA) HSP 1 Score: 159 bits (401), Expect = 1.390e-46 Identity = 78/167 (46.71%), Postives = 107/167 (64.07%), Query Frame = 1
Query: 4 NDCFHIWHQGPFGTINGFRVGRLNTHVVDWQEVNAGVGQAAIVLVTVAMAMGVEFSKYLIAPCGSFTKIARSEDGRVLYSLHTDESFSLFPRRNFNFALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGSSYEDWTRALKYMLTDLKWIAAWAAK 504
ND FHIWH G FGTING R+GRL + V+W E+NA +GQA ++L T+A G EFS+ + P GSF+++ +LYS +F RR FN A+ FL C+ + G + +P L+ PY ++ G +GGLP++LG+ E WTRALKYMLT LKW+ AW +K
Sbjct: 12 NDVFHIWHDGLFGTINGLRLGRLPSKPVEWVEINAAMGQAVLLLATIADRAGFEFSRNRLVPRGSFSRVVN-----ILYS-----DGGMFRRRGFNQAMILFLECVEDAGRRAMKEEPLLKFPYKVER--GKIGGLPISLGND-EQWTRALKYMLTHLKWLLAWISK 165
BLAST of mRNA_Ecto-sp13_S_contig18485.5765.1 vs. uniprot
Match: A0A1V9ZC45_9STRA (Beclin-1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZC45_9STRA) HSP 1 Score: 164 bits (416), Expect = 1.250e-44 Identity = 81/173 (46.82%), Postives = 113/173 (65.32%), Query Frame = 1
Query: 1 LNDCFHIWHQGPFGTINGFRVGRLNTHVVDWQEVNAGVGQAAIVLVTVAMAMGVEFSKYLIAPCGSFTKIARS--EDGRVLYSLHTDESFSLFPRRNFNFALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGSSYEDWTRALKYMLTDLKWIAAWAAKYLP 513
+ND FHIWH+G FGTING R+GRL + V+W E+NA +GQA ++L TVA ++F+++ GS++K+ S ++ R Y L++D SF F R+ FN AL FL C+ E G +PTLR PY I + G +G L +++G + E WTRALKY+LT LKW+ AW AK P
Sbjct: 445 MNDTFHIWHEGSFGTINGLRLGRLPSKPVEWTEINAALGQATLLLATVASRANLQFARHTPVARGSYSKMLTSHGKERRREYPLYSDGSF--FQRQKFNQALVFFLECVDEAGQRAMREEPTLRFPYKIFK--GKIGELAISVGGNDEQWTRALKYLLTHLKWLLAWVAKRYP 613
BLAST of mRNA_Ecto-sp13_S_contig18485.5765.1 vs. uniprot
Match: A0A3R7EER2_9STRA (APG6 domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7EER2_9STRA) HSP 1 Score: 159 bits (401), Expect = 1.400e-44 Identity = 79/174 (45.40%), Postives = 107/174 (61.49%), Query Frame = 1
Query: 1 LNDCFHIWHQGPFGTINGFRVGRLNTHVVDWQEVNAGVGQAAIVLVTVAMAMGVEFSKYLIAPCGSFTKIARSEDGRVL---YSLHTDESFSLFPRRNFNFALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGSSYEDWTRALKYMLTDLKWIAAWAAKYLP 513
ND FHIWH+GPFGTING R+GRL + V+W E+NA +GQA ++L TVA G+ F+K++ GS++K+ ++ V Y L D F R+ FN ALK L C+ E G +P+LR PY I + +G L + +G + E WTRALKY+LT LKW+ AW AK P
Sbjct: 164 FNDAFHIWHEGPFGTINGLRLGRLPSRPVEWAEINAALGQATLLLTTVAQRAGMVFAKHVPVARGSYSKMLVAQGSGVKRKEYPLFNDGGF--LQRQKFNTALKCLLECVDEAGRQAIVEEPSLRFPYKITRAK--IGDLSIEVGGNDEQWTRALKYLLTHLKWLLAWVAKRYP 333
BLAST of mRNA_Ecto-sp13_S_contig18485.5765.1 vs. uniprot
Match: A0A2D4C494_PYTIN (Beclin-1-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C494_PYTIN) HSP 1 Score: 163 bits (412), Expect = 1.820e-44 Identity = 80/170 (47.06%), Postives = 110/170 (64.71%), Query Frame = 1
Query: 4 NDCFHIWHQGPFGTINGFRVGRLNTHVVDWQEVNAGVGQAAIVLVTVAMAMGVEFSKYLIAPCGSFTKIARSEDGRVLYSLHTDESFSLFPRRNFNFALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGSSYEDWTRALKYMLTDLKWIAAWAAKYLP 513
ND FHIWH G FGTING R+GRL T V+W E+NA +GQA ++L T+A +F++ + P GSF+++A YSL++D +F RR FN AL FL C+ + G + +P+L+ PY I+ G +G LP++LG+ E WT+ALKYMLT LKW+ AW AK P
Sbjct: 378 NDVFHIWHDGHFGTINGLRLGRLPTRPVEWVEINAALGQAVLLLATIAERANFDFTRNKLVPRGSFSRVANMYGKE--YSLYSDGG--MFRRRGFNQALVLFLECVDDAGKQAMKEEPSLKFPYKIQR--GKIGDLPISLGND-EQWTKALKYMLTHLKWLLAWVAKRYP 540
BLAST of mRNA_Ecto-sp13_S_contig18485.5765.1 vs. uniprot
Match: A0A7S2C4Q6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C4Q6_9STRA) HSP 1 Score: 154 bits (390), Expect = 1.970e-44 Identity = 77/178 (43.26%), Postives = 113/178 (63.48%), Query Frame = 1
Query: 4 NDCFHIWHQGPFGTINGFRVGRLNTHVVDWQEVNAGVGQAAIVLVTVAMAMGVEFSKYLIAPCGSFTKIA-RSEDGRV-----LYSLHTDES--FSLFPRRNFNFALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGSSYED--WTRALKYMLTDLKWIAAWAAKY 507
NDCF+IWH GPFGTINGFR+GRL V+W E+NA +GQ A++L T+ ++ S L+ P GS++++A + G+V ++L+ + S + +F+ AL+ L +GE G+++ E DP RLPY + E + +P+ G S D WTRALK+MLTD+KWI AWAAK+
Sbjct: 26 NDCFYIWHAGPFGTINGFRLGRLPVETVEWHEINAALGQVALLLETIENETPLQLSLTLL-PLGSYSQVAIPNSQGKVDEKSKRFNLYASDGGVLSFGQKGSFHKALEYLLQIIGEAGNYISEQDPAFRLPYAVSEGGRYINNIPITYGGSNSDELWTRALKFMLTDVKWIVAWAAKH 202 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18485.5765.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18485.5765.1 >prot_Ecto-sp13_S_contig18485.5765.1 ID=prot_Ecto-sp13_S_contig18485.5765.1|Name=mRNA_Ecto-sp13_S_contig18485.5765.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=174bp LNDCFHIWHQGPFGTINGFRVGRLNTHVVDWQEVNAGVGQAAIVLVTVAMback to top mRNA from alignment at Ecto-sp13_S_contig18485:210..1789+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18485.5765.1 ID=mRNA_Ecto-sp13_S_contig18485.5765.1|Name=mRNA_Ecto-sp13_S_contig18485.5765.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1580bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18485:210..1789+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18485:210..1789+ >mRNA_Ecto-sp13_S_contig18485.5765.1 ID=mRNA_Ecto-sp13_S_contig18485.5765.1|Name=mRNA_Ecto-sp13_S_contig18485.5765.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=522bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18485:210..1789+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |