prot_Ecto-sp13_S_contig1847.5759.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1847.5759.1
Unique Nameprot_Ecto-sp13_S_contig1847.5759.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length461
Homology
BLAST of mRNA_Ecto-sp13_S_contig1847.5759.1 vs. uniprot
Match: A0A6H5J8L2_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8L2_9PHAE)

HSP 1 Score: 738 bits (1904), Expect = 3.940e-259
Identity = 427/478 (89.33%), Postives = 430/478 (89.96%), Query Frame = 0
Query:    1 MAATGAPSEGSEASRDRRGMVTGQDEYPAELRLKDTLLRAARVGLARHTSGAGSVDNTKNXXXXXXXXXXXXXXXXXXXXXSNSG---------NISSGRKNKGHMGDPFGGENQATAPPAQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC--------GVDRNVSLLDLNDDENNLRTTCDACTIGKIKCDGGHPCKRCQRRGSECVYREKKRCGPKRRKLSSRDDSDDDGSHGGSIAGHLSEGGGGFRVLTSREQEFLAKFYSSVNKFIPLTCLTVIRDAMNPLPLDVVPGLAASEAEENTYHARKAVLLGCVAVGAVFCGDQASAGAYMSRAQIHLKDCFDALIPEVVSCYLVMVVYHLHFLDRSKVYRYIGFAQQAYRELAQSNKLGVGGYVRDSLRVLSTFLHVTCNNEIRPEEVDLRAETNPEPGGGSLSRIIALFSHVLLQLYRKTDRVEAARASPQKPVPTLATLGAM 461
            MAATGAPSEGSEASRDR GMVTGQDEYPAELRLKDTLLRAARVGLARHTSG GS+DN  +                XXXXX             NISSGRKNKGHMGDPFGGENQATAP AQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXX         GVDRNVSLLDLNDDENNLRTTCDACTIGKIKCDGGHPCKRCQRRGSECVYREKKRCGPKRRKLSSRDDSDDDGSHGG+ AGHL EGGGGFRVLTSREQEFLAKFYSSVNKFIPLTCLTVIRDAMNPLPLDVVPGLAASEAEENTYHARKAVLLGCVAVGAVFCGDQASAGAYMSRAQIHLKDCFDALIPEVVSCYLVMVVYHLHFLDRSKVYRYIGFAQQ YRELAQSNKLGVG YVRDSLRVLSTFLHVTCNNEIRPEEVDLRAETNPEPGGGSLSRIIALFSHVLLQLYRKTDRVEAARASPQKPVPTLATLGAM
Sbjct:    1 MAATGAPSEGSEASRDRHGMVTGQDEYPAELRLKDTLLRAARVGLARHTSGTGSIDNDSDNNRDNKKNPSSISSNGXXXXXXXXXXXXXXXXXXNISSGRKNKGHMGDPFGGENQATAPHAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVDRNVSLLDLNDDENNLRTTCDACTIGKIKCDGGHPCKRCQRRGSECVYREKKRCGPKRRKLSSRDDSDDDGSHGGNFAGHLGEGGGGFRVLTSREQEFLAKFYSSVNKFIPLTCLTVIRDAMNPLPLDVVPGLAASEAEENTYHARKAVLLGCVAVGAVFCGDQASAGAYMSRAQIHLKDCFDALIPEVVSCYLVMVVYHLHFLDRSKVYRYIGFAQQTYRELAQSNKLGVGEYVRDSLRVLSTFLHVTCNNEIRPEEVDLRAETNPEPGGGSLSRIIALFSHVLLQLYRKTDRVEAARASPQKPVPTLATLGAM 478          
BLAST of mRNA_Ecto-sp13_S_contig1847.5759.1 vs. uniprot
Match: D7G645_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G645_ECTSI)

HSP 1 Score: 623 bits (1607), Expect = 1.250e-217
Identity = 334/365 (91.51%), Postives = 340/365 (93.15%), Query Frame = 0
Query:   97 MGDPFGGENQATAPPAQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGVDRNVSLLDLNDDENNLRTTCDACTIGKIKCDGGHPCKRCQRRGSECVYREKKRCGPKRRKLSSRDDSDDDGSHGGSIAGHLSEGGGGFRVLTSREQEFLAKFYSSVNKFIPLTCLTVIRDAMNPLPLDVVPGLAASEAEENTYHARKAVLLGCVAVGAVFCGDQASAGAYMSRAQIHLKDCFDALIPEVVSCYLVMVVYHLHFLDRSKVYRYIGFAQQAYRELAQSNKLGVGGYVRDSLRVLSTFLHVTCNNEIRPEEVDLRAETNPEPGGGSLSRIIALFSHVLLQLYRKTDRVEAARASPQKPVPTLATLGAM 461
            MGDPFGGENQATAPPAQP   XXXXXXXXXXXXX              GVDRNVSLLDLNDDENNLRTTCDACTIGKIKCDGGHPCKRCQRRGSECVYREKKRCGPKRRKLSSRDDSDDDGSHGGS AGHL EGG G RVLTSREQEFLAKFYSSVNKFIPLTCLTVIRDAMNPLPLDVVPGLAASEAEENTYHARKAVLLGCVAVGAVFCGDQ+SAGAYMSRAQIHLKDCFDALIPEVVSCYLVMVVYHLHFLDRSKVYRYIGFAQQAYRELAQSNKL VGG+VRDSLRVLSTFLHVTCN EIRP++V LR ETNPEPGGGSLSRIIALFSHVLLQLYRKTDRVEAARASPQ+PVPT+ATLGAM
Sbjct:    1 MGDPFGGENQATAPPAQPQPQXXXXXXXXXXXXXG-------------GVDRNVSLLDLNDDENNLRTTCDACTIGKIKCDGGHPCKRCQRRGSECVYREKKRCGPKRRKLSSRDDSDDDGSHGGSFAGHLGEGGAGVRVLTSREQEFLAKFYSSVNKFIPLTCLTVIRDAMNPLPLDVVPGLAASEAEENTYHARKAVLLGCVAVGAVFCGDQSSAGAYMSRAQIHLKDCFDALIPEVVSCYLVMVVYHLHFLDRSKVYRYIGFAQQAYRELAQSNKLVVGGHVRDSLRVLSTFLHVTCNKEIRPQKVHLRGETNPEPGGGSLSRIIALFSHVLLQLYRKTDRVEAARASPQQPVPTMATLGAM 352          
BLAST of mRNA_Ecto-sp13_S_contig1847.5759.1 vs. uniprot
Match: D7G644_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G644_ECTSI)

HSP 1 Score: 611 bits (1575), Expect = 1.990e-216
Identity = 333/365 (91.23%), Postives = 342/365 (93.70%), Query Frame = 0
Query:   97 MGDPFGGENQATAPPAQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGVDRNVSLLDLNDDENNLRTTCDACTIGKIKCDGGHPCKRCQRRGSECVYREKKRCGPKRRKLSSRDDSDDDGSHGGSIAGHLSEGGGGFRVLTSREQEFLAKFYSSVNKFIPLTCLTVIRDAMNPLPLDVVPGLAASEAEENTYHARKAVLLGCVAVGAVFCGDQASAGAYMSRAQIHLKDCFDALIPEVVSCYLVMVVYHLHFLDRSKVYRYIGFAQQAYRELAQSNKLGVGGYVRDSLRVLSTFLHVTCNNEIRPEEVDLRAETNPEPGGGSLSRIIALFSHVLLQLYRKTDRVEAARASPQKPVPTLATLGAM 461
            M DPFGGENQA APPAQPXXXXXXXXXXXXXXXXXX            GVDRNVSL DLNDDENN RTTCDACT+GKIKCDGGHPC+RCQRRGSECVYREKKRCGPKRRKLSSRDDSDDDG+H GS+AGHL EGG GFRVLTSREQEFLAKFYSSVNKFIPLTC+TVIRDAMNPLPLDVVPGLAASEAEENTYHARKAVLLGCVAVGAVF GDQASAGAYMSRAQIHLKDCFDALIPEVV+CYLVMVVYHLHFLDRSKVYRYIGFAQQA RELAQSNKLGVGG+VRDSLRVLSTFLHVTCN EIRPEEVDLR ETNPEPGGGSLSRIIALFSHVLLQLYRKTDRVEAARASPQ+PVPT+ATLGAM
Sbjct:    1 MEDPFGGENQAGAPPAQPXXXXXXXXXXXXXXXXXXG-----------GVDRNVSLPDLNDDENNFRTTCDACTLGKIKCDGGHPCRRCQRRGSECVYREKKRCGPKRRKLSSRDDSDDDGNHVGSVAGHLGEGGAGFRVLTSREQEFLAKFYSSVNKFIPLTCVTVIRDAMNPLPLDVVPGLAASEAEENTYHARKAVLLGCVAVGAVFSGDQASAGAYMSRAQIHLKDCFDALIPEVVNCYLVMVVYHLHFLDRSKVYRYIGFAQQACRELAQSNKLGVGGHVRDSLRVLSTFLHVTCNKEIRPEEVDLRGETNPEPGGGSLSRIIALFSHVLLQLYRKTDRVEAARASPQQPVPTMATLGAM 354          
BLAST of mRNA_Ecto-sp13_S_contig1847.5759.1 vs. uniprot
Match: A0A835YRF7_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRF7_9STRA)

HSP 1 Score: 168 bits (425), Expect = 9.280e-42
Identity = 108/304 (35.53%), Postives = 160/304 (52.63%), Query Frame = 0
Query:  161 NLRTTCDACTIGKIKCDGGHPCKRCQRRGSECVYREKKR--------------------CGPKRRKLSSRDDSDDDGS------------------HGG--SIAGHLS------EGGGGFRVLTSREQEFLAKFYSSVNKFIPLTCLTVIRDAMNPLPLDVVPGLAAS-----EAEENTYHARKAVLLGCVAVGAVFCGDQASAGAYMSRAQIHLKDCFDALIPEVVSCYLVMVVYHLHFLDRSKVYRYIGFAQQAYRELAQSNKLGVGGYVRDSLRVLSTFLHVTCNNEIRPEEVDLRAETNP 413
            NLRTTCD CT+ K++C+G  PC RC+RR  ECVY EK+R                     G +  K + R  S +DG+                  HG   ++AG  S      +      VL++ EQ FL+ F S++N F+ +     +R+AM P PL  V  LA       E E + +HA KAVLLG VA+GA++C             + HL+DCFDA+IPE  +CYL++V+YH+H LD ++++RY+GFAQQ++ EL+   +      +  ++ +LS  LHV+C++ I  + V   A   P
Sbjct:   82 NLRTTCDGCTVSKVRCNGKKPCARCERRNEECVYSEKRRQKPAGAPRVPVVVTVPPIGAVGGESTKYADRRPSSEDGAPAVTVSAPYPSVHINGAAHGQIPAVAGTPSPQTVPSQQSAAAVVLSADEQRFLSAFLSTINSFMRVASAATLREAMLPAPLLDVTALAMGQTAPREREISRFHACKAVLLGSVALGAMYCXXXXXXXXXXXXXRAHLRDCFDAVIPETAACYLLLVLYHVHVLDSARMFRYMGFAQQSFAELSLQVQ-AANCEISAAIALLSALLHVSCDSAISLDPVADAASAFP 384          
BLAST of mRNA_Ecto-sp13_S_contig1847.5759.1 vs. uniprot
Match: A0A6H5JIQ1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIQ1_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 8.870e-30
Identity = 96/302 (31.79%), Postives = 146/302 (48.34%), Query Frame = 0
Query:  162 LRTTCDACTIGKIKCDGGHPCKRCQRRGSECVYREKKRCGPKRRKLSSRDDSDD------DGSHGGSIAGHLSEGGGGFRVLTSREQEFLAKFYSSVNKFIPLTCL-TVIRDAMNPLPLDVVPGLAAS--------EAEENTYHARKAVLLGCVAVGAVFCGDQASAGAYMSRAQIHLKDCFDALIPEVVSCYLVMVVYHLHFLDRSKVYRYIGFAQQAYRELAQSNKLGVGGYVRDSLRVLSTFLHVTCNNEIRPEEVDLRA----ETNPEPGGGSLSRIIALFSHVLLQLYRKTDRVEAA 444
            LRTTCDACT  K+KC+G  PC RC  +  +C Y  KKRCGPKRRK    D++        DG +G  + G      G    L   E E +  F  ++N F+PLT + TV+R A    P                  E     +HA KA+L G +A+GA F   +  +  +   A+  +K+CFDA  PE+V+ +L++ +Y  H +D SK+ RYIG A Q+   ++ S    V      S+ +    +  +    ++P     RA     +NP        R++ + S+VLL ++ ++ R   A
Sbjct:   27 LRTTCDACTSAKVKCNGEKPCVRCSNKNIQCEYTFKKRCGPKRRKGVPVDNNGGLLAPYPDGVNGSKLVGLNEHLRGEPTTLNKDEVECVDVFMQNINSFLPLTTIDTVMRAAKATAPXXXXXXXXXXXXXXXXXXEERSQFHHAGKAMLHGAIALGAEFLEKEEVSVTHAVAARDQIKECFDAAAPELVAAHLILALYWTHQMDSSKINRYIGLAHQSNNIISDSPGALVASLTFVSVILYDAKVVSSIGCLVKPPGSSNRAGIPSSSNP---AACQERVLNILSYVLLAIHNRSSRSNLA 325          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1847.5759.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5J8L2_9PHAE3.940e-25989.33Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7G645_ECTSI1.250e-21791.51Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7G644_ECTSI1.990e-21691.23Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A835YRF7_9STRA9.280e-4235.53Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5JIQ1_9PHAE8.870e-3031.79Zn(2)-C6 fungal-type domain-containing protein n=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 160..203
e-value: 6.7E-6
score: 35.6
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 165..199
e-value: 1.9E-8
score: 34.3
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 165..192
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 165..194
score: 10.095
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 158..194
e-value: 8.4E-9
score: 37.2
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 160..199
NoneNo IPR availablePANTHERPTHR46910:SF1TRANSCRIPTION FACTOR PDR1coord: 115..210
NoneNo IPR availablePANTHERPTHR46910FAMILY NOT NAMEDcoord: 115..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1847contigEcto-sp13_S_contig1847:3892..14997 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1847.5759.1mRNA_Ecto-sp13_S_contig1847.5759.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1847 3892..14997 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1847.5759.1 ID=prot_Ecto-sp13_S_contig1847.5759.1|Name=mRNA_Ecto-sp13_S_contig1847.5759.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=461bp
MAATGAPSEGSEASRDRRGMVTGQDEYPAELRLKDTLLRAARVGLARHTS
GAGSVDNTKNNNNNNLSSNSSNRSNSNSGGGSNSGNISSGRKNKGHMGDP
FGGENQATAPPAQPQQQQQRQQQQQQQQQQQRGGAPPPPPPPPCGVDRNV
SLLDLNDDENNLRTTCDACTIGKIKCDGGHPCKRCQRRGSECVYREKKRC
GPKRRKLSSRDDSDDDGSHGGSIAGHLSEGGGGFRVLTSREQEFLAKFYS
SVNKFIPLTCLTVIRDAMNPLPLDVVPGLAASEAEENTYHARKAVLLGCV
AVGAVFCGDQASAGAYMSRAQIHLKDCFDALIPEVVSCYLVMVVYHLHFL
DRSKVYRYIGFAQQAYRELAQSNKLGVGGYVRDSLRVLSTFLHVTCNNEI
RPEEVDLRAETNPEPGGGSLSRIIALFSHVLLQLYRKTDRVEAARASPQK
PVPTLATLGAM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf