mRNA_Ecto-sp13_S_contig18473.5760.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18473.5760.1 vs. uniprot
Match: A0A6H5KV97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV97_9PHAE) HSP 1 Score: 486 bits (1252), Expect = 1.770e-167 Identity = 269/325 (82.77%), Postives = 279/325 (85.85%), Query Frame = 1
Query: 175 MRWSTTEARRRPRISALTPAGARSLPATLMAWAASPAAGSAATRCSN-RRRLATARAASRTTTRLPVSAHARRRHQAIPPLSSAETEAPQAAAGQSLFIFGVGYVATAVALTFLMKGWTVHGTCTDPRKVKSLGDQGIKAFIFDDWSGPMMQPEPLSALASATCILSTVPPALQSGADPVLVAHEAELKWARSKGNLRWVGYLSSTGVYGDRGGGWVTEEDEPWPAAPRTKARLKAERSWLRLYERDGLPVHVFRLAGIYGPGRSALDAVARHNGDIRLAGSDDGTMVSRTHVSDIVGVLEASIERPEPGMVLNVADDLPSTRYE 1146
MR S E RR+PRISALTP G RSL A AWAASPAAGSAA RCSN RRR ATARAASRTTTRLP +AHARRR QAIPPLSSAETEAP+AAAGQSLFIFGVGYVATAVALTFL KGWTVHGTCTDPRKVKSLGDQGIKAFIFDDWSGPMMQPEPLSALASATC+LSTVPPALQSGADPVLVAHEAEL+WARSKGNLRWVGYLSSTG +G W L+ ++ R ERDGLPVHVFRLAGIYGPGRSALDAVARHNGDIRLAGSDDGTMVSRTHV DIVGV+EASIERPEPGMVLNVADDLPSTRYE
Sbjct: 1 MRCSRPETRRKPRISALTPTGVRSLSAAQTAWAASPAAGSAAIRCSNNRRRQATARAASRTTTRLPANAHARRRRQAIPPLSSAETEAPEAAAGQSLFIFGVGYVATAVALTFLRKGWTVHGTCTDPRKVKSLGDQGIKAFIFDDWSGPMMQPEPLSALASATCVLSTVPPALQSGADPVLVAHEAELQWARSKGNLRWVGYLSSTG----KGTMW-----------------LRMDKRACR-QERDGLPVHVFRLAGIYGPGRSALDAVARHNGDIRLAGSDDGTMVSRTHVFDIVGVVEASIERPEPGMVLNVADDLPSTRYE 303
BLAST of mRNA_Ecto-sp13_S_contig18473.5760.1 vs. uniprot
Match: D7FKG5_ECTSI (NAD-dependent epimerase/dehydratase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG5_ECTSI) HSP 1 Score: 344 bits (883), Expect = 1.570e-113 Identity = 169/176 (96.02%), Postives = 173/176 (98.30%), Query Frame = 1
Query: 619 MMQPEPLSALASATCILSTVPPALQSGADPVLVAHEAELKWARSKGNLRWVGYLSSTGVYGDRGGGWVTEEDEPWPAAPRTKARLKAERSWLRLYERDGLPVHVFRLAGIYGPGRSALDAVARHNGDIRLAGSDDGTMVSRTHVSDIVGVLEASIERPEPGMVLNVADDLPSTRYE 1146
MMQPEPLS LASATC+LSTVPPALQSGADPVLVAHEAEL+WARSKGNLRWVGYLSSTGVYGDRGGGWVTEEDEPWPAAPRTKARLKAERSWLRL+ERDGLPVHVFRLAGIYGPGRSALDAVARHNGDIRLAGSDDGTMVSRTHVSDIVGV+EASIE P PGMVLNVADDLPSTRYE
Sbjct: 1 MMQPEPLSVLASATCVLSTVPPALQSGADPVLVAHEAELQWARSKGNLRWVGYLSSTGVYGDRGGGWVTEEDEPWPAAPRTKARLKAERSWLRLHERDGLPVHVFRLAGIYGPGRSALDAVARHNGDIRLAGSDDGTMVSRTHVSDIVGVVEASIELPAPGMVLNVADDLPSTRYE 176
BLAST of mRNA_Ecto-sp13_S_contig18473.5760.1 vs. uniprot
Match: D7FKG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG4_ECTSI) HSP 1 Score: 286 bits (732), Expect = 5.350e-93 Identity = 168/201 (83.58%), Postives = 177/201 (88.06%), Query Frame = 1
Query: 1 MRRPSSTSSVFLLWASLKGVDAGRSSLTARTMAASPPGAATSGSTSTTFCSSSGHSSRMRWSTTEARRRPRISALTPAGARSLPATLMAWAASPAAGSAATRCSN-RRRLATARAASRTTTRLPVSAHARRRHQAIPPLSSAETEAPQAAAGQSLFIFGVGYVATAVALTFLMKGWTVHGTCTDPRKVKSLGDQGIKAFIF 600
MRRPSSTSSVFLLWASL+GVDAGRSSL A MAASPPGAATSG+T+TTFCSSSGH SRMRWS E R++PRISALTP GARSL A AWA SPAAGSAATRCSN RRRLA RAAS TTTRLP +AHARRR QAIPPLSSA+TE P+AAAGQSLFIFGVGYVATAVALTFL KGWTVHGTCTDPRKVKSLGDQGIK +
Sbjct: 1 MRRPSSTSSVFLLWASLQGVDAGRSSLIAGRMAASPPGAATSGATATTFCSSSGHGSRMRWSRPEERKKPRISALTP-GARSLSAAQTAWATSPAAGSAATRCSNNRRRLA--RAASHTTTRLPANAHARRRRQAIPPLSSADTEDPEAAAGQSLFIFGVGYVATAVALTFLRKGWTVHGTCTDPRKVKSLGDQGIKRELL 198
BLAST of mRNA_Ecto-sp13_S_contig18473.5760.1 vs. uniprot
Match: A0A7S0SU05_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SU05_9STRA) HSP 1 Score: 198 bits (504), Expect = 2.920e-57 Identity = 94/204 (46.08%), Postives = 137/204 (67.16%), Query Frame = 1
Query: 535 GTCTDPRKVKSLGDQGIKAFIFDDWSGPMMQPEPLSALASATCILSTVPPALQSGADPVLVAHEAELKWARSKGNLRWVGYLSSTGVYGDRGGGWVTEEDEPWPAAPRTKARLKAERSWLRLYERDGLPVHVFRLAGIYGPGRSALDAVARHNGDIRLAGSDDGTMVSRTHVSDIVGVLEASIERPEPGMVLNVADDLPSTRYE 1146
GT T K+K + GI A++FD+ SGPM+ + L+ L +A+ +L+T+PP ++G D VL H ++ A KG+ +W+GY+SSTG+YGD G WV E P +T AR KA+ +W L+ R+ LP+H+FR AGIYGP RS LD + + NGD + G+DD T++SR H+ D+V VL AS+ P G+ +NVADDLP+TR++
Sbjct: 1 GTSTSVSKIKHYKNNGINAYLFDNLSGPMIDNDALNKLYNASHVLNTIPPDQENGEDYVLTCHGNDITQAVIKGSTKWIGYISSTGIYGDCKGDWVNENSPINPENRKTLARSKADNAWWTLHTRNSLPIHIFRCAGIYGPNRSILDILKKSNGDFKACGADDTTIISRIHIKDLVNVLIASMILPSNGLKVNVADDLPATRFD 204
BLAST of mRNA_Ecto-sp13_S_contig18473.5760.1 vs. uniprot
Match: A0A2D6JW02_9PROT (NAD(P)-dependent oxidoreductase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6JW02_9PROT) HSP 1 Score: 191 bits (485), Expect = 1.170e-54 Identity = 110/225 (48.89%), Postives = 137/225 (60.89%), Query Frame = 1
Query: 460 LFIFGVGYVATAVALTFLMKGWTVHGTCTDPRKVKSLGDQGIKAFIFDDWSGPMMQPEPLSALASATCILSTVPPALQSGADPVLVAHEAELKWARSKGNLRWVGYLSSTGVYGDRGGGWVTEEDEPWPAAPRTKARLKAERSWLRLYERDGLPVHVFRLAGIYGPGRSALDAVARHNGDIRLAGSDDGTMVSRTHVSDIVGVLEASIERPEPGMVLNVADDLPS 1134
LF FG+GY A +A L +GW V GTC P + L D GIKA +FD P+ SAL+ T +LS+VPP DPVL H ++++ + + WVGYLSSTGVYGD GG VTE+ P++ R + R +AE +WL L GLPVHVFRLAGIYGPGRSALD V G R+ G M SR H+ DI VL AS++RP+PG V NV DD P+
Sbjct: 10 LFCFGLGYSAGRLARLLLARGWAVAGTCQSPDRQAELADWGIKALVFDP-ERPLADAP--SALSGVTHLLSSVPP--DENGDPVLARHGSDIEAMKG---VSWVGYLSSTGVYGDTGGNTVTEDSAVNPSSDRGRRRAEAEAAWLALENDQGLPVHVFRLAGIYGPGRSALDQVRAGRGK-RI--DKPGHMFSRIHIDDIAQVLRASMDRPDPGAVYNVCDDEPA 223
BLAST of mRNA_Ecto-sp13_S_contig18473.5760.1 vs. uniprot
Match: A0A1Y6BAE2_9HYPH (Nucleoside-diphosphate-sugar epimerase n=1 Tax=Tistlia consotensis USBA 355 TaxID=560819 RepID=A0A1Y6BAE2_9HYPH) HSP 1 Score: 189 bits (480), Expect = 6.860e-54 Identity = 109/222 (49.10%), Postives = 139/222 (62.61%), Query Frame = 1
Query: 460 LFIFGVGYVATAVALTFLMKGWTVHGTCTDPRKVKSLGDQGIKAFIFDDWSGPMMQPEPLSALASATCILSTVPPALQSGADPVLVAHEAELKWARSKGNLRWVGYLSSTGVYGDRGGGWVTEEDEPWPAAPRTKARLKAERSWLRLYERDGLPVHVFRLAGIYGPGRSALDAVARHNGDIRLAGSDDGTMVSRTHVSDIVGVLEASIERPEPGMVLNVADD 1125
LF FG+G+ A A+A L GW V GT DP K ++L +GI+AF+F + P+ PE +ALA + +L++ PP + DPVL AH A + + L+WVGYLS+TGVYG+R GGWV E P+ R + R+ AE +WL L+ R GLPVH+FRLAGIYGPGRS LD+VA G R G + SR HV DI VLEAS+ RP PG NV DD
Sbjct: 8 LFCFGLGFSARALARRRLADGWRVAGTTRDPAKAEALAAEGIEAFVFAN-GRPLEDPE--AALAGTSHLLASAPPDAEG--DPVLAAHGAAIA---ALPGLQWVGYLSTTGVYGNRAGGWVDEASALTPSGERGRRRVAAEAAWLELHRRHGLPVHLFRLAGIYGPGRSQLDSVA--GGRARRI-VKPGQVFSRIHVEDIATVLEASMARPNPGAAYNVCDD 218
BLAST of mRNA_Ecto-sp13_S_contig18473.5760.1 vs. uniprot
Match: A0A369TAJ2_9PROT (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Ferruginivarius sediminum TaxID=2661937 RepID=A0A369TAJ2_9PROT) HSP 1 Score: 187 bits (475), Expect = 3.200e-53 Identity = 111/229 (48.47%), Postives = 138/229 (60.26%), Query Frame = 1
Query: 460 LFIFGVGYVATAVALTFLMKGWTVHGTCTDPRKVKSLGDQGIKAFIFDDWSGPMMQPEPLSALASATCILSTVPPALQSGADPVLVAHEAELKWARSKGNLRWVGYLSSTGVYGDRGGGWVTEEDEPWPAAPRTKARLKAERSWLRLYERDGLPVHVFRLAGIYGPGRSALDAVARHNGDIRLAGSDDGTMVSRTHVSDIVGVLEASIERPEPGMVLNVADDLPSTRYE 1146
LF FG+GY A +A L +GW V GT D K L G++A +FD P+ + +ALA T +LS+VPP + DPVL H ++ A G L W GYLS+TGVYG+R GGWV EE E P + R + R+ AE +WLRL+ G+PVHVFRLAGIYGPGRS LDAV R R+ G + SR HV DI VL+AS+ RP PG V NV DD P+ E
Sbjct: 6 LFCFGLGYSARRLADRLLAEGWRVAGTTRDEAKAGELRAAGVEACVFDRGQ-PLA--DAATALAGTTHLLSSVPPNREG--DPVLDHHAGDI--AALAGRLAWAGYLSTTGVYGNREGGWVDEESELHPTSARAERRVAAEHAWLRLHAGQGIPVHVFRLAGIYGPGRSPLDAV-RQGRAKRI--DKPGQVFSRIHVEDIATVLQASMARPNPGRVYNVCDDEPAAPAE 224
BLAST of mRNA_Ecto-sp13_S_contig18473.5760.1 vs. uniprot
Match: A0A286GUB3_9PROT (Nucleoside-diphosphate-sugar epimerase n=1 Tax=Caenispirillum bisanense TaxID=414052 RepID=A0A286GUB3_9PROT) HSP 1 Score: 186 bits (471), Expect = 1.260e-52 Identity = 108/225 (48.00%), Postives = 133/225 (59.11%), Query Frame = 1
Query: 460 LFIFGVGYVATAVALTFLMKGWTVHGTCTDPRKVKSLGDQGIKAFIFDDWSGPMMQPEPLSALASATCILSTVPPALQSGADPVLVAHEAELKWARSKGNLRWVGYLSSTGVYGDRGGGWVTEEDEPWPAAPRTKARLKAERSWLRLYERDGLPVHVFRLAGIYGPGRSALDAVARHNGDIRLAGSDDGTMVSRTHVSDIVGVLEASIERPEPGMVLNVADDLPS 1134
LF+FG+G+ T +A FL GW V GT K L QGI+A+ FD P P ALA AT ++ +VPP DPV H A+L S LRW+GYLS+TGVYGDR GGWV E P R++ R++AE +WL L GLPVHVFRLAGIYGPGRSA+D V +G R + + R HV DI VL+AS+ RP PG + NVADD P+
Sbjct: 7 LFVFGLGFSGTVLARRFLAAGWRVAGTSRSAEKRDRLAAQGIEAYAFD-----RDHPLPAEALAGATHVVVSVPP--DEAGDPVAAVHGADLAALPS---LRWLGYLSTTGVYGDRRGGWVDETTPVAPDVGRSERRVRAEEAWLALARDHGLPVHVFRLAGIYGPGRSAIDMV--RSGRARRV-IKENQVFCRIHVEDIATVLQASMARPRPGAIYNVADDEPA 218
BLAST of mRNA_Ecto-sp13_S_contig18473.5760.1 vs. uniprot
Match: A0A168SBK3_9CYAN (NAD(P)-dependent oxidoreductase n=1 Tax=Leptolyngbya valderiana BDU 20041 TaxID=322866 RepID=A0A168SBK3_9CYAN) HSP 1 Score: 186 bits (472), Expect = 2.050e-52 Identity = 105/223 (47.09%), Postives = 138/223 (61.88%), Query Frame = 1
Query: 460 LFIFGVGYVATAVALTFLMKGWTVHGTCTDPRKVKSLG-DQGIKAFIFDDWSGPMMQPEPLSALASATCILSTVPPALQSGADPVLVAHEAELKWARSKGNLRWVGYLSSTGVYGDRGGGWVTEEDEPWPAAPRTKARLKAERSWLRLYERDGLPVHVFRLAGIYGPGRSALDAVARHNGDIRLAGSDDGTMVSRTHVSDIVGVLEASIERPEPGMVLNVADD 1125
LF+FG+GY A +A ++GW + GT +K +L +G +AF+FD + P+ +P +ALA T +LS+VPP + DPVL AH ++ G L+W+GYLS+TGVYGDR GGWV E P R + R+ AER WLRL++ GLPVH+FRLAGIYGPGRS A+ R R+ G + SR HV+DI VL ASI+RP PG NV DD
Sbjct: 22 LFVFGLGYSARQLAADLSVQGWEIAGTTRSAQKASALAASEGAEAFVFDRGT-PLS--DPATALAGTTHLLSSVPPDAEG--DPVLDAHFDDIVALAHGGELQWIGYLSTTGVYGDRAGGWVDETSALEPTGERGRRRVAAERHWLRLWQEHGLPVHLFRLAGIYGPGRSQFAAL-RAGRSRRI--DKPGQVFSRIHVADIAQVLAASIDRPNPGAAYNVCDD 236
BLAST of mRNA_Ecto-sp13_S_contig18473.5760.1 vs. uniprot
Match: A0A2H6AT94_9BACT (Uncharacterized protein n=1 Tax=bacterium HR39 TaxID=2035434 RepID=A0A2H6AT94_9BACT) HSP 1 Score: 185 bits (470), Expect = 3.260e-52 Identity = 109/228 (47.81%), Postives = 136/228 (59.65%), Query Frame = 1
Query: 460 LFIFGVGYVATAVALTFLMKGWTVHGTCTDPRKVKSLGDQGIKAFIFDDWSGPMMQPEPLS----ALASATCILSTVPPALQSGADPVLVAHEAELKWARSKGNLRWVGYLSSTGVYGDRGGGWVTEEDEPWPAAPRTKARLKAERSWLRLYERDGLPVHVFRLAGIYGPGRSALDAVARHNGDIRLAGSDDGTMVSRTHVSDIVGVLEASIERPEPGMVLNVADDLP 1131
LF FG GYVA +A L +GWTV GT DP K + L GI+ F+F + PL AL+ T +L ++PP DPVL H L R+ +LRWVG+L +T VYGDR GGWV+EEDEP P R K RL+AER+WL GLPVH+FRLAGIYGPGR+A+ ++ + R+ G + R HV DIV VL AS+ RP PG + NVADD P
Sbjct: 20 LFCFGCGYVAQHLAAALLAEGWTVRGTTRDPAKAEELRAAGIEPFLF-------ARGRPLGDSGRALSGVTHLLVSIPP--DEAGDPVLDEHGEHL---RALSSLRWVGWLGTTAVYGDRQGGWVSEEDEPRPGLERAKWRLRAERAWLG----SGLPVHIFRLAGIYGPGRNAIRSLLDGHAH-RIV--KPGQVFGRIHVDDIVAVLRASMARPHPGRIYNVADDEP 228 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18473.5760.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18473.5760.1 >prot_Ecto-sp13_S_contig18473.5760.1 ID=prot_Ecto-sp13_S_contig18473.5760.1|Name=mRNA_Ecto-sp13_S_contig18473.5760.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=382bp MRRPSSTSSVFLLWASLKGVDAGRSSLTARTMAASPPGAATSGSTSTTFCback to top mRNA from alignment at Ecto-sp13_S_contig18473:3..3349+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18473.5760.1 ID=mRNA_Ecto-sp13_S_contig18473.5760.1|Name=mRNA_Ecto-sp13_S_contig18473.5760.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3347bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18473:3..3349+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18473:3..3349+ >mRNA_Ecto-sp13_S_contig18473.5760.1 ID=mRNA_Ecto-sp13_S_contig18473.5760.1|Name=mRNA_Ecto-sp13_S_contig18473.5760.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1146bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18473:3..3349+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |