prot_Ecto-sp13_S_contig18469.5757.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18469.5757.1
Unique Nameprot_Ecto-sp13_S_contig18469.5757.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length328
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18469.5757.1 vs. uniprot
Match: D7G1K5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1K5_ECTSI)

HSP 1 Score: 342 bits (878), Expect = 3.890e-113
Identity = 208/234 (88.89%), Postives = 211/234 (90.17%), Query Frame = 0 
Query:   95 MGAIMVDDPAVILFAGGIGRGGMVVDSNVDVFAVPLDVSEDXXXXXXXXXXXXXXXXXXXEEALVDRDVLSLGVARTDMGAGGTSSAVFFAGGCGMEDVGDNHQQETQSSGPTIVQGXXXXXXGGVAVDVPPGADPDVPLLLKNCQATDAVDVFLLGSGGGGGDGAQQAKGKLSLLPPDAVRLCEPKYAATVGVFFTGSPDEGDPSAWAPTAHVLVAGGIIPTGGGEGGGQYTA 328
            MGA+MVDDPAVILFAGGIGRGGMVVDSNVDVFAVPLDV EDXXXXXXXXXXXXXXXXXX EE LVDRDVLSLGVARTDMGAGGTSSA+FFAGGCGMEDVGD                XXXXXX GVAVDVPPGADPDVPLLLKNCQATDAVDVF LGSGGGG DGAQ+ KGKLSLLPPDAVRLCEPKYAATVGVFFTGSPDEGDPSAWAPTAHVLVAGGIIPTGGGEGGGQYTA
Sbjct:    1 MGAVMVDDPAVILFAGGIGRGGMVVDSNVDVFAVPLDVDEDXXXXXXXXXXXXXXXXXX-EETLVDRDVLSLGVARTDMGAGGTSSAMFFAGGCGMEDVGDXXXXXXXXXXXXXXXXXXXXXXXGVAVDVPPGADPDVPLLLKNCQATDAVDVFFLGSGGGG-DGAQEGKGKLSLLPPDAVRLCEPKYAATVGVFFTGSPDEGDPSAWAPTAHVLVAGGIIPTGGGEGGGQYTA 232
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BLAST of mRNA_Ecto-sp13_S_contig18469.5757.1 vs. uniprot
Match: A0A6H5KCH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCH0_9PHAE)

HSP 1 Score: 268 bits (686), Expect = 6.920e-81
Identity = 137/157 (87.26%), Postives = 142/157 (90.45%), Query Frame = 0 
Query:  173 MGAGGTSSAVFFAGGCGMEDVGDNHQQETQSSGPTIVQGXXXXXXGGVAVDVPPGADPDVPLLLKNCQATDAVDVFLLGSGGGGGDG-AQQAKGKLSLLPPDAVRLCEPKYAATVGVFFTGSPDEGDPSAWAPTAHVLVAGGIIPTGGGEGGGQYTA 328
            MGAGGTSSAVFFAGGCGMEDVGD++QQETQSSGPTIVQ       GGVAVDVPPGADP+VPLLLKNCQATDAVDVFLLGSG       AQ+ KGKLSLLPPDAVRLCEPKYAATVGVFFTGSPDEGDPSAWAPTAHVLVAGGI+PTGGGEGGGQYTA
Sbjct:    1 MGAGGTSSAVFFAGGCGMEDVGDDNQQETQSSGPTIVQDRGGESEGGVAVDVPPGADPNVPLLLKNCQATDAVDVFLLGSGXXXXXXXAQEGKGKLSLLPPDAVRLCEPKYAATVGVFFTGSPDEGDPSAWAPTAHVLVAGGIVPTGGGEGGGQYTA 157
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BLAST of mRNA_Ecto-sp13_S_contig18469.5757.1 vs. uniprot
Match: A0A835ZD19_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD19_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 3.890e-13
Identity = 55/159 (34.59%), Postives = 74/159 (46.54%), Query Frame = 0 
Query:  162 DVLSLGVARTDMGAGGTSSAVFFAGGCGMEDVGDNHQQETQSSGPTIVQGXXXXXXGGVAVDVPPGADP--DVPLLLKNCQATDAVDVFLLGSGGGGGDGAQQAKGKLSLLPPDAVRLCEPKYAATVGVFFTGSPDEGDPSAWAPTAHVLVAGGIIPTG 318
            +V SL + RTDMGA  T++A++  GGCG+                                     +DP  D  LL+ +C+ +D VDVF   +          +   L +       LCEPKYAAT GVF+TG PD+G    WA T HV+VAGGI+  G
Sbjct:   79 EVDSLSMPRTDMGAAVTNAAMYLVGGCGLY------------------------------------SDPIRDGLLLVNDCKPSDLVDVF---APNWTAAARLPSARPLPMQSTQGFHLCEPKYAATTGVFWTGEPDQGMGGPWAQTPHVVVAGGIVSVG 198
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18469.5757.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G1K5_ECTSI3.890e-11388.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KCH0_9PHAE6.920e-8187.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZD19_9STRA3.890e-1334.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..50
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 43..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 51..328
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 33..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18469contigEcto-sp13_S_contig18469:201..3480 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18469.5757.1mRNA_Ecto-sp13_S_contig18469.5757.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18469 201..3480 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18469.5757.1 ID=prot_Ecto-sp13_S_contig18469.5757.1|Name=mRNA_Ecto-sp13_S_contig18469.5757.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=328bp
MRSRHRRPPPLAWRLHVRSSRDGRCLGPFLRDAAAVLLLLWIDQLSLAVA
ADHHTVVTSSTKSCGRRFLVRDGETAAPDSAAAEGLLLSRGRGFMGAIMV
DDPAVILFAGGIGRGGMVVDSNVDVFAVPLDVSEDDDDDDDDDNTTVGAV
GGGGEEALVDRDVLSLGVARTDMGAGGTSSAVFFAGGCGMEDVGDNHQQE
TQSSGPTIVQGGGGESGGGVAVDVPPGADPDVPLLLKNCQATDAVDVFLL
GSGGGGGDGAQQAKGKLSLLPPDAVRLCEPKYAATVGVFFTGSPDEGDPS
AWAPTAHVLVAGGIIPTGGGEGGGQYTA
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